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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:257.1 nTPM
HPA Brain:828.4 nTPM
GTEx:257.1 nTPM
FANTOM5:1065.1 Scaled Tags Per Million
Pig:138.4 nTPM
Mouse:268.5 nTPM
Allen mouse:8.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA078003
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

828.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 601.7
1857 Female, age 85, left hemisphere 687.9
2846 Female, age 79, unknown 672.5
2290 Female, age 72, unknown 671.4
1781 Male, age 74, unknown 647.4
1854 Male, age 80, left hemisphere 633.4
2288 Male, age 75, left hemisphere 536.8
2289 Male, age 61, right hemisphere 533.7
2481 Female, age 94, left hemisphere 430.2
Globus pallidus, externus
nTPM: 260.8
2646 Male, age 61, right hemisphere 302.6
2772 Female, age 79, unknown 282.1
2567 Female, age 72, unknown 258.7
2395 Male, age 75, both hemispheres 255.4
1996 Male, age 80, right hemisphere 205.3
Globus pallidus, internus
nTPM: 237.0
2483 Female, age 94, right hemisphere 403.9
1818 Male, age 74, unknown 265.2
2287 Male, age 75, right hemisphere 259.4
2566 Female, age 72, unknown 221.9
2037 Male, age 80, right hemisphere 192.8
2778 Female, age 91, both hemispheres 170.0
2111 Female, age 85, right hemisphere 146.0
Nucleus accumbens
nTPM: 582.8
1856 Female, age 91, right hemisphere 816.7
1783 Male, age 74, unknown 777.9
2824 Male, age 61, right hemisphere 705.4
1806 Female, age 85, left hemisphere 657.1
2698 Female, age 72, unknown 526.8
2286 Male, age 75, left hemisphere 514.9
2732 Male, age 80, right hemisphere 356.2
2391 Female, age 94, left hemisphere 307.5
Nucleus basalis of Meynert
nTPM: 481.4
2484 Female, age 94, left hemisphere 572.5
2393 Male, age 80, right hemisphere 518.1
2821 Male, age 75, both hemispheres 467.0
2569 Male, age 61, both hemispheres 367.8
Nucleus of the diagonal band
nTPM: 828.4
2195 Female, age 85, both hemispheres 1024.4
2775 Male, age 80, right hemisphere 959.1
1812 Female, age 91, both hemispheres 805.8
2029 Male, age 61, right hemisphere 786.9
1979 Male, age 74, unknown 565.8
Putamen
nTPM: 603.1
2647 Male, age 75, left hemisphere 720.8
1838 Male, age 80, right hemisphere 711.3
1937 Female, age 91, right hemisphere 643.4
2466 Female, age 79, unknown 612.8
2489 Female, age 72, unknown 564.9
1829 Male, age 74, unknown 510.2
2482 Female, age 94, left hemisphere 457.9
Septal nuclei
nTPM: 734.5
1960 Male, age 74, unknown 1143.9
2031 Female, age 72, unknown 824.6
2059 Female, age 85, both hemispheres 795.4
2629 Female, age 94, right hemisphere 777.1
2009 Female, age 91, both hemispheres 690.8
2394 Male, age 61, left hemisphere 485.6
2199 Male, age 80, right hemisphere 424.3
Stria terminalis, bed nucleus
nTPM: 709.9
2486 Female, age 94, both hemispheres 830.3
1974 Female, age 91, both hemispheres 829.6
2201 Male, age 74, unknown 470.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 171.6
Samples: 246

Max nTPM: 514.3
Min nTPM: 55.6
Std nTPM: 84.9
Median nTPM: 156.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 514.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 470.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 423.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 414.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 394.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 388.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 367.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 365.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 351.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 349.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 349.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 344.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 344.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 340.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 337.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 335.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 330.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 327.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 318.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 313.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 310.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 302.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 300.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 297.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 294.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 285.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 283.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 282.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 281.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 280.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 279.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 274.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 270.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 267.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 266.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 262.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 254.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 253.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 243.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 242.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 242.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 240.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 237.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 237.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 236.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 236.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 236.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 235.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 234.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 234.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 230.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 228.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 227.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 227.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 227.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 226.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 223.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 222.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 222.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 220.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 219.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 217.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 217.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 213.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 213.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 212.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 212.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 212.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 211.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 209.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 208.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 205.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 202.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 201.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 199.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 197.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 196.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 195.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 191.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 190.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 189.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 187.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 187.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 186.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 186.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 186.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 185.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 185.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 184.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 183.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 182.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 181.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 181.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 181.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 179.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 178.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 177.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 177.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 175.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 175.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 174.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 174.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 174.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 173.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 172.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 172.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 171.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 170.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 170.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 170.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 168.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 168.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 168.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 166.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 166.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 163.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 161.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 158.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 158.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 158.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 158.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 157.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 157.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 155.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 154.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 153.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 153.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 152.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 150.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 147.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 146.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 146.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 145.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 144.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 143.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 143.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 142.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 141.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 140.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 140.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 139.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 139.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 138.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 138.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 136.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 134.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 133.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 133.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 132.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 132.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 131.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 129.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 127.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 126.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 126.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 125.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 125.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 124.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 122.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 121.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 121.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 121.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 121.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 118.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 118.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 116.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 116.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 116.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 116.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 113.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 111.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 110.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 110.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 108.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 108.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 107.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 106.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 105.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 104.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 103.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 103.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 103.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 102.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 102.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 101.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 99.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 97.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 97.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 97.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 97.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 97.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 96.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 96.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 95.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 95.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 95.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 95.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 95.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 93.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 93.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 93.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 92.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 91.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 91.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 90.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 90.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 89.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 89.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 89.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 89.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 88.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 88.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 87.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 86.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 84.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 82.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 81.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 80.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 76.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 76.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 76.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 76.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 75.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 74.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 74.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 73.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 72.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 72.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 71.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 68.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 64.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 64.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 63.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 62.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 61.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 59.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 58.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 57.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 257.1
Samples: 246

Max nTPM: 577.6
Min nTPM: 34.1
Std nTPM: 118.7
Median nTPM: 248.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 577.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 540.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 537.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 536.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 521.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 520.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 516.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 500.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 497.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 491.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 484.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 470.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 456.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 455.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 444.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 444.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 441.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 440.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 437.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 435.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 434.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 433.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 425.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 424.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 421.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 413.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 406.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 405.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 405.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 399.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 397.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 396.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 395.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 395.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 395.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 392.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 390.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 389.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 388.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 382.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 382.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 382.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 379.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 376.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 374.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 372.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 371.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 369.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 368.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 367.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 364.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 361.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 360.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 359.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 356.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 356.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 355.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 354.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 353.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 351.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 348.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 347.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 345.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 342.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 338.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 337.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 333.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 331.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 330.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 330.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 327.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 326.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 324.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 323.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 322.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 321.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 319.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 319.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 318.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 318.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 314.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 312.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 309.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 307.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 305.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 305.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 304.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 303.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 303.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 302.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 301.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 298.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 297.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 296.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 295.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 294.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 293.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 291.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 287.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 286.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 282.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 280.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 280.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 277.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 272.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 268.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 268.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 268.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 266.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 265.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 264.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 264.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 262.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 259.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 259.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 258.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 258.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 253.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 252.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 251.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 249.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 249.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 248.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 248.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 246.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 244.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 243.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 242.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 239.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 238.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 237.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 236.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 235.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 233.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 232.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 229.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 228.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 227.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 227.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 220.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 219.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 219.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 218.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 218.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 215.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 214.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 210.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 209.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 208.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 208.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 206.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 206.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 205.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 204.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 203.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 201.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 200.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 199.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 198.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 195.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 194.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 194.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 190.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 190.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 189.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 189.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 188.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 182.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 181.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 179.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 176.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 174.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 173.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 173.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 169.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 164.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 164.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 163.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 163.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 163.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 162.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 161.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 157.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 157.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 156.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 154.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 153.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 152.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 151.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 149.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 147.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 144.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 143.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 142.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 140.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 140.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 136.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 135.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 134.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 134.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 132.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 132.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 130.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 129.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 125.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 124.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 124.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 123.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 123.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 121.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 121.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 120.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 119.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 119.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 116.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 113.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 113.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 112.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 111.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 108.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 104.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 102.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 101.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 99.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 98.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 98.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 98.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 97.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 97.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 97.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 96.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 96.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 92.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 92.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 88.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 87.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 85.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 82.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 80.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 78.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 78.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 75.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 75.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 75.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 70.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 34.1
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Brain - Putamen (basal ganglia)
Average nTPM: 154.3
Samples: 205

Max nTPM: 375.2
Min nTPM: 52.4
Std nTPM: 70.3
Median nTPM: 135.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 375.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 346.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 333.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 318.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 315.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 311.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 297.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 294.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 293.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 291.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 288.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 285.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 282.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 281.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 276.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 273.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 273.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 273.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 271.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 259.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 257.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 254.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 252.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 251.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 251.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 247.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 245.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 242.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 241.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 241.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 240.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 239.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 234.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 233.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 228.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 222.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 221.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 218.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 218.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 217.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 215.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 214.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 213.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 209.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 208.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 208.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 207.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 200.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 198.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 197.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 196.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 195.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 194.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 194.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 192.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 191.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 190.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 189.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 189.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 189.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 189.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 188.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 188.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 187.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 187.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 186.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 182.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 181.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 181.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 180.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 177.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 175.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 172.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 172.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 172.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 172.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 172.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 171.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 170.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 169.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 164.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 162.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 159.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 156.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 156.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 155.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 154.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 153.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 153.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 153.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 152.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 151.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 151.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 149.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 148.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 145.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 143.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 142.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 142.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 139.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 137.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 137.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 135.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 135.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 134.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 132.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 132.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 131.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 130.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 130.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 129.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 129.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 128.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 127.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 127.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 125.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 123.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 122.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 121.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 121.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 120.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 119.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 119.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 119.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 118.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 117.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 116.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 116.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 115.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 115.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 114.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 114.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 114.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 113.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 112.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 112.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 111.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 111.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 111.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 110.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 110.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 110.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 109.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 108.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 108.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 107.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 107.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 106.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 105.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 105.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 104.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 103.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 101.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 99.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 97.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 96.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 95.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 94.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 93.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 92.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 92.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 91.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 90.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 89.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 88.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 86.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 85.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 84.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 83.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 83.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 83.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 82.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 82.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 81.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 79.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 79.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 77.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 75.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 75.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 75.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 74.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 74.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 73.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 72.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 68.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 68.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 67.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 67.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 66.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 66.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 66.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 65.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 63.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 61.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 59.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 59.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 54.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 53.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 53.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 52.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1065.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 851.4
FF:10164-103B2 76 years, female 851.4
Nucleus accumbens
Scaled Tags Per Million: 1033.4
FF:10037-101F1 23-56 years, mixed 1033.4
Putamen
Scaled Tags Per Million: 1065.1
FF:10176-103C5 60 years, female 1065.1
Globus pallidus
Scaled Tags Per Million: 445.1
FF:10175-103C4 60 years, female 616.0
FF:10161-103A8 76 years, female 274.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.4
Pig sample Sample description nTPM
Caudate
nTPM: 138.4
Samples: 4

Max nTPM: 154.8
Min nTPM: 115.0
Sample A Female 115.0
Sample B Female 140.1
Sample C Male 154.8
Sample D Male 143.7
Putamen
nTPM: 129.8
Samples: 4

Max nTPM: 155.0
Min nTPM: 97.1
Sample A Female 97.1
Sample B Female 120.0
Sample C Male 147.0
Sample D Male 155.0
Septum
nTPM: 105.3
Samples: 4

Max nTPM: 110.4
Min nTPM: 96.2
Sample A Female 106.6
Sample B Female 108.0
Sample C Male 96.2
Sample D Male 110.4
Ventral pallidum
nTPM: 124.6
Samples: 4

Max nTPM: 138.0
Min nTPM: 109.5
Sample A Female 126.6
Sample B Female 109.5
Sample C Male 124.1
Sample D Male 138.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 263.7
Samples: 4

Max nTPM: 302.3
Min nTPM: 235.7
Sample A Male 241.2
Sample B Male 235.7
Sample C Female 275.6
Sample D Female 302.3
Septum
nTPM: 267.4
Samples: 4

Max nTPM: 280.1
Min nTPM: 254.1
Sample A Male 280.1
Sample B Male 271.9
Sample C Female 263.3
Sample D Female 254.1
Ventral forebrain
nTPM: 268.5
Samples: 4

Max nTPM: 284.8
Min nTPM: 253.8
Sample A Male 253.8
Sample B Male 261.3
Sample C Female 284.8
Sample D Female 274.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.1
73994671 Antisense, RP_051214_03_E06, Mouse strain C57BL/6J (56 days, male) 8.2
69735222 Antisense, RP_050503_02_C12, Mouse strain C57BL/6J (56 days, male) 8.0
Pallidum
Expression energy: 7.9
73994671 Antisense, RP_051214_03_E06, Mouse strain C57BL/6J (56 days, male) 8.0
69735222 Antisense, RP_050503_02_C12, Mouse strain C57BL/6J (56 days, male) 7.8

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