HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:44.9 nTPM
HPA Brain:65.9 nTPM
GTEx:44.9 nTPM
FANTOM5:119.5 Scaled Tags Per Million
Pig:46.3 nTPM
Mouse:56.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047752Antibody CAB017042
Glial cells MediumNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 65.9
Sample id Sample description nTPM
Hippocampus
nTPM: 61.9
1855 Male, age 76, left hemisphere 70.5
1911 Female, age 85, right hemisphere 70.2
2529 Female, age 94, left hemisphere 67.5
2621 Female, age 67, right hemisphere 56.1
1898 Male, age 80, left hemisphere 55.0
2148 Female, age 91, left hemisphere 52.0
Dentate gyrus
nTPM: 54.6
2010 Male, age 76, both hemispheres 74.4
2528 Male, age 74, both hemispheres 60.3
2530 Female, age 94, left hemisphere 56.6
2246 Female, age 85, both hemispheres 52.5
1927 Female, age 91, both hemispheres 46.9
2531 Female, age 67, both hemispheres 37.1
Entorhinal gyrus
nTPM: 55.8
2117 Female, age 91, right hemisphere 77.8
1787 Male, age 76, left hemisphere 63.0
1938 Female, age 85, left hemisphere 61.4
2686 Male, age 75, right hemisphere 46.5
2613 Female, age 94, left hemisphere 43.5
2764 Male, age 80, right hemisphere 42.5
Hippocampus, CA1
nTPM: 59.7
2045 Male, age 76, both hemispheres 79.1
2527 Male, age 74, both hemispheres 61.8
2749 Male, age 80, left hemisphere 57.4
1873 Female, age 85, both hemispheres 53.5
2082 Female, age 91, right hemisphere 46.7
Hippocampus, CA2
nTPM: 60.2
1892 Male, age 76, both hemispheres 71.7
2249 Male, age 74, both hemispheres 70.9
1940 Female, age 85, left hemisphere 57.3
2113 Female, age 91, right hemisphere 55.2
1963 Male, age 80, left hemisphere 54.1
2437 Female, age 94, left hemisphere 52.3
Hippocampus, CA3
nTPM: 59.1
1867 Male, age 76, both hemispheres 79.8
1891 Female, age 85, both hemispheres 69.0
2436 Male, age 74, both hemispheres 64.3
2620 Female, age 94, left hemisphere 57.4
2137 Male, age 80, left hemisphere 50.1
2861 Female, age 67, both hemispheres 34.3
Parahippocampal cortex
nTPM: 52.3
2692 Male, age 74, both hemispheres 61.7
2250 Female, age 67, right hemisphere 56.2
1933 Female, age 85, both hemispheres 55.6
2693 Female, age 94, both hemispheres 54.3
2532 Female, age 72, left hemisphere 52.9
1990 Female, age 91, right hemisphere 52.8
1850 Male, age 80, both hemispheres 51.1
2245 Female, age 91, both hemispheres 47.9
2018 Male, age 76, both hemispheres 45.7
2622 Female, age 67, right hemisphere 44.5
Perirhinal gyrus
nTPM: 52.7
2848 Male, age 76, right hemisphere 76.9
2521 Female, age 94, right hemisphere 51.3
1841 Female, age 85, right hemisphere 48.6
1847 Female, age 91, left hemisphere 43.8
1794 Male, age 80, right hemisphere 42.8
Subiculum
nTPM: 65.9
2042 Male, age 76, both hemispheres 93.4
2729 Female, age 91, right hemisphere 63.7
1901 Male, age 80, both hemispheres 61.8
1977 Female, age 85, both hemispheres 59.8
2438 Female, age 94, left hemisphere 58.7
2619 Male, age 74, both hemispheres 58.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 44.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.9
Samples: 197

Max nTPM: 135.6
Min nTPM: 18.0
Std nTPM: 18.6
Median nTPM: 41.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 135.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 120.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 106.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 98.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 88.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 87.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 85.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 85.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 82.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 82.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 81.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 119.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.5
FF:10153-102I9 76 years, female 144.6
FF:10169-103B7 60 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.3
Pig sample Sample description nTPM
Subiculum
nTPM: 34.8
Samples: 4

Max nTPM: 35.8
Min nTPM: 33.2
Sample A Female 35.7
Sample B Female 33.2
Sample C Male 34.4
Sample D Male 35.8
Dorsal hippocampus
nTPM: 46.3
Samples: 4

Max nTPM: 52.8
Min nTPM: 40.8
Sample A Female 48.4
Sample B Female 40.8
Sample C Male 52.8
Sample D Male 43.1
Entorhinal cortex
nTPM: 35.8
Samples: 4

Max nTPM: 44.1
Min nTPM: 29.7
Sample A Female 31.5
Sample B Female 44.1
Sample C Male 37.9
Sample D Male 29.7
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 42.6
Min nTPM: 29.8
Sample A Female 30.9
Sample B Female 29.8
Sample C Male 42.6
Sample D Male 39.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 56.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 60.7
Min nTPM: 47.0
Sample A Male 60.7
Sample B Male 54.9
Sample C Female 53.7
Sample D Female 47.0
Hippocampal formation
nTPM: 56.2
Samples: 4

Max nTPM: 59.7
Min nTPM: 52.4
Sample A Male 59.7
Sample B Male 56.4
Sample C Female 56.1
Sample D Female 52.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
71610865 Antisense, RP_050927_02_A05, Mouse strain C57BL/6J (56 days, male) 0.7
74273118 Antisense, RP_050927_02_A05, Mouse strain C57BL/6J (56 days, male) 0.4

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