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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.5 nTPM
HPA Brain:105.1 nTPM
GTEx:54.5 nTPM
FANTOM5:58.5 Scaled Tags Per Million
Pig:53.6 nTPM
Mouse:31.1 nTPM
Allen mouse:0.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003315Antibody HPA064736Antibody CAB017118Antibody CAB068930
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detected








BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 76.6
2288 Male, age 75, left hemisphere 100.1
2846 Female, age 79, unknown 91.8
2481 Female, age 94, left hemisphere 87.0
2290 Female, age 72, unknown 80.2
1854 Male, age 80, left hemisphere 76.1
1857 Female, age 85, left hemisphere 63.7
2289 Male, age 61, right hemisphere 57.3
1781 Male, age 74, unknown 56.4
Globus pallidus, externus
nTPM: 67.2
1996 Male, age 80, right hemisphere 80.0
2772 Female, age 79, unknown 77.8
2395 Male, age 75, both hemispheres 72.5
2567 Female, age 72, unknown 55.7
2646 Male, age 61, right hemisphere 50.1
Globus pallidus, internus
nTPM: 66.4
2287 Male, age 75, right hemisphere 87.3
2483 Female, age 94, right hemisphere 80.0
2037 Male, age 80, right hemisphere 68.6
1818 Male, age 74, unknown 64.4
2778 Female, age 91, both hemispheres 58.0
2111 Female, age 85, right hemisphere 55.4
2566 Female, age 72, unknown 51.3
Nucleus accumbens
nTPM: 55.9
2286 Male, age 75, left hemisphere 77.1
2391 Female, age 94, left hemisphere 60.4
1783 Male, age 74, unknown 55.8
1856 Female, age 91, right hemisphere 55.8
1806 Female, age 85, left hemisphere 54.1
2698 Female, age 72, unknown 51.3
2732 Male, age 80, right hemisphere 48.9
2824 Male, age 61, right hemisphere 43.9
Nucleus basalis of Meynert
nTPM: 105.1
2821 Male, age 75, both hemispheres 167.9
2484 Female, age 94, left hemisphere 107.2
2393 Male, age 80, right hemisphere 91.9
2569 Male, age 61, both hemispheres 53.5
Nucleus of the diagonal band
nTPM: 57.8
1812 Female, age 91, both hemispheres 70.3
2195 Female, age 85, both hemispheres 59.9
2775 Male, age 80, right hemisphere 55.4
2029 Male, age 61, right hemisphere 54.2
1979 Male, age 74, unknown 49.3
Putamen
nTPM: 86.8
2489 Female, age 72, unknown 106.0
2647 Male, age 75, left hemisphere 102.2
2482 Female, age 94, left hemisphere 100.1
2466 Female, age 79, unknown 96.2
1838 Male, age 80, right hemisphere 72.6
1829 Male, age 74, unknown 70.7
1937 Female, age 91, right hemisphere 59.6
Septal nuclei
nTPM: 57.3
2031 Female, age 72, unknown 73.1
1960 Male, age 74, unknown 61.5
2199 Male, age 80, right hemisphere 60.1
2394 Male, age 61, left hemisphere 56.8
2059 Female, age 85, both hemispheres 51.1
2009 Female, age 91, both hemispheres 50.7
2629 Female, age 94, right hemisphere 47.6
Stria terminalis, bed nucleus
nTPM: 45.2
2201 Male, age 74, unknown 48.8
1974 Female, age 91, both hemispheres 43.7
2486 Female, age 94, both hemispheres 43.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 47.1
Samples: 246

Max nTPM: 128.1
Min nTPM: 3.5
Std nTPM: 22.8
Median nTPM: 43.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 128.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 120.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 117.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 100.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 99.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 97.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 94.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 94.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 94.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 92.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 92.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 90.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 86.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 86.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 85.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 85.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 85.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 84.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 83.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 83.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 82.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 81.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 81.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 80.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 78.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 77.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 77.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 76.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 76.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 75.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 74.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 74.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 74.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 73.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 72.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 71.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 70.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 68.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 68.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 68.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 66.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 65.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 65.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 65.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 65.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 65.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 64.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 64.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 64.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 61.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 60.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 59.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 59.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 59.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 59.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 59.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 58.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 58.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 57.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 57.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 56.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 55.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 55.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 54.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 54.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 54.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 54.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 53.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 53.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 52.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 52.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 52.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 51.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 51.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 51.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 51.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 51.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 50.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 49.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 49.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 49.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 48.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 47.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 47.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 47.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 47.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 46.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 46.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 46.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 46.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 45.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 45.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 45.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 45.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 45.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 44.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 44.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 44.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 44.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 43.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 43.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 43.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 43.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 43.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 42.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 42.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 42.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 42.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 41.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 41.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 41.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 41.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 40.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 40.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 40.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 40.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 39.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 38.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 38.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 38.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 38.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 38.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 37.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 37.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 37.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 37.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 37.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 36.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 36.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 36.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 36.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 35.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 35.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 35.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 35.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 35.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 34.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 34.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 34.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 34.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 34.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 34.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 33.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 33.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 33.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 33.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 32.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 32.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 32.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 32.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 32.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 31.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 30.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 29.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 29.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 29.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 29.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 29.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 28.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 28.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 28.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 28.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 27.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 27.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 26.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 26.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 26.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 26.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 25.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 23.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 23.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 23.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 22.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 22.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 22.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 21.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 21.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 21.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 20.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 20.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 19.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 18.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 18.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 17.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 17.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 16.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 16.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 16.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 15.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 14.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 14.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 13.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 13.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 12.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 11.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 11.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 10.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 10.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 8.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 7.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 5.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 4.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 23.3
Samples: 246

Max nTPM: 113.3
Min nTPM: 2.2
Std nTPM: 14.5
Median nTPM: 20.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 113.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 95.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 92.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 62.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 61.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 60.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 57.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 48.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 48.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 46.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 46.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 44.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 44.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 43.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 43.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 43.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 41.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 41.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 41.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 41.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 41.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 39.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 39.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 39.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 38.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 38.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 37.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 36.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 36.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 36.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 36.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 35.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 35.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 35.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 34.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 34.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 34.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 34.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 34.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 33.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 33.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 32.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 32.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 32.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 32.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 32.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 32.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 31.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 31.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 31.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 31.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 30.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 30.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 30.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 30.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 30.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 30.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 29.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 29.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 29.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 29.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 29.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 28.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 28.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 28.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 28.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 28.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 28.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 27.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 27.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 27.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 27.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 27.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 26.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 26.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 26.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 26.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 26.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 26.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 25.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 25.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 25.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 25.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 25.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 25.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 25.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 25.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 25.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 25.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 25.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 25.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 25.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 24.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 24.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 24.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 24.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 24.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 24.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 24.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 23.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 23.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 23.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 22.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 22.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 22.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 22.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 21.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 21.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 21.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 21.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 21.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 21.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 21.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 21.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 21.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 20.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 20.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 20.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 20.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 20.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 20.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 19.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 19.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 19.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 19.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 19.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 19.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 18.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 18.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 18.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 18.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 18.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 18.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 18.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 18.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 18.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 18.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 18.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 18.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 17.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 17.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 17.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 17.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 17.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 16.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 16.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 16.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 16.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 16.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 16.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 16.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 16.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 16.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 16.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 16.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 16.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 16.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 15.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 15.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 15.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 15.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 15.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 15.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 15.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 15.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 15.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 14.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 14.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 14.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 14.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 14.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 14.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 14.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 14.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 14.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 13.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 13.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 13.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 13.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 13.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 13.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 13.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 13.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 13.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 13.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 13.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 13.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 12.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 12.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 12.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 12.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 12.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 12.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 11.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 11.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 11.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 11.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 11.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 11.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 11.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 10.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 10.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 10.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 10.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 10.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 10.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 10.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 10.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 9.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 9.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 9.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 9.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 9.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 9.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 9.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 8.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 8.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 8.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 8.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 7.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 7.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 7.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 7.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 6.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 6.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 6.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 5.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 5.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 5.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 5.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 5.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 4.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 4.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 3.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2.2
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Brain - Putamen (basal ganglia)
Average nTPM: 54.5
Samples: 205

Max nTPM: 169.4
Min nTPM: 7.0
Std nTPM: 28.6
Median nTPM: 49.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 169.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 127.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 127.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 127.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 124.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 122.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 114.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 114.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 113.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 112.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 110.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 110.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 110.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 109.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 105.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 104.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 104.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 96.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 95.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 94.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 93.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 93.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 92.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 91.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 90.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 89.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 89.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 88.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 87.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 85.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 85.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 84.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 84.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 83.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 83.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 83.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 81.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 80.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 79.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 77.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 77.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 75.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 75.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 74.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 74.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 74.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 73.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 73.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 71.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 71.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 71.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 71.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 70.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 69.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 69.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 66.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 66.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 66.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 65.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 65.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 64.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 64.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 63.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 62.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 62.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 62.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 61.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 60.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 59.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 59.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 59.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 59.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 58.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 57.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 57.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 57.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 57.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 57.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 57.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 56.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 56.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 55.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 55.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 55.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 54.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 54.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 53.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 52.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 52.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 52.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 52.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 51.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 50.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 50.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 50.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 50.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 49.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 48.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 48.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 47.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 47.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 47.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 46.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 46.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 46.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 45.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 45.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 45.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 45.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 45.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 45.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 44.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 44.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 44.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 44.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 44.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 44.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 43.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 43.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 43.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 42.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 42.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 42.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 41.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 40.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 40.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 40.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 39.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 39.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 39.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 39.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 39.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 38.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 38.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 37.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 36.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 36.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 35.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 35.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 35.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 35.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 34.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 34.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 34.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 33.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 33.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 33.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 32.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 32.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 31.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 31.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 31.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 31.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 31.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 31.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 31.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 29.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 28.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 28.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 27.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 27.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 27.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 26.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 26.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 26.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 26.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 26.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 25.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 25.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 24.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 24.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 23.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 23.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 22.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 21.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 20.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 19.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 19.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 19.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 18.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 17.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 16.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 16.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 16.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 14.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 11.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 11.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 11.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 10.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 7.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

58.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 40.6
FF:10164-103B2 76 years, female 40.6
Nucleus accumbens
Scaled Tags Per Million: 44.3
FF:10037-101F1 23-56 years, mixed 44.3
Putamen
Scaled Tags Per Million: 24.5
FF:10176-103C5 60 years, female 24.5
Globus pallidus
Scaled Tags Per Million: 58.5
FF:10161-103A8 76 years, female 83.2
FF:10175-103C4 60 years, female 33.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.6
Pig sample Sample description nTPM
Caudate
nTPM: 28.5
Samples: 4

Max nTPM: 42.4
Min nTPM: 13.0
Sample A Female 42.4
Sample B Female 30.5
Sample C Male 28.2
Sample D Male 13.0
Putamen
nTPM: 53.6
Samples: 4

Max nTPM: 91.7
Min nTPM: 19.3
Sample A Female 19.3
Sample B Female 61.7
Sample C Male 91.7
Sample D Male 41.8
Septum
nTPM: 22.7
Samples: 4

Max nTPM: 33.5
Min nTPM: 9.2
Sample A Female 33.5
Sample B Female 17.3
Sample C Male 30.6
Sample D Male 9.2
Ventral pallidum
nTPM: 17.3
Samples: 4

Max nTPM: 32.8
Min nTPM: 10.0
Sample A Female 10.9
Sample B Female 32.8
Sample C Male 10.0
Sample D Male 15.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.4
Sample A Male 9.5
Sample B Male 11.4
Sample C Female 8.4
Sample D Female 9.5
Septum
nTPM: 22.4
Samples: 4

Max nTPM: 33.2
Min nTPM: 14.3
Sample A Male 33.2
Sample B Male 16.6
Sample C Female 25.6
Sample D Female 14.3
Ventral forebrain
nTPM: 31.1
Samples: 4

Max nTPM: 43.8
Min nTPM: 19.4
Sample A Male 19.4
Sample B Male 39.3
Sample C Female 43.8
Sample D Female 21.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
330 Antisense, RP_Baylor_102722, Mouse strain C57BL/6J (56 days, male) 0.9
329 Antisense, RP_Baylor_102722, Mouse strain C57BL/6J (56 days, male) 0.8
79761045 Antisense, RP_071204_04_A02, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.6
329 Antisense, RP_Baylor_102722, Mouse strain C57BL/6J (56 days, male) 0.9
330 Antisense, RP_Baylor_102722, Mouse strain C57BL/6J (56 days, male) 0.6
79761045 Antisense, RP_071204_04_A02, Mouse strain C57BL/6J (56 days, male) 0.3

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