PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:592.5 nTPM
FANTOM5:338.7 Scaled Tags Per Million
Pig:904.7 nTPM
Mouse:29.2 nTPM
Allen mouse:3.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 592.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 497.2
2090 Male, age 80, both hemispheres 557.7
2188 Female, age 91, both hemispheres 555.7
2301 Female, age 85, both hemispheres 507.1
1984 Male, age 76, both hemispheres 368.2
Area postrema
nTPM: 499.2
2306 Male, age 80, both hemispheres 576.3
2799 Male, age 61, both hemispheres 534.8
2054 Male, age 76, both hemispheres 386.6
Dorsal cochlear nucleus
nTPM: 476.1
2802 Male, age 74, right hemisphere 521.7
2187 Female, age 91, both hemispheres 501.4
2378 Male, age 80, both hemispheres 492.3
2370 Male, age 61, both hemispheres 477.9
2058 Male, age 76, both hemispheres 386.9
Dorsal medullary reticular nucleus
nTPM: 442.1
2373 Male, age 61, both hemispheres 489.6
2040 Female, age 85, both hemispheres 445.2
2088 Male, age 76, both hemispheres 391.5
Dorsal motor vagal complex
nTPM: 478.9
2797 Male, age 61, both hemispheres 665.7
2807 Female, age 85, both hemispheres 547.7
2643 Male, age 74, both hemispheres 511.8
2000 Male, age 74, unknown 443.6
2133 Female, age 91, both hemispheres 443.1
2844 Male, age 55, unknown 437.2
2813 Female, age 72, unknown 409.1
2185 Male, age 76, both hemispheres 373.4
Dorsal tegmental nucleus
nTPM: 470.2
2358 Male, age 61, both hemispheres 508.3
2326 Male, age 74, both hemispheres 499.1
2083 Male, age 80, both hemispheres 474.8
1936 Male, age 76, left hemisphere 398.6
Dorsolateral tegmental area
nTPM: 493.0
2337 Male, age 61, both hemispheres 637.9
2654 Male, age 80, both hemispheres 546.2
2751 Female, age 85, both hemispheres 470.8
2360 Male, age 74, both hemispheres 450.8
2141 Male, age 76, both hemispheres 359.4
Gigantocellular reticular nuclei, medullary
nTPM: 438.5
2314 Male, age 61, both hemispheres 544.9
2387 Female, age 91, both hemispheres 496.8
1876 Female, age 85, both hemispheres 431.3
2310 Male, age 80, both hemispheres 413.4
2022 Male, age 76, right hemisphere 393.0
2462 Male, age 74, both hemispheres 351.6
Gigantocellular reticular nuclei, pars
nTPM: 373.7
2084 Female, age 85, both hemispheres 411.4
2336 Male, age 61, both hemispheres 407.1
2706 Male, age 80, both hemispheres 378.6
2330 Male, age 80, both hemispheres 343.7
2168 Male, age 76, both hemispheres 327.7
Inferior olive
nTPM: 532.2
2085 Female, age 85, both hemispheres 548.2
2178 Male, age 61, both hemispheres 547.3
2563 Male, age 74, both hemispheres 546.3
2379 Male, age 80, both hemispheres 541.1
2628 Female, age 91, both hemispheres 478.1
Kolliker-Fuse nucleus
nTPM: 484.1
2315 Male, age 76, right hemisphere 559.1
2793 Female, age 91, left hemisphere 466.4
2163 Male, age 80, both hemispheres 426.9
Lateral lemniscal nuclei
nTPM: 363.2
2746 Female, age 85, left hemisphere 415.2
2320 Female, age 91, left hemisphere 373.1
2169 Male, age 76, both hemispheres 357.0
2453 Male, age 74, right hemisphere 349.8
2036 Male, age 80, both hemispheres 321.1
Lateral medullary reticular nucleus
nTPM: 532.5
2852 Male, age 80, both hemispheres 647.3
2190 Female, age 85, both hemispheres 563.8
2305 Male, age 74, both hemispheres 544.0
2804 Female, age 91, both hemispheres 511.6
2374 Male, age 61, both hemispheres 501.2
2044 Male, age 76, both hemispheres 426.8
Lateral parabrachial nucleus
nTPM: 488.1
2792 Male, age 76, both hemispheres 591.5
2013 Male, age 80, both hemispheres 555.1
2139 Female, age 85, right hemisphere 433.7
2790 Male, age 61, both hemispheres 372.2
Lateral vestibular nucleus
nTPM: 428.6
2311 Male, age 80, both hemispheres 501.9
2184 Male, age 76, both hemispheres 355.3
Locus coeruleus
nTPM: 394.6
2162 Male, age 80, both hemispheres 429.1
2014 Male, age 55, unknown 426.0
2123 Female, age 91, both hemispheres 405.8
2720 Male, age 74, both hemispheres 395.1
2317 Female, age 72, unknown 386.6
1980 Male, age 76, both hemispheres 379.1
2788 Male, age 74, unknown 340.4
Medial olivary nucleus
nTPM: 592.5
1962 Male, age 76, both hemispheres 692.0
1943 Male, age 61, both hemispheres 671.8
2138 Female, age 91, both hemispheres 519.0
2851 Male, age 80, both hemispheres 487.2
Medial parabrachial nucleus
nTPM: 438.5
2170 Female, age 91, both hemispheres 561.6
2463 Female, age 85, right hemisphere 449.7
2854 Male, age 80, both hemispheres 409.9
2786 Male, age 76, both hemispheres 390.0
2156 Male, age 61, both hemispheres 381.3
Medial periolivary nuclei
nTPM: 402.8
2081 Male, age 80, both hemispheres 467.4
2063 Male, age 76, both hemispheres 435.5
2458 Female, age 91, both hemispheres 406.5
2791 Male, age 74, right hemisphere 386.8
2171 Female, age 85, both hemispheres 317.6
Medial vestibular nucleus
nTPM: 430.8
2624 Male, age 61, both hemispheres 472.5
2803 Female, age 91, both hemispheres 466.5
2801 Male, age 74, both hemispheres 441.2
2093 Male, age 80, both hemispheres 425.8
2743 Female, age 85, both hemispheres 415.8
2134 Male, age 76, both hemispheres 362.8
Motor facial nucleus
nTPM: 386.3
2126 Male, age 61, both hemispheres 480.6
2062 Male, age 76, both hemispheres 410.3
2365 Male, age 74, right hemisphere 400.1
2795 Female, age 91, both hemispheres 383.5
2697 Female, age 85, both hemispheres 368.4
2327 Male, age 80, both hemispheres 275.0
Motor hypoglossal nucleus
nTPM: 447.2
2182 Male, age 80, both hemispheres 547.6
2132 Female, age 85, both hemispheres 494.9
2125 Female, age 91, both hemispheres 466.4
2277 Male, age 76, both hemispheres 392.8
2461 Male, age 61, both hemispheres 334.2
Motor trigeminal nucleus
nTPM: 411.7
2335 Male, age 61, both hemispheres 458.0
2321 Female, age 91, both hemispheres 422.3
2560 Male, age 74, both hemispheres 414.0
2309 Male, age 76, both hemispheres 388.5
2079 Male, age 80, both hemispheres 375.8
Nuclei of the trapezoid body
nTPM: 393.2
1983 Male, age 76, both hemispheres 523.7
2166 Male, age 80, both hemispheres 390.6
2159 Male, age 61, both hemispheres 369.8
2368 Female, age 91, both hemispheres 363.0
2735 Female, age 85, both hemispheres 318.7
Nucleus ambiguus
nTPM: 480.7
2071 Male, age 76, both hemispheres 607.4
2096 Female, age 85, both hemispheres 354.0
Nucleus cuneatus
nTPM: 471.7
2808 Female, age 85, both hemispheres 607.9
2380 Male, age 80, both hemispheres 564.7
2805 Female, age 91, both hemispheres 505.0
2381 Male, age 80, both hemispheres 497.0
2376 Male, age 61, both hemispheres 492.0
2564 Male, age 74, both hemispheres 478.4
2562 Male, age 61, both hemispheres 429.8
2100 Male, age 76, both hemispheres 348.3
2131 Male, age 76, both hemispheres 322.3
Nucleus gracilis
nTPM: 529.4
2382 Male, age 80, both hemispheres 576.4
2299 Female, age 85, both hemispheres 517.3
2627 Male, age 74, both hemispheres 494.5
Nucleus raphe magnus
nTPM: 363.0
2051 Male, age 76, both hemispheres 419.2
2459 Female, age 91, both hemispheres 397.9
2455 Male, age 74, both hemispheres 376.3
2328 Male, age 80, both hemispheres 336.0
2160 Male, age 61, both hemispheres 330.3
2172 Female, age 85, both hemispheres 318.5
Nucleus raphe obscurus
nTPM: 580.0
2142 Male, age 76, midline 636.7
2845 Female, age 85, midline 572.1
2800 Male, age 61, midline 531.3
Nucleus raphe pallidus
nTPM: 575.6
1924 Male, age 61, midline 666.6
2145 Male, age 76, midline 563.8
2183 Male, age 80, midline 496.2
Nucleus tractus solitarii
nTPM: 407.9
2191 Female, age 85, both hemispheres 492.9
2144 Female, age 91, right hemisphere 470.2
2656 Male, age 76, both hemispheres 343.4
2307 Male, age 80, both hemispheres 324.9
Paramedian reticular nucleus
nTPM: 453.5
2052 Male, age 76, both hemispheres 483.7
2057 Male, age 80, both hemispheres 476.6
2313 Male, age 61, both hemispheres 464.7
2050 Female, age 85, both hemispheres 388.9
Parvicellular reticular nuclei
nTPM: 425.3
2119 Male, age 80, both hemispheres 465.1
2095 Male, age 76, both hemispheres 438.2
2558 Male, age 74, both hemispheres 372.6
Parvicellular reticular nuclei, medullary
nTPM: 414.0
2091 Female, age 85, both hemispheres 432.3
2189 Female, age 91, both hemispheres 425.0
2181 Male, age 80, left hemisphere 384.6
Pedunculopontine tegmental nucleus
nTPM: 433.3
2338 Male, age 61, both hemispheres 518.1
2334 Male, age 80, both hemispheres 448.8
1921 Female, age 85, both hemispheres 333.0
Peritrigeminal nucleus
nTPM: 533.6
2067 Female, age 85, both hemispheres 655.3
2136 Male, age 76, both hemispheres 518.1
2179 Male, age 61, both hemispheres 427.4
Pontine nuclei
nTPM: 415.4
2319 Female, age 91, both hemispheres 494.6
2115 Male, age 80, left hemisphere 448.7
1968 Male, age 76, left hemisphere 434.4
2454 Male, age 74, left hemisphere 420.4
2109 Female, age 72, unknown 410.7
2727 Male, age 61, right hemisphere 387.6
1863 Male, age 55, unknown 383.9
2787 Female, age 85, both hemispheres 343.1
Pontine raphe nucleus
nTPM: 370.0
2853 Male, age 76, midline 385.8
2122 Female, age 85, midline 354.2
Posteroventral cochlear nucleus
nTPM: 524.0
2341 Male, age 80, both hemispheres 638.3
2135 Female, age 91, both hemispheres 605.5
2371 Male, age 61, both hemispheres 541.8
2070 Male, age 76, both hemispheres 421.3
2752 Female, age 85, both hemispheres 413.1
Prepositus hypoglossal nucleus
nTPM: 501.4
2855 Female, age 85, right hemisphere 540.9
2086 Male, age 80, both hemispheres 461.9
Principal sensory trigeminal nucleus
nTPM: 370.8
2367 Female, age 91, left hemisphere 437.3
2158 Male, age 61, both hemispheres 386.6
2324 Male, age 76, both hemispheres 344.9
2008 Male, age 80, left hemisphere 314.3
Reticular pontine nucleus, caudal
nTPM: 413.8
2559 Male, age 74, both hemispheres 490.6
2092 Male, age 76, both hemispheres 443.8
2457 Female, age 91, both hemispheres 442.4
2332 Male, age 80, right hemisphere 278.4
Reticular pontine nucleus, oral
nTPM: 417.6
2366 Female, age 91, both hemispheres 458.8
1939 Male, age 80, both hemispheres 436.5
2167 Male, age 76, both hemispheres 423.3
2361 Male, age 74, both hemispheres 399.1
2012 Female, age 85, both hemispheres 370.2
Reticulotegmental nucleus
nTPM: 403.3
2452 Male, age 74, both hemispheres 483.1
2322 Female, age 91, both hemispheres 404.7
2333 Male, age 80, both hemispheres 382.5
2325 Male, age 76, both hemispheres 342.8
Spinal trigeminal nucleus, caudal
nTPM: 420.5
2308 Male, age 80, both hemispheres 448.7
2312 Male, age 61, both hemispheres 444.1
2642 Male, age 74, both hemispheres 431.7
2447 Male, age 76, both hemispheres 392.4
2390 Female, age 91, both hemispheres 385.5
Spinal trigeminal nucleus, interpolar
nTPM: 425.6
2033 Male, age 80, both hemispheres 492.8
2386 Female, age 85, both hemispheres 444.8
2389 Female, age 91, both hemispheres 410.7
2066 Male, age 76, right hemisphere 408.4
2625 Male, age 61, both hemispheres 371.2
Spinal trigeminal nucleus, oral
nTPM: 394.9
2164 Male, age 80, both hemispheres 430.0
1978 Male, age 76, both hemispheres 399.8
2737 Female, age 85, both hemispheres 354.9
Spinal vestibular nucleus
nTPM: 503.5
2384 Male, age 74, both hemispheres 621.0
2780 Male, age 80, both hemispheres 519.1
2806 Female, age 85, both hemispheres 500.9
2796 Male, age 61, both hemispheres 489.9
2748 Male, age 76, both hemispheres 452.1
2186 Female, age 91, both hemispheres 437.7
Subcoeruleus area
nTPM: 413.6
2451 Male, age 74, both hemispheres 499.2
2369 Female, age 85, left hemisphere 476.6
1958 Male, age 80, both hemispheres 387.1
2089 Male, age 76, left hemisphere 364.9
2323 Female, age 91, left hemisphere 340.1
Superior olive
nTPM: 400.8
2020 Male, age 76, both hemispheres 493.5
2364 Male, age 74, right hemisphere 433.7
2561 Female, age 91, both hemispheres 421.5
2329 Male, age 80, right hemisphere 332.1
1875 Female, age 85, both hemispheres 323.0
Superior vestibular nucleus
nTPM: 490.5
2015 Male, age 80, both hemispheres 523.5
2383 Male, age 74, both hemispheres 501.7
2061 Male, age 76, both hemispheres 446.2
Ventral medullary reticular nucleus
nTPM: 472.0
2372 Male, age 61, both hemispheres 532.8
2060 Male, age 76, both hemispheres 411.1
Ventral periolivary nuclei
nTPM: 394.4
2023 Male, age 76, both hemispheres 511.0
2794 Female, age 91, left hemisphere 393.3
2165 Male, age 80, both hemispheres 371.1
2130 Female, age 85, both hemispheres 302.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 533.5
2118 Male, age 80, both hemispheres 612.4
2302 Female, age 91, both hemispheres 578.2
2741 Female, age 85, both hemispheres 518.6
1986 Male, age 76, both hemispheres 495.6
2180 Male, age 61, both hemispheres 462.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 407.7
2359 Male, age 61, both hemispheres 465.5
2161 Male, age 80, both hemispheres 427.0
2456 Female, age 91, both hemispheres 413.7
1959 Male, age 76, both hemispheres 410.7
2840 Female, age 85, both hemispheres 388.1
2449 Male, age 74, both hemispheres 341.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 338.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 338.7
FF:10182-103D2 60 years, female 346.1
FF:10165-103B3 76 years, female 331.3
Medulla oblongata
Scaled Tags Per Million: 335.9
FF:10174-103C3 60 years, female 408.0
FF:10038-101F2 18-64 years, mixed 301.0
FF:10155-103A2 76 years, female 298.8
Pons
Scaled Tags Per Million: 212.0
FF:10033-101E6 18-54 years, mixed 212.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 904.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 904.7
Samples: 4

Max nTPM: 1164.3
Min nTPM: 639.2
Sample A Female 813.9
Sample B Female 639.2
Sample C Male 1001.4
Sample D Male 1164.3
Pons
nTPM: 778.5
Samples: 4

Max nTPM: 935.6
Min nTPM: 480.3
Sample A Female 841.4
Sample B Female 480.3
Sample C Male 856.6
Sample D Male 935.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 29.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 29.2
Samples: 4

Max nTPM: 33.5
Min nTPM: 25.8
Sample A Male 33.5
Sample B Male 25.8
Sample C Female 30.0
Sample D Female 27.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.6
69873289 Antisense, RP_050510_04_H11, Mouse strain C57BL/6J (56 days, male) 6.9
70795718 Antisense, RP_050712_01_H01, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 3.2
69873289 Antisense, RP_050510_04_H11, Mouse strain C57BL/6J (56 days, male) 6.4
70795718 Antisense, RP_050712_01_H01, Mouse strain C57BL/6J (56 days, male) 0.0

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