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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:29.6 nTPM
HPA Brain:186.4 nTPM
GTEx:29.6 nTPM
FANTOM5:289.3 Scaled Tags Per Million
Pig:54.5 nTPM
Mouse:34.0 nTPM
Allen mouse:5.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA037959Antibody HPA038448
Glial cells LowNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 76.1
2288 Male, age 75, left hemisphere 99.5
2481 Female, age 94, left hemisphere 84.2
1854 Male, age 80, left hemisphere 80.5
1781 Male, age 74, unknown 80.4
2846 Female, age 79, unknown 73.0
2290 Female, age 72, unknown 70.8
2289 Male, age 61, right hemisphere 68.5
1857 Female, age 85, left hemisphere 52.1
Globus pallidus, externus
nTPM: 184.0
2567 Female, age 72, unknown 243.7
2646 Male, age 61, right hemisphere 228.3
1996 Male, age 80, right hemisphere 181.4
2772 Female, age 79, unknown 152.8
2395 Male, age 75, both hemispheres 113.6
Globus pallidus, internus
nTPM: 186.4
2111 Female, age 85, right hemisphere 284.0
2566 Female, age 72, unknown 247.7
2778 Female, age 91, both hemispheres 190.6
2037 Male, age 80, right hemisphere 178.7
1818 Male, age 74, unknown 166.8
2287 Male, age 75, right hemisphere 126.3
2483 Female, age 94, right hemisphere 110.8
Nucleus accumbens
nTPM: 99.3
2391 Female, age 94, left hemisphere 154.2
2732 Male, age 80, right hemisphere 148.9
2698 Female, age 72, unknown 119.9
2286 Male, age 75, left hemisphere 88.1
1783 Male, age 74, unknown 82.9
1806 Female, age 85, left hemisphere 80.0
2824 Male, age 61, right hemisphere 74.0
1856 Female, age 91, right hemisphere 46.0
Nucleus basalis of Meynert
nTPM: 119.3
2569 Male, age 61, both hemispheres 203.1
2821 Male, age 75, both hemispheres 96.6
2484 Female, age 94, left hemisphere 90.2
2393 Male, age 80, right hemisphere 87.4
Nucleus of the diagonal band
nTPM: 41.0
1979 Male, age 74, unknown 50.4
2029 Male, age 61, right hemisphere 46.5
1812 Female, age 91, both hemispheres 41.7
2195 Female, age 85, both hemispheres 34.1
2775 Male, age 80, right hemisphere 32.1
Putamen
nTPM: 90.8
2489 Female, age 72, unknown 120.5
2647 Male, age 75, left hemisphere 110.0
1829 Male, age 74, unknown 106.1
2482 Female, age 94, left hemisphere 101.3
1937 Female, age 91, right hemisphere 77.0
2466 Female, age 79, unknown 72.5
1838 Male, age 80, right hemisphere 48.3
Septal nuclei
nTPM: 62.8
2394 Male, age 61, left hemisphere 124.7
2199 Male, age 80, right hemisphere 90.8
2059 Female, age 85, both hemispheres 68.7
2629 Female, age 94, right hemisphere 48.6
2009 Female, age 91, both hemispheres 44.6
2031 Female, age 72, unknown 35.1
1960 Male, age 74, unknown 27.5
Stria terminalis, bed nucleus
nTPM: 59.4
2201 Male, age 74, unknown 73.1
1974 Female, age 91, both hemispheres 64.4
2486 Female, age 94, both hemispheres 40.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 25.8
Samples: 246

Max nTPM: 63.9
Min nTPM: 4.3
Std nTPM: 10.7
Median nTPM: 24.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 63.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 58.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 52.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 49.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 49.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 47.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 46.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 46.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 44.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 43.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 43.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 43.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 43.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 43.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 42.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 41.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 41.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 41.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 41.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 40.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 40.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 40.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 40.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 40.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 40.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 39.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 39.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 37.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 37.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 37.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 37.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 36.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 36.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 36.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 36.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 36.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 35.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 35.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 35.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 35.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 34.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 34.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 34.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 33.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 33.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 33.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 33.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 33.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 32.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 32.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 32.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 32.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 31.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 31.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 31.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 31.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 30.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 30.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 30.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 29.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 29.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 29.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 29.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 28.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 28.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 28.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 28.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 28.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 28.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 28.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 28.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 27.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 27.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 27.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 27.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 27.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 27.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 27.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 27.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 27.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 27.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 27.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 26.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 26.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 26.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 26.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 26.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 26.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 26.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 26.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 26.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 26.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 25.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 25.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 25.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 25.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 25.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 25.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 25.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 24.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 24.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 24.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 24.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 24.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 24.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 24.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 24.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 23.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 23.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 23.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 23.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 23.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 23.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 23.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 23.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 23.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 23.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 23.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 23.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 22.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 22.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 22.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 22.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 22.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 22.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 22.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 21.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 21.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 21.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 21.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 21.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 21.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 21.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 20.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 20.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 20.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 20.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 20.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 20.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 20.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 20.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 20.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 20.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 20.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 20.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 19.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 19.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 19.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 19.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 19.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 18.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 18.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 18.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 18.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 18.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 18.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 18.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 18.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 18.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 18.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 17.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 17.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 17.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 17.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 17.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 17.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 17.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 17.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 17.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 17.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 17.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 16.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 16.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 16.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 16.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 16.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 16.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 15.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 15.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 15.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 15.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 15.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 15.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 15.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 15.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 15.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 14.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 14.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 14.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 14.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 14.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 14.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 14.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 14.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 13.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 13.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 13.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 13.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 13.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 13.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 13.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 13.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 13.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 13.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 13.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 12.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 12.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 12.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 12.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 11.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 10.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 10.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 10.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 9.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 8.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 7.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 6.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 6.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 5.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 4.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 17.3
Samples: 246

Max nTPM: 87.5
Min nTPM: 1.7
Std nTPM: 10.6
Median nTPM: 15.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 87.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 65.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 61.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 58.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 56.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 48.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 44.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 41.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 38.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 37.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 36.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 34.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 34.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 34.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 34.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 32.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 30.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 30.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 29.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 29.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 29.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 29.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 28.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 28.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 27.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 27.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 27.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 26.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 26.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 26.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 26.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 25.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 24.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 24.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 24.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 24.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 23.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 23.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 23.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 23.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 23.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 23.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 23.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 22.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 22.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 22.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 22.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 22.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 21.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 21.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 21.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 21.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 21.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 21.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 20.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 20.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 20.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 20.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 20.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 20.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 20.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 20.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 20.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 19.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 19.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 19.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 19.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 19.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 19.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 19.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 19.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 18.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 18.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 18.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 18.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 18.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 18.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 18.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 18.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 18.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 18.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 17.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 17.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 17.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 17.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 17.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 17.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 17.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 17.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 17.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 17.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 16.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 16.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 16.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 16.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 16.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 16.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 16.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 16.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 16.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 16.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 16.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 16.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 16.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 16.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 15.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 15.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 15.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 15.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 15.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 15.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 15.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 15.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 15.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 15.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 15.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 15.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 15.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 15.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 15.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 15.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 15.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 15.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 15.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 15.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 14.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 14.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 14.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 14.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 14.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 14.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 14.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 14.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 14.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 14.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 14.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 14.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 13.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 13.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 13.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 13.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 13.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 13.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 13.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 13.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 13.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 12.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 12.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 12.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 12.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 12.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 12.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 12.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 12.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 12.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 12.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 12.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 12.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 12.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 11.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 11.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 11.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 11.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 11.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 11.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 11.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 11.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 11.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 11.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 11.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 11.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 11.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 10.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 10.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 10.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 10.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 10.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 10.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 10.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 10.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 10.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 10.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 10.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 10.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 10.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 10.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 10.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 10.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 10.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 10.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 9.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 9.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 9.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 9.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 9.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 9.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 9.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 9.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 9.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 9.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 9.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 8.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 8.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 8.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 8.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 8.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 8.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 8.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 8.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 8.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 8.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 8.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 7.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 7.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 7.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 7.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 7.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 7.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 7.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 7.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 7.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 7.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 7.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 7.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 6.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 6.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 6.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 6.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 6.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 6.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 5.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 5.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 5.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 5.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 4.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1.7
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Brain - Putamen (basal ganglia)
Average nTPM: 29.6
Samples: 205

Max nTPM: 80.2
Min nTPM: 8.7
Std nTPM: 12.8
Median nTPM: 27.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 80.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 75.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 68.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 63.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 57.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 56.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 53.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 53.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 52.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 52.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 50.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 50.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 50.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 49.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 48.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 47.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 47.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 47.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 46.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 45.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 45.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 45.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 45.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 44.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 44.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 44.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 43.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 43.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 43.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 42.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 42.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 41.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 41.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 41.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 40.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 40.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 39.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 39.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 39.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 39.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 38.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 37.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 37.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 37.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 37.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 37.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 37.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 37.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 36.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 36.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 36.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 36.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 35.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 35.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 35.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 34.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 34.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 33.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 33.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 33.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 33.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 33.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 33.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 33.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 33.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 32.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 32.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 32.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 32.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 32.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 31.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 31.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 31.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 31.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 31.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 31.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 31.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 31.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 30.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 30.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 30.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 29.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 29.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 29.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 29.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 29.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 28.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 28.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 28.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 28.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 28.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 28.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 27.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 27.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 27.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 27.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 27.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 27.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 27.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 25.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 25.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 25.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 25.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 25.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 25.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 25.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 24.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 24.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 24.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 24.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 23.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 23.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 23.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 23.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 23.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 23.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 23.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 23.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 22.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 22.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 22.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 22.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 22.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 22.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 22.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 22.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 22.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 22.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 21.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 21.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 21.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 21.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 21.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 21.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 21.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 21.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 21.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 20.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 20.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 20.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 20.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 19.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 19.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 19.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 19.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 19.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 18.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 18.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 18.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 18.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 18.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 17.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 17.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 17.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 17.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 17.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 17.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 17.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 16.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 16.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 16.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 16.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 16.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 16.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 15.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 15.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 15.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 15.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 14.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 14.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 14.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 14.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 13.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 13.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 13.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 13.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 12.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 12.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 12.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 11.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 10.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 10.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 8.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

289.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 103.1
FF:10164-103B2 76 years, female 103.1
Nucleus accumbens
Scaled Tags Per Million: 157.0
FF:10037-101F1 23-56 years, mixed 157.0
Putamen
Scaled Tags Per Million: 93.9
FF:10176-103C5 60 years, female 93.9
Globus pallidus
Scaled Tags Per Million: 289.3
FF:10161-103A8 76 years, female 376.2
FF:10175-103C4 60 years, female 202.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.5
Pig sample Sample description nTPM
Caudate
nTPM: 27.2
Samples: 4

Max nTPM: 29.9
Min nTPM: 25.8
Sample A Female 25.8
Sample B Female 26.8
Sample C Male 26.1
Sample D Male 29.9
Putamen
nTPM: 54.3
Samples: 4

Max nTPM: 88.6
Min nTPM: 30.3
Sample A Female 88.6
Sample B Female 33.3
Sample C Male 30.3
Sample D Male 64.8
Septum
nTPM: 39.7
Samples: 4

Max nTPM: 48.8
Min nTPM: 31.7
Sample A Female 42.0
Sample B Female 31.7
Sample C Male 36.4
Sample D Male 48.8
Ventral pallidum
nTPM: 54.5
Samples: 4

Max nTPM: 79.4
Min nTPM: 26.4
Sample A Female 26.4
Sample B Female 38.1
Sample C Male 74.0
Sample D Male 79.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 34.0
Samples: 4

Max nTPM: 41.2
Min nTPM: 27.2
Sample A Male 33.9
Sample B Male 41.2
Sample C Female 33.6
Sample D Female 27.2
Septum
nTPM: 28.9
Samples: 4

Max nTPM: 38.6
Min nTPM: 21.6
Sample A Male 26.9
Sample B Male 21.6
Sample C Female 28.4
Sample D Female 38.6
Ventral forebrain
nTPM: 23.5
Samples: 4

Max nTPM: 26.8
Min nTPM: 20.4
Sample A Male 26.8
Sample B Male 21.8
Sample C Female 20.4
Sample D Female 25.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.2
69169851 Antisense, RP_050321_04_C12, Mouse strain C57BL/6J (56 days, male) 5.2
Pallidum
Expression energy: 5.0
69169851 Antisense, RP_050321_04_C12, Mouse strain C57BL/6J (56 days, male) 5.0

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