HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.9 nTPM
HPA Brain:76.2 nTPM
GTEx:28.9 nTPM
FANTOM5:44.5 Scaled Tags Per Million
Pig:70.2 nTPM
Mouse:92.8 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003315Antibody HPA064736Antibody CAB017118Antibody CAB068930
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedLow









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 76.2
Sample id Sample description nTPM
Hippocampus
nTPM: 62.3
2529 Female, age 94, left hemisphere 74.3
1898 Male, age 80, left hemisphere 65.3
2621 Female, age 67, right hemisphere 63.8
1855 Male, age 76, left hemisphere 61.3
1911 Female, age 85, right hemisphere 60.1
2148 Female, age 91, left hemisphere 48.8
Dentate gyrus
nTPM: 56.6
2531 Female, age 67, both hemispheres 59.9
2528 Male, age 74, both hemispheres 59.3
2530 Female, age 94, left hemisphere 58.2
2010 Male, age 76, both hemispheres 56.9
2246 Female, age 85, both hemispheres 53.0
1927 Female, age 91, both hemispheres 52.3
Entorhinal gyrus
nTPM: 60.2
1787 Male, age 76, left hemisphere 72.9
1938 Female, age 85, left hemisphere 65.2
2764 Male, age 80, right hemisphere 59.9
2117 Female, age 91, right hemisphere 59.4
2686 Male, age 75, right hemisphere 59.0
2613 Female, age 94, left hemisphere 45.0
Hippocampus, CA1
nTPM: 50.0
2045 Male, age 76, both hemispheres 58.7
1873 Female, age 85, both hemispheres 56.0
2527 Male, age 74, both hemispheres 50.5
2082 Female, age 91, right hemisphere 44.2
2749 Male, age 80, left hemisphere 40.6
Hippocampus, CA2
nTPM: 54.6
2437 Female, age 94, left hemisphere 68.2
1892 Male, age 76, both hemispheres 56.9
1963 Male, age 80, left hemisphere 52.6
1940 Female, age 85, left hemisphere 52.3
2113 Female, age 91, right hemisphere 48.8
2249 Male, age 74, both hemispheres 48.7
Hippocampus, CA3
nTPM: 57.1
1867 Male, age 76, both hemispheres 72.2
2436 Male, age 74, both hemispheres 64.0
1891 Female, age 85, both hemispheres 62.6
2137 Male, age 80, left hemisphere 52.8
2861 Female, age 67, both hemispheres 47.8
2620 Female, age 94, left hemisphere 43.4
Parahippocampal cortex
nTPM: 70.5
1933 Female, age 85, both hemispheres 109.5
2018 Male, age 76, both hemispheres 104.3
2245 Female, age 91, both hemispheres 76.2
1990 Female, age 91, right hemisphere 75.2
2250 Female, age 67, right hemisphere 68.7
1850 Male, age 80, both hemispheres 64.3
2693 Female, age 94, both hemispheres 56.9
2532 Female, age 72, left hemisphere 52.4
2622 Female, age 67, right hemisphere 51.3
2692 Male, age 74, both hemispheres 46.0
Perirhinal gyrus
nTPM: 76.2
2521 Female, age 94, right hemisphere 98.0
2848 Male, age 76, right hemisphere 81.7
1847 Female, age 91, left hemisphere 78.1
1841 Female, age 85, right hemisphere 67.0
1794 Male, age 80, right hemisphere 56.3
Subiculum
nTPM: 61.2
1977 Female, age 85, both hemispheres 103.0
2042 Male, age 76, both hemispheres 60.6
2729 Female, age 91, right hemisphere 60.1
2619 Male, age 74, both hemispheres 54.4
1901 Male, age 80, both hemispheres 49.6
2438 Female, age 94, left hemisphere 39.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 28.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.9
Samples: 197

Max nTPM: 82.5
Min nTPM: 4.3
Std nTPM: 15.5
Median nTPM: 26.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 82.5
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 82.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 68.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 67.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 64.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 62.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 61.0
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 60.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 57.0
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 55.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 54.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 44.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.5
FF:10153-102I9 76 years, female 50.7
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 70.2
Pig sample Sample description nTPM
Subiculum
nTPM: 70.2
Samples: 4

Max nTPM: 94.7
Min nTPM: 53.4
Sample A Female 94.7
Sample B Female 53.4
Sample C Male 75.8
Sample D Male 56.8
Dorsal hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 36.7
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 20.8
Sample C Male 36.7
Sample D Male 17.7
Entorhinal cortex
nTPM: 68.9
Samples: 4

Max nTPM: 87.2
Min nTPM: 52.9
Sample A Female 57.1
Sample B Female 52.9
Sample C Male 87.2
Sample D Male 78.4
Ventral hippocampus
nTPM: 39.6
Samples: 4

Max nTPM: 49.1
Min nTPM: 22.9
Sample A Female 22.9
Sample B Female 37.6
Sample C Male 48.9
Sample D Male 49.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 92.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.8
Samples: 4

Max nTPM: 141.0
Min nTPM: 34.4
Sample A Male 34.4
Sample B Male 58.8
Sample C Female 141.0
Sample D Female 136.8
Hippocampal formation
nTPM: 77.3
Samples: 4

Max nTPM: 105.1
Min nTPM: 47.6
Sample A Male 105.1
Sample B Male 77.1
Sample C Female 47.6
Sample D Female 79.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
329 Antisense, RP_Baylor_102722, Mouse strain C57BL/6J (56 days, male) 3.6
330 Antisense, RP_Baylor_102722, Mouse strain C57BL/6J (56 days, male) 2.6
79761045 Antisense, RP_071204_04_A02, Mouse strain C57BL/6J (56 days, male) 2.0

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