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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
524.0
nTPM
FANTOM5:
338.7
Scaled Tags Per Million
Pig:
778.5
nTPM
Allen mouse:
3.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
524.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 497.2
2090
Male, age 80, both hemispheres
557.7
2188
Female, age 91, both hemispheres
555.7
2301
Female, age 85, both hemispheres
507.1
1984
Male, age 76, both hemispheres
368.2
Dorsal cochlear nucleus nTPM: 476.1
2802
Male, age 74, right hemisphere
521.7
2187
Female, age 91, both hemispheres
501.4
2378
Male, age 80, both hemispheres
492.3
2370
Male, age 61, both hemispheres
477.9
2058
Male, age 76, both hemispheres
386.9
Dorsal tegmental nucleus nTPM: 470.2
2358
Male, age 61, both hemispheres
508.3
2326
Male, age 74, both hemispheres
499.1
2083
Male, age 80, both hemispheres
474.8
1936
Male, age 76, left hemisphere
398.6
Dorsolateral tegmental area nTPM: 493.0
2337
Male, age 61, both hemispheres
637.9
2654
Male, age 80, both hemispheres
546.2
2751
Female, age 85, both hemispheres
470.8
2360
Male, age 74, both hemispheres
450.8
2141
Male, age 76, both hemispheres
359.4
Kolliker-Fuse nucleus nTPM: 484.1
2315
Male, age 76, right hemisphere
559.1
2793
Female, age 91, left hemisphere
466.4
2163
Male, age 80, both hemispheres
426.9
Lateral lemniscal nuclei nTPM: 363.2
2746
Female, age 85, left hemisphere
415.2
2320
Female, age 91, left hemisphere
373.1
2169
Male, age 76, both hemispheres
357.0
2453
Male, age 74, right hemisphere
349.8
2036
Male, age 80, both hemispheres
321.1
Lateral parabrachial nucleus nTPM: 488.1
2792
Male, age 76, both hemispheres
591.5
2013
Male, age 80, both hemispheres
555.1
2139
Female, age 85, right hemisphere
433.7
2790
Male, age 61, both hemispheres
372.2
Lateral vestibular nucleus nTPM: 428.6
2311
Male, age 80, both hemispheres
501.9
2184
Male, age 76, both hemispheres
355.3
Locus coeruleus nTPM: 394.6
2162
Male, age 80, both hemispheres
429.1
2014
Male, age 55, unknown
426.0
2123
Female, age 91, both hemispheres
405.8
2720
Male, age 74, both hemispheres
395.1
2317
Female, age 72, unknown
386.6
1980
Male, age 76, both hemispheres
379.1
2788
Male, age 74, unknown
340.4
Medial parabrachial nucleus nTPM: 438.5
2170
Female, age 91, both hemispheres
561.6
2463
Female, age 85, right hemisphere
449.7
2854
Male, age 80, both hemispheres
409.9
2786
Male, age 76, both hemispheres
390.0
2156
Male, age 61, both hemispheres
381.3
Medial periolivary nuclei nTPM: 402.8
2081
Male, age 80, both hemispheres
467.4
2063
Male, age 76, both hemispheres
435.5
2458
Female, age 91, both hemispheres
406.5
2791
Male, age 74, right hemisphere
386.8
2171
Female, age 85, both hemispheres
317.6
Motor facial nucleus nTPM: 386.3
2126
Male, age 61, both hemispheres
480.6
2062
Male, age 76, both hemispheres
410.3
2365
Male, age 74, right hemisphere
400.1
2795
Female, age 91, both hemispheres
383.5
2697
Female, age 85, both hemispheres
368.4
2327
Male, age 80, both hemispheres
275.0
Motor trigeminal nucleus nTPM: 411.7
2335
Male, age 61, both hemispheres
458.0
2321
Female, age 91, both hemispheres
422.3
2560
Male, age 74, both hemispheres
414.0
2309
Male, age 76, both hemispheres
388.5
2079
Male, age 80, both hemispheres
375.8
Nuclei of the trapezoid body nTPM: 393.2
1983
Male, age 76, both hemispheres
523.7
2166
Male, age 80, both hemispheres
390.6
2159
Male, age 61, both hemispheres
369.8
2368
Female, age 91, both hemispheres
363.0
2735
Female, age 85, both hemispheres
318.7
Nucleus raphe magnus nTPM: 363.0
2051
Male, age 76, both hemispheres
419.2
2459
Female, age 91, both hemispheres
397.9
2455
Male, age 74, both hemispheres
376.3
2328
Male, age 80, both hemispheres
336.0
2160
Male, age 61, both hemispheres
330.3
2172
Female, age 85, both hemispheres
318.5
Paramedian reticular nucleus nTPM: 453.5
2052
Male, age 76, both hemispheres
483.7
2057
Male, age 80, both hemispheres
476.6
2313
Male, age 61, both hemispheres
464.7
2050
Female, age 85, both hemispheres
388.9
Pedunculopontine tegmental nucleus nTPM: 433.3
2338
Male, age 61, both hemispheres
518.1
2334
Male, age 80, both hemispheres
448.8
1921
Female, age 85, both hemispheres
333.0
Pontine nuclei nTPM: 415.4
2319
Female, age 91, both hemispheres
494.6
2115
Male, age 80, left hemisphere
448.7
1968
Male, age 76, left hemisphere
434.4
2454
Male, age 74, left hemisphere
420.4
2109
Female, age 72, unknown
410.7
2727
Male, age 61, right hemisphere
387.6
1863
Male, age 55, unknown
383.9
2787
Female, age 85, both hemispheres
343.1
Pontine raphe nucleus nTPM: 370.0
2853
Male, age 76, midline
385.8
2122
Female, age 85, midline
354.2
Posteroventral cochlear nucleus nTPM: 524.0
2341
Male, age 80, both hemispheres
638.3
2135
Female, age 91, both hemispheres
605.5
2371
Male, age 61, both hemispheres
541.8
2070
Male, age 76, both hemispheres
421.3
2752
Female, age 85, both hemispheres
413.1
Principal sensory trigeminal nucleus nTPM: 370.8
2367
Female, age 91, left hemisphere
437.3
2158
Male, age 61, both hemispheres
386.6
2324
Male, age 76, both hemispheres
344.9
2008
Male, age 80, left hemisphere
314.3
Reticular pontine nucleus, caudal nTPM: 413.8
2559
Male, age 74, both hemispheres
490.6
2092
Male, age 76, both hemispheres
443.8
2457
Female, age 91, both hemispheres
442.4
2332
Male, age 80, right hemisphere
278.4
Reticular pontine nucleus, oral nTPM: 417.6
2366
Female, age 91, both hemispheres
458.8
1939
Male, age 80, both hemispheres
436.5
2167
Male, age 76, both hemispheres
423.3
2361
Male, age 74, both hemispheres
399.1
2012
Female, age 85, both hemispheres
370.2
Reticulotegmental nucleus nTPM: 403.3
2452
Male, age 74, both hemispheres
483.1
2322
Female, age 91, both hemispheres
404.7
2333
Male, age 80, both hemispheres
382.5
2325
Male, age 76, both hemispheres
342.8
Spinal trigeminal nucleus, oral nTPM: 394.9
2164
Male, age 80, both hemispheres
430.0
1978
Male, age 76, both hemispheres
399.8
2737
Female, age 85, both hemispheres
354.9
Subcoeruleus area nTPM: 413.6
2451
Male, age 74, both hemispheres
499.2
2369
Female, age 85, left hemisphere
476.6
1958
Male, age 80, both hemispheres
387.1
2089
Male, age 76, left hemisphere
364.9
2323
Female, age 91, left hemisphere
340.1
Superior olive nTPM: 400.8
2020
Male, age 76, both hemispheres
493.5
2364
Male, age 74, right hemisphere
433.7
2561
Female, age 91, both hemispheres
421.5
2329
Male, age 80, right hemisphere
332.1
1875
Female, age 85, both hemispheres
323.0
Ventral periolivary nuclei nTPM: 394.4
2023
Male, age 76, both hemispheres
511.0
2794
Female, age 91, left hemisphere
393.3
2165
Male, age 80, both hemispheres
371.1
2130
Female, age 85, both hemispheres
302.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 407.7
2359
Male, age 61, both hemispheres
465.5
2161
Male, age 80, both hemispheres
427.0
2456
Female, age 91, both hemispheres
413.7
1959
Male, age 76, both hemispheres
410.7
2840
Female, age 85, both hemispheres
388.1
2449
Male, age 74, both hemispheres
341.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
778.5
Pig sample
Sample description
nTPM
Pons nTPM: 778.5
Samples: 4
Max nTPM: 935.6
Min nTPM: 480.3
Sample A
Female
841.4
Sample B
Female
480.3
Sample C
Male
856.6
Sample D
Male
935.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
