PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		68.811
Mouse brain, Intensity
Ponsi 		56.178
RNA expressioni
HPA Brain:234.9 nTPM
FANTOM5:231.8 Scaled Tags Per Million
Pig:410.5 nTPM
Mouse:140.3 nTPM
Allen mouse:1.5 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA070467
Medulla oblongata mean intensity 68.811
intensityi
FRONT BACK
Nucleus of the solitary tract 5.651
Raphe magnus nucleus 12.399
Cochlear nucleus 11.203
Lateral paragigantocellular nucleus 14.631
Raphe pallidus nucleus 15.607
Facial nucleus 15.843
Hypoglossal nucleus 13.269
Ambiguus nucleus 15.314
External cuneate nucleus 35.439
Inferior olivary nucleus 3.024
Raphe obscures nucleus 4.285
Dorsal motor nucleus of vagus 68.811
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 11.744
Parabrachial nucleus 33.130
Principle sensory trigeminal nucleus 16.740
Locus coeruleus 33.145
Pontine nucleus 23.801
Vestibular nucleus 8.333
Pontine reticular nucleus, oral 6.882
Lateral lemniscus 56.178
Superior paraolivary nucleus 4.515

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 234.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 142.3
1984 Male, age 76, both hemispheres 199.8
2301 Female, age 85, both hemispheres 133.9
2188 Female, age 91, both hemispheres 118.1
2090 Male, age 80, both hemispheres 117.3
Area postrema
nTPM: 178.0
2306 Male, age 80, both hemispheres 224.7
2799 Male, age 61, both hemispheres 156.6
2054 Male, age 76, both hemispheres 152.7
Dorsal cochlear nucleus
nTPM: 134.4
2802 Male, age 74, right hemisphere 168.2
2187 Female, age 91, both hemispheres 130.9
2370 Male, age 61, both hemispheres 129.7
2378 Male, age 80, both hemispheres 125.8
2058 Male, age 76, both hemispheres 117.5
Dorsal medullary reticular nucleus
nTPM: 160.3
2040 Female, age 85, both hemispheres 206.4
2373 Male, age 61, both hemispheres 163.1
2088 Male, age 76, both hemispheres 111.3
Dorsal motor vagal complex
nTPM: 181.7
2813 Female, age 72, unknown 227.4
2797 Male, age 61, both hemispheres 224.9
2000 Male, age 74, unknown 208.7
2643 Male, age 74, both hemispheres 196.8
2844 Male, age 55, unknown 193.4
2133 Female, age 91, both hemispheres 164.5
2185 Male, age 76, both hemispheres 125.9
2807 Female, age 85, both hemispheres 111.8
Dorsal tegmental nucleus
nTPM: 124.6
2083 Male, age 80, both hemispheres 156.2
2326 Male, age 74, both hemispheres 134.9
1936 Male, age 76, left hemisphere 123.2
2358 Male, age 61, both hemispheres 84.3
Dorsolateral tegmental area
nTPM: 146.3
2751 Female, age 85, both hemispheres 175.2
2141 Male, age 76, both hemispheres 164.4
2360 Male, age 74, both hemispheres 160.7
2654 Male, age 80, both hemispheres 154.8
2337 Male, age 61, both hemispheres 76.3
Gigantocellular reticular nuclei, medullary
nTPM: 156.4
2314 Male, age 61, both hemispheres 205.1
1876 Female, age 85, both hemispheres 184.6
2462 Male, age 74, both hemispheres 182.2
2387 Female, age 91, both hemispheres 139.2
2022 Male, age 76, right hemisphere 130.3
2310 Male, age 80, both hemispheres 97.3
Gigantocellular reticular nuclei, pars
nTPM: 149.5
2168 Male, age 76, both hemispheres 197.6
2084 Female, age 85, both hemispheres 196.1
2336 Male, age 61, both hemispheres 148.8
2330 Male, age 80, both hemispheres 103.5
2706 Male, age 80, both hemispheres 101.3
Inferior olive
nTPM: 226.1
2563 Male, age 74, both hemispheres 299.8
2085 Female, age 85, both hemispheres 266.8
2178 Male, age 61, both hemispheres 192.5
2628 Female, age 91, both hemispheres 186.9
2379 Male, age 80, both hemispheres 184.4
Kolliker-Fuse nucleus
nTPM: 134.1
2315 Male, age 76, right hemisphere 177.5
2163 Male, age 80, both hemispheres 140.0
2793 Female, age 91, left hemisphere 84.7
Lateral lemniscal nuclei
nTPM: 128.6
2169 Male, age 76, both hemispheres 201.6
2746 Female, age 85, left hemisphere 134.1
2036 Male, age 80, both hemispheres 129.9
2453 Male, age 74, right hemisphere 99.8
2320 Female, age 91, left hemisphere 77.8
Lateral medullary reticular nucleus
nTPM: 216.0
2804 Female, age 91, both hemispheres 271.5
2305 Male, age 74, both hemispheres 233.7
2190 Female, age 85, both hemispheres 225.3
2374 Male, age 61, both hemispheres 223.2
2852 Male, age 80, both hemispheres 178.4
2044 Male, age 76, both hemispheres 164.1
Lateral parabrachial nucleus
nTPM: 144.1
2139 Female, age 85, right hemisphere 229.8
2013 Male, age 80, both hemispheres 150.1
2792 Male, age 76, both hemispheres 108.4
2790 Male, age 61, both hemispheres 87.8
Lateral vestibular nucleus
nTPM: 131.3
2311 Male, age 80, both hemispheres 134.5
2184 Male, age 76, both hemispheres 128.1
Locus coeruleus
nTPM: 181.6
2014 Male, age 55, unknown 233.6
2788 Male, age 74, unknown 222.3
2123 Female, age 91, both hemispheres 206.5
2317 Female, age 72, unknown 176.3
1980 Male, age 76, both hemispheres 172.5
2162 Male, age 80, both hemispheres 137.4
2720 Male, age 74, both hemispheres 122.8
Medial olivary nucleus
nTPM: 218.4
2138 Female, age 91, both hemispheres 363.4
1943 Male, age 61, both hemispheres 237.5
2851 Male, age 80, both hemispheres 162.9
1962 Male, age 76, both hemispheres 109.9
Medial parabrachial nucleus
nTPM: 135.9
2463 Female, age 85, right hemisphere 166.5
2170 Female, age 91, both hemispheres 138.1
2854 Male, age 80, both hemispheres 137.2
2786 Male, age 76, both hemispheres 128.9
2156 Male, age 61, both hemispheres 108.5
Medial periolivary nuclei
nTPM: 152.4
2791 Male, age 74, right hemisphere 212.4
2063 Male, age 76, both hemispheres 212.1
2171 Female, age 85, both hemispheres 160.4
2081 Male, age 80, both hemispheres 89.6
2458 Female, age 91, both hemispheres 87.3
Medial vestibular nucleus
nTPM: 153.7
2743 Female, age 85, both hemispheres 176.2
2093 Male, age 80, both hemispheres 162.3
2803 Female, age 91, both hemispheres 155.3
2134 Male, age 76, both hemispheres 153.1
2801 Male, age 74, both hemispheres 144.2
2624 Male, age 61, both hemispheres 131.3
Motor facial nucleus
nTPM: 149.6
2062 Male, age 76, both hemispheres 204.7
2795 Female, age 91, both hemispheres 176.8
2365 Male, age 74, right hemisphere 159.6
2126 Male, age 61, both hemispheres 129.9
2697 Female, age 85, both hemispheres 114.8
2327 Male, age 80, both hemispheres 111.6
Motor hypoglossal nucleus
nTPM: 147.7
2461 Male, age 61, both hemispheres 181.8
2125 Female, age 91, both hemispheres 173.7
2277 Male, age 76, both hemispheres 159.1
2132 Female, age 85, both hemispheres 122.7
2182 Male, age 80, both hemispheres 101.0
Motor trigeminal nucleus
nTPM: 106.7
2309 Male, age 76, both hemispheres 133.1
2335 Male, age 61, both hemispheres 121.1
2079 Male, age 80, both hemispheres 119.7
2560 Male, age 74, both hemispheres 83.6
2321 Female, age 91, both hemispheres 76.1
Nuclei of the trapezoid body
nTPM: 159.5
2159 Male, age 61, both hemispheres 202.3
1983 Male, age 76, both hemispheres 179.5
2735 Female, age 85, both hemispheres 167.0
2368 Female, age 91, both hemispheres 128.9
2166 Male, age 80, both hemispheres 119.6
Nucleus ambiguus
nTPM: 128.0
2071 Male, age 76, both hemispheres 147.6
2096 Female, age 85, both hemispheres 108.5
Nucleus cuneatus
nTPM: 143.6
2564 Male, age 74, both hemispheres 228.4
2380 Male, age 80, both hemispheres 202.3
2808 Female, age 85, both hemispheres 146.7
2562 Male, age 61, both hemispheres 146.2
2131 Male, age 76, both hemispheres 130.9
2376 Male, age 61, both hemispheres 121.4
2805 Female, age 91, both hemispheres 114.9
2100 Male, age 76, both hemispheres 104.2
2381 Male, age 80, both hemispheres 97.4
Nucleus gracilis
nTPM: 188.0
2627 Male, age 74, both hemispheres 350.3
2299 Female, age 85, both hemispheres 123.2
2382 Male, age 80, both hemispheres 90.4
Nucleus raphe magnus
nTPM: 147.9
2160 Male, age 61, both hemispheres 201.9
2455 Male, age 74, both hemispheres 191.8
2051 Male, age 76, both hemispheres 141.6
2172 Female, age 85, both hemispheres 139.6
2328 Male, age 80, both hemispheres 122.5
2459 Female, age 91, both hemispheres 90.2
Nucleus raphe obscurus
nTPM: 163.4
2800 Male, age 61, midline 179.4
2845 Female, age 85, midline 171.5
2142 Male, age 76, midline 139.4
Nucleus raphe pallidus
nTPM: 150.1
1924 Male, age 61, midline 180.8
2183 Male, age 80, midline 160.2
2145 Male, age 76, midline 109.3
Nucleus tractus solitarii
nTPM: 234.9
2144 Female, age 91, right hemisphere 494.7
2191 Female, age 85, both hemispheres 175.7
2656 Male, age 76, both hemispheres 165.2
2307 Male, age 80, both hemispheres 104.2
Paramedian reticular nucleus
nTPM: 168.2
2050 Female, age 85, both hemispheres 178.0
2057 Male, age 80, both hemispheres 177.3
2313 Male, age 61, both hemispheres 175.3
2052 Male, age 76, both hemispheres 142.3
Parvicellular reticular nuclei
nTPM: 133.7
2119 Male, age 80, both hemispheres 180.9
2095 Male, age 76, both hemispheres 133.0
2558 Male, age 74, both hemispheres 87.2
Parvicellular reticular nuclei, medullary
nTPM: 146.6
2189 Female, age 91, both hemispheres 153.5
2091 Female, age 85, both hemispheres 143.5
2181 Male, age 80, left hemisphere 142.7
Pedunculopontine tegmental nucleus
nTPM: 157.5
1921 Female, age 85, both hemispheres 196.3
2334 Male, age 80, both hemispheres 161.6
2338 Male, age 61, both hemispheres 114.6
Peritrigeminal nucleus
nTPM: 194.7
2067 Female, age 85, both hemispheres 249.4
2179 Male, age 61, both hemispheres 181.2
2136 Male, age 76, both hemispheres 153.6
Pontine nuclei
nTPM: 135.1
1863 Male, age 55, unknown 197.0
2727 Male, age 61, right hemisphere 163.2
1968 Male, age 76, left hemisphere 158.7
2109 Female, age 72, unknown 148.5
2787 Female, age 85, both hemispheres 146.7
2319 Female, age 91, both hemispheres 94.4
2115 Male, age 80, left hemisphere 93.3
2454 Male, age 74, left hemisphere 79.1
Pontine raphe nucleus
nTPM: 201.6
2853 Male, age 76, midline 221.1
2122 Female, age 85, midline 182.2
Posteroventral cochlear nucleus
nTPM: 127.4
2752 Female, age 85, both hemispheres 170.4
2070 Male, age 76, both hemispheres 137.7
2371 Male, age 61, both hemispheres 116.3
2341 Male, age 80, both hemispheres 113.1
2135 Female, age 91, both hemispheres 99.8
Prepositus hypoglossal nucleus
nTPM: 169.7
2086 Male, age 80, both hemispheres 180.4
2855 Female, age 85, right hemisphere 158.9
Principal sensory trigeminal nucleus
nTPM: 129.2
2158 Male, age 61, both hemispheres 182.4
2008 Male, age 80, left hemisphere 135.5
2324 Male, age 76, both hemispheres 123.0
2367 Female, age 91, left hemisphere 75.7
Reticular pontine nucleus, caudal
nTPM: 112.1
2092 Male, age 76, both hemispheres 172.2
2332 Male, age 80, right hemisphere 110.1
2457 Female, age 91, both hemispheres 83.5
2559 Male, age 74, both hemispheres 82.4
Reticular pontine nucleus, oral
nTPM: 132.0
2012 Female, age 85, both hemispheres 171.6
1939 Male, age 80, both hemispheres 165.5
2167 Male, age 76, both hemispheres 150.3
2366 Female, age 91, both hemispheres 92.0
2361 Male, age 74, both hemispheres 80.6
Reticulotegmental nucleus
nTPM: 135.9
2325 Male, age 76, both hemispheres 172.9
2333 Male, age 80, both hemispheres 134.6
2322 Female, age 91, both hemispheres 128.1
2452 Male, age 74, both hemispheres 108.1
Spinal trigeminal nucleus, caudal
nTPM: 141.1
2390 Female, age 91, both hemispheres 150.4
2308 Male, age 80, both hemispheres 149.7
2642 Male, age 74, both hemispheres 148.7
2312 Male, age 61, both hemispheres 129.9
2447 Male, age 76, both hemispheres 126.6
Spinal trigeminal nucleus, interpolar
nTPM: 159.3
2066 Male, age 76, right hemisphere 203.0
2625 Male, age 61, both hemispheres 189.1
2386 Female, age 85, both hemispheres 141.8
2033 Male, age 80, both hemispheres 139.9
2389 Female, age 91, both hemispheres 122.6
Spinal trigeminal nucleus, oral
nTPM: 142.6
2737 Female, age 85, both hemispheres 166.4
1978 Male, age 76, both hemispheres 150.6
2164 Male, age 80, both hemispheres 110.7
Spinal vestibular nucleus
nTPM: 137.3
2806 Female, age 85, both hemispheres 169.6
2186 Female, age 91, both hemispheres 155.3
2780 Male, age 80, both hemispheres 137.5
2796 Male, age 61, both hemispheres 125.7
2384 Male, age 74, both hemispheres 121.3
2748 Male, age 76, both hemispheres 114.4
Subcoeruleus area
nTPM: 144.4
1958 Male, age 80, both hemispheres 163.4
2369 Female, age 85, left hemisphere 154.6
2323 Female, age 91, left hemisphere 148.2
2089 Male, age 76, left hemisphere 141.5
2451 Male, age 74, both hemispheres 114.3
Superior olive
nTPM: 146.1
2364 Male, age 74, right hemisphere 207.2
2020 Male, age 76, both hemispheres 162.3
1875 Female, age 85, both hemispheres 161.0
2329 Male, age 80, right hemisphere 111.0
2561 Female, age 91, both hemispheres 89.2
Superior vestibular nucleus
nTPM: 204.6
2383 Male, age 74, both hemispheres 309.0
2015 Male, age 80, both hemispheres 169.8
2061 Male, age 76, both hemispheres 135.1
Ventral medullary reticular nucleus
nTPM: 171.1
2372 Male, age 61, both hemispheres 209.4
2060 Male, age 76, both hemispheres 132.7
Ventral periolivary nuclei
nTPM: 152.7
2130 Female, age 85, both hemispheres 198.5
2023 Male, age 76, both hemispheres 166.9
2165 Male, age 80, both hemispheres 159.0
2794 Female, age 91, left hemisphere 86.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 172.1
2302 Female, age 91, both hemispheres 201.5
2180 Male, age 61, both hemispheres 187.3
2741 Female, age 85, both hemispheres 182.2
1986 Male, age 76, both hemispheres 164.9
2118 Male, age 80, both hemispheres 124.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 127.9
1959 Male, age 76, both hemispheres 158.7
2840 Female, age 85, both hemispheres 145.0
2449 Male, age 74, both hemispheres 132.1
2161 Male, age 80, both hemispheres 119.3
2359 Male, age 61, both hemispheres 117.7
2456 Female, age 91, both hemispheres 94.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 231.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 189.1
FF:10182-103D2 60 years, female 204.5
FF:10165-103B3 76 years, female 173.7
Medulla oblongata
Scaled Tags Per Million: 209.8
FF:10155-103A2 76 years, female 221.9
FF:10038-101F2 18-64 years, mixed 220.8
FF:10174-103C3 60 years, female 186.7
Pons
Scaled Tags Per Million: 231.8
FF:10033-101E6 18-54 years, mixed 231.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 410.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 410.5
Samples: 4

Max nTPM: 457.0
Min nTPM: 379.4
Sample A Female 457.0
Sample B Female 388.2
Sample C Male 379.4
Sample D Male 417.3
Pons
nTPM: 373.5
Samples: 4

Max nTPM: 404.3
Min nTPM: 355.0
Sample A Female 375.7
Sample B Female 355.0
Sample C Male 358.8
Sample D Male 404.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 140.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 140.4
Samples: 4

Max nTPM: 143.7
Min nTPM: 136.4
Sample A Male 138.1
Sample B Male 143.2
Sample C Female 136.4
Sample D Female 143.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.5
416 Antisense, RP_Baylor_102695, Mouse strain C57BL/6J (56 days, male) 2.7
414 Antisense, RP_Baylor_102695, Mouse strain C57BL/6J (56 days, male) 1.7
74300879 Antisense, RP_051219_03_H12, Mouse strain C57BL/6J (56 days, male) 0.3
Pons
Expression energy: 1.4
416 Antisense, RP_Baylor_102695, Mouse strain C57BL/6J (56 days, male) 2.4
414 Antisense, RP_Baylor_102695, Mouse strain C57BL/6J (56 days, male) 2.2
74300879 Antisense, RP_051219_03_H12, Mouse strain C57BL/6J (56 days, male) 0.4

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