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ATP1A2
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  • ATP1A2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:590.4 nTPM
FANTOM5:741.8 Scaled Tags Per Million
Pig:310.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB022230
Glial cells Medium
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

590.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 590.4
Samples: 246

Max nTPM: 1475.9
Min nTPM: 95.7
Std nTPM: 233.2
Median nTPM: 549.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1475.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1318.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1304.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1243.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1202.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1151.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1104.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1096.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1076.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1049.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1040.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1034.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1017.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 986.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 975.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 972.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 963.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 956.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 952.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 946.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 938.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 930.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 929.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 923.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 923.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 922.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 912.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 903.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 900.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 894.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 880.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 872.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 866.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 849.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 842.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 835.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 821.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 821.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 818.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 818.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 813.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 804.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 803.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 802.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 796.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 788.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 778.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 774.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 768.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 768.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 763.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 761.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 761.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 754.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 752.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 750.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 749.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 747.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 736.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 734.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 731.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 728.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 723.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 716.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 716.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 703.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 694.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 694.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 687.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 682.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 676.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 675.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 668.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 667.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 665.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 664.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 664.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 662.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 662.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 656.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 655.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 651.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 650.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 650.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 649.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 645.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 642.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 640.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 639.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 635.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 632.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 629.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 626.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 624.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 624.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 622.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 620.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 618.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 618.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 617.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 613.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 612.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 611.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 611.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 605.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 595.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 593.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 591.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 589.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 588.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 586.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 579.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 578.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 574.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 573.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 571.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 568.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 567.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 561.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 557.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 556.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 551.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 549.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 549.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 548.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 542.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 541.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 540.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 534.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 532.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 531.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 531.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 531.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 530.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 528.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 528.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 528.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 527.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 523.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 515.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 514.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 514.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 514.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 513.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 512.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 508.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 507.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 506.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 505.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 500.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 496.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 492.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 490.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 488.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 488.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 487.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 486.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 485.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 484.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 484.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 483.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 483.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 480.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 476.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 474.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 474.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 468.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 462.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 455.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 452.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 452.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 451.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 446.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 446.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 446.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 445.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 443.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 441.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 440.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 437.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 436.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 436.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 430.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 429.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 428.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 428.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 426.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 425.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 425.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 424.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 424.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 423.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 420.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 417.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 416.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 416.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 414.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 411.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 409.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 408.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 406.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 405.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 401.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 400.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 397.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 394.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 394.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 391.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 389.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 388.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 382.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 375.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 361.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 358.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 350.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 337.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 337.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 333.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 332.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 331.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 330.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 326.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 321.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 311.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 308.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 308.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 301.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 298.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 296.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 287.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 284.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 276.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 260.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 254.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 239.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 234.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 232.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 220.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 209.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 203.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 201.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 180.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 145.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 140.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 132.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 95.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

741.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 741.8
FF:10164-103B2 76 years, female 741.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

310.1
Pig sample Sample description nTPM
Caudate
nTPM: 310.1
Samples: 4

Max nTPM: 378.5
Min nTPM: 211.0
Sample A Female 211.0
Sample B Female 333.1
Sample C Male 378.5
Sample D Male 317.8

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