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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:212.8 nTPM
HPA Brain:177.7 nTPM
GTEx:212.8 nTPM
FANTOM5:422.5 Scaled Tags Per Million
Pig:120.0 nTPM
Mouse:166.9 nTPM
Allen mouse:2.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB002490
Glial cells Medium
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 84.4
2288 Male, age 75, left hemisphere 131.4
2481 Female, age 94, left hemisphere 108.7
2846 Female, age 79, unknown 92.7
2290 Female, age 72, unknown 80.4
1854 Male, age 80, left hemisphere 74.0
1781 Male, age 74, unknown 71.0
2289 Male, age 61, right hemisphere 62.8
1857 Female, age 85, left hemisphere 54.1
Globus pallidus, externus
nTPM: 151.1
1996 Male, age 80, right hemisphere 234.5
2772 Female, age 79, unknown 182.3
2395 Male, age 75, both hemispheres 148.7
2646 Male, age 61, right hemisphere 108.4
2567 Female, age 72, unknown 81.4
Globus pallidus, internus
nTPM: 177.7
2111 Female, age 85, right hemisphere 231.5
1818 Male, age 74, unknown 188.5
2778 Female, age 91, both hemispheres 185.0
2037 Male, age 80, right hemisphere 183.3
2287 Male, age 75, right hemisphere 182.6
2483 Female, age 94, right hemisphere 141.0
2566 Female, age 72, unknown 132.0
Nucleus accumbens
nTPM: 93.7
2391 Female, age 94, left hemisphere 162.7
2286 Male, age 75, left hemisphere 132.3
2732 Male, age 80, right hemisphere 123.1
2698 Female, age 72, unknown 97.7
1806 Female, age 85, left hemisphere 80.1
1783 Male, age 74, unknown 69.7
2824 Male, age 61, right hemisphere 50.5
1856 Female, age 91, right hemisphere 33.8
Nucleus basalis of Meynert
nTPM: 95.8
2484 Female, age 94, left hemisphere 109.3
2393 Male, age 80, right hemisphere 97.6
2569 Male, age 61, both hemispheres 91.6
2821 Male, age 75, both hemispheres 84.9
Nucleus of the diagonal band
nTPM: 26.7
1812 Female, age 91, both hemispheres 44.5
1979 Male, age 74, unknown 32.0
2029 Male, age 61, right hemisphere 22.0
2775 Male, age 80, right hemisphere 18.1
2195 Female, age 85, both hemispheres 17.1
Putamen
nTPM: 87.7
2482 Female, age 94, left hemisphere 148.0
1829 Male, age 74, unknown 113.4
2466 Female, age 79, unknown 83.9
2489 Female, age 72, unknown 79.6
1937 Female, age 91, right hemisphere 78.8
2647 Male, age 75, left hemisphere 61.0
1838 Male, age 80, right hemisphere 49.4
Septal nuclei
nTPM: 52.4
2394 Male, age 61, left hemisphere 109.9
2199 Male, age 80, right hemisphere 70.3
2629 Female, age 94, right hemisphere 56.3
2059 Female, age 85, both hemispheres 42.8
2009 Female, age 91, both hemispheres 36.9
2031 Female, age 72, unknown 33.5
1960 Male, age 74, unknown 17.2
Stria terminalis, bed nucleus
nTPM: 38.7
2201 Male, age 74, unknown 45.0
1974 Female, age 91, both hemispheres 44.3
2486 Female, age 94, both hemispheres 26.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 152.7
Samples: 246

Max nTPM: 376.1
Min nTPM: 36.8
Std nTPM: 63.9
Median nTPM: 140.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 376.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 349.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 339.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 327.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 324.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 309.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 302.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 297.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 289.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 288.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 283.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 275.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 261.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 260.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 255.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 254.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 253.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 249.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 248.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 246.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 246.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 246.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 244.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 244.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 242.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 242.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 241.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 240.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 236.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 236.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 233.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 233.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 231.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 230.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 230.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 228.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 227.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 223.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 219.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 219.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 217.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 217.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 216.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 213.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 212.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 210.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 210.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 208.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 208.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 207.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 206.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 205.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 203.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 203.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 201.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 200.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 196.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 194.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 192.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 190.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 187.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 187.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 186.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 186.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 185.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 183.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 182.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 182.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 182.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 181.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 181.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 181.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 178.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 178.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 177.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 177.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 176.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 176.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 175.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 175.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 174.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 173.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 171.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 170.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 170.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 170.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 168.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 168.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 168.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 167.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 167.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 166.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 166.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 165.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 163.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 163.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 161.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 160.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 160.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 158.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 158.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 157.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 157.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 156.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 154.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 154.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 154.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 153.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 152.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 152.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 151.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 149.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 149.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 148.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 147.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 145.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 143.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 142.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 142.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 141.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 140.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 140.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 140.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 139.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 138.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 138.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 137.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 134.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 133.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 132.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 132.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 131.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 131.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 129.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 129.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 129.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 128.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 128.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 128.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 125.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 125.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 124.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 124.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 122.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 122.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 122.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 121.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 121.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 120.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 120.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 120.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 118.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 118.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 116.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 116.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 115.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 115.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 114.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 113.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 113.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 112.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 112.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 111.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 111.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 111.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 111.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 111.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 111.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 110.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 109.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 108.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 107.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 107.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 107.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 107.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 106.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 106.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 106.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 105.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 104.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 104.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 103.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 101.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 101.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 100.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 100.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 100.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 99.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 98.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 97.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 97.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 96.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 95.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 94.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 93.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 92.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 92.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 91.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 90.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 90.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 90.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 89.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 88.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 86.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 85.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 85.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 83.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 82.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 80.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 78.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 78.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 75.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 74.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 73.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 73.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 73.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 71.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 69.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 65.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 61.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 57.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 55.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 52.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 41.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 36.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 74.0
Samples: 246

Max nTPM: 529.7
Min nTPM: 19.4
Std nTPM: 51.2
Median nTPM: 61.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 529.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 276.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 240.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 226.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 217.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 203.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 188.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 184.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 182.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 173.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 168.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 165.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 165.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 151.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 149.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 148.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 143.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 142.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 141.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 141.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 140.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 134.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 131.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 130.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 129.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 127.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 127.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 124.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 120.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 117.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 116.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 115.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 113.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 113.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 111.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 110.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 109.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 109.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 109.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 108.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 107.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 107.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 107.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 106.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 104.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 103.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 103.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 102.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 101.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 100.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 100.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 99.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 99.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 96.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 96.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 96.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 93.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 92.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 92.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 92.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 90.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 89.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 88.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 88.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 88.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 87.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 87.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 86.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 85.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 85.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 84.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 84.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 84.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 81.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 81.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 80.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 79.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 77.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 77.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 77.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 77.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 76.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 75.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 75.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 75.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 74.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 74.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 74.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 74.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 73.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 73.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 73.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 73.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 71.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 71.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 70.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 70.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 69.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 68.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 68.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 67.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 67.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 67.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 66.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 66.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 66.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 65.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 65.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 65.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 64.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 64.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 64.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 64.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 64.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 64.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 64.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 64.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 63.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 62.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 62.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 62.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 62.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 62.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 61.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 61.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 61.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 60.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 58.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 58.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 58.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 57.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 57.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 57.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 56.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 56.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 56.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 56.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 55.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 55.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 55.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 55.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 55.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 54.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 54.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 54.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 53.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 53.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 52.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 52.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 52.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 52.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 51.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 50.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 50.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 50.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 49.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 49.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 49.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 49.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 48.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 47.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 47.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 46.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 46.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 46.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 46.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 45.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 45.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 45.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 45.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 45.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 44.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 44.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 43.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 42.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 42.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 41.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 41.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 41.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 41.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 40.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 40.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 40.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 40.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 40.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 39.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 39.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 39.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 39.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 39.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 39.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 39.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 38.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 38.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 38.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 38.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 38.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 37.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 37.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 37.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 36.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 36.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 35.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 35.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 35.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 35.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 34.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 34.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 33.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 33.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 33.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 32.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 32.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 31.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 31.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 31.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 30.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 30.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 29.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 28.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 28.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 28.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 28.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 28.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 27.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 27.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 26.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 26.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 25.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 25.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 24.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 24.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 23.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 23.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 23.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 22.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 21.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 19.4
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Brain - Putamen (basal ganglia)
Average nTPM: 212.8
Samples: 205

Max nTPM: 689.1
Min nTPM: 49.5
Std nTPM: 82.1
Median nTPM: 206.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 689.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 522.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 486.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 391.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 377.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 363.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 362.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 360.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 357.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 355.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 353.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 347.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 339.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 334.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 331.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 331.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 331.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 320.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 316.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 315.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 313.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 307.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 307.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 304.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 303.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 301.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 299.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 292.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 292.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 291.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 291.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 287.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 286.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 280.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 280.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 278.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 276.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 273.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 271.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 270.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 270.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 269.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 268.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 268.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 260.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 257.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 256.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 255.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 255.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 254.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 252.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 251.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 251.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 251.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 250.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 248.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 248.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 246.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 246.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 246.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 244.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 244.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 241.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 240.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 238.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 238.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 238.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 236.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 236.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 235.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 234.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 233.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 233.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 231.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 231.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 229.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 228.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 228.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 228.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 227.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 224.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 223.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 221.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 221.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 220.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 220.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 219.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 219.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 218.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 218.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 216.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 215.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 214.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 214.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 213.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 213.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 212.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 212.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 211.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 209.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 209.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 207.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 206.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 204.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 202.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 201.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 199.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 199.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 193.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 193.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 193.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 192.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 192.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 190.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 189.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 188.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 188.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 188.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 187.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 185.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 185.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 184.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 184.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 184.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 183.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 182.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 182.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 181.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 179.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 177.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 177.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 175.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 175.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 175.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 173.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 173.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 172.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 172.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 171.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 171.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 171.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 170.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 170.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 170.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 170.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 169.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 169.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 167.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 165.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 165.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 162.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 161.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 159.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 159.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 158.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 157.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 156.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 155.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 155.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 150.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 149.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 145.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 144.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 143.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 142.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 142.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 140.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 138.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 136.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 135.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 133.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 133.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 132.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 132.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 132.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 132.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 131.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 130.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 129.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 128.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 128.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 128.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 126.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 124.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 122.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 119.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 118.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 118.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 117.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 114.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 112.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 108.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 107.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 104.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 103.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 101.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 98.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 98.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 95.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 95.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 83.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 83.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 74.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 67.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 49.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

422.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 115.4
FF:10164-103B2 76 years, female 115.4
Nucleus accumbens
Scaled Tags Per Million: 166.7
FF:10037-101F1 23-56 years, mixed 166.7
Putamen
Scaled Tags Per Million: 89.5
FF:10176-103C5 60 years, female 89.5
Globus pallidus
Scaled Tags Per Million: 422.5
FF:10175-103C4 60 years, female 524.2
FF:10161-103A8 76 years, female 320.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.0
Pig sample Sample description nTPM
Caudate
nTPM: 56.5
Samples: 4

Max nTPM: 65.9
Min nTPM: 49.3
Sample A Female 65.9
Sample B Female 49.3
Sample C Male 59.4
Sample D Male 51.2
Putamen
nTPM: 120.0
Samples: 4

Max nTPM: 214.4
Min nTPM: 57.7
Sample A Female 214.4
Sample B Female 57.7
Sample C Male 91.8
Sample D Male 116.2
Septum
nTPM: 95.3
Samples: 4

Max nTPM: 112.4
Min nTPM: 63.4
Sample A Female 112.4
Sample B Female 63.4
Sample C Male 98.6
Sample D Male 106.8
Ventral pallidum
nTPM: 112.4
Samples: 4

Max nTPM: 155.5
Min nTPM: 53.1
Sample A Female 53.1
Sample B Female 95.1
Sample C Male 145.9
Sample D Male 155.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 142.7
Samples: 4

Max nTPM: 147.6
Min nTPM: 136.4
Sample A Male 147.6
Sample B Male 136.4
Sample C Female 141.5
Sample D Female 145.4
Septum
nTPM: 166.9
Samples: 4

Max nTPM: 192.9
Min nTPM: 112.8
Sample A Male 112.8
Sample B Male 172.6
Sample C Female 192.9
Sample D Female 189.3
Ventral forebrain
nTPM: 102.9
Samples: 4

Max nTPM: 129.2
Min nTPM: 90.4
Sample A Male 95.1
Sample B Male 90.4
Sample C Female 129.2
Sample D Female 96.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.5
69540635 Antisense, RP_050426_02_B06, Mouse strain C57BL/6J (56 days, male) 3.7
73520971 Antisense, RP_051017_04_E11, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 2.1
69540635 Antisense, RP_050426_02_B06, Mouse strain C57BL/6J (56 days, male) 3.1
73520971 Antisense, RP_051017_04_E11, Mouse strain C57BL/6J (56 days, male) 1.1

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