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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
653.6
nTPM
FANTOM5:
1105.3
Scaled Tags Per Million
Pig:
223.2
nTPM
Allen mouse:
0.7
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
653.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 603.7
2188
Female, age 91, both hemispheres
702.5
2301
Female, age 85, both hemispheres
693.5
2090
Male, age 80, both hemispheres
692.1
1984
Male, age 76, both hemispheres
326.6
Dorsal cochlear nucleus nTPM: 509.7
2187
Female, age 91, both hemispheres
659.3
2378
Male, age 80, both hemispheres
532.8
2370
Male, age 61, both hemispheres
528.6
2802
Male, age 74, right hemisphere
440.0
2058
Male, age 76, both hemispheres
387.5
Dorsal tegmental nucleus nTPM: 612.9
2358
Male, age 61, both hemispheres
1073.9
2326
Male, age 74, both hemispheres
591.6
1936
Male, age 76, left hemisphere
430.9
2083
Male, age 80, both hemispheres
355.4
Dorsolateral tegmental area nTPM: 653.6
2337
Male, age 61, both hemispheres
1501.6
2360
Male, age 74, both hemispheres
652.4
2654
Male, age 80, both hemispheres
442.3
2141
Male, age 76, both hemispheres
372.2
2751
Female, age 85, both hemispheres
299.3
Kolliker-Fuse nucleus nTPM: 589.6
2315
Male, age 76, right hemisphere
714.4
2793
Female, age 91, left hemisphere
638.2
2163
Male, age 80, both hemispheres
416.1
Lateral lemniscal nuclei nTPM: 360.6
2746
Female, age 85, left hemisphere
441.0
2320
Female, age 91, left hemisphere
399.2
2453
Male, age 74, right hemisphere
328.6
2036
Male, age 80, both hemispheres
322.5
2169
Male, age 76, both hemispheres
311.9
Lateral parabrachial nucleus nTPM: 602.6
2792
Male, age 76, both hemispheres
803.1
2013
Male, age 80, both hemispheres
702.0
2139
Female, age 85, right hemisphere
530.2
2790
Male, age 61, both hemispheres
375.0
Lateral vestibular nucleus nTPM: 571.7
2311
Male, age 80, both hemispheres
793.2
2184
Male, age 76, both hemispheres
350.3
Locus coeruleus nTPM: 396.9
2123
Female, age 91, both hemispheres
540.5
2720
Male, age 74, both hemispheres
478.5
2162
Male, age 80, both hemispheres
427.3
2317
Female, age 72, unknown
426.7
1980
Male, age 76, both hemispheres
342.6
2788
Male, age 74, unknown
337.6
2014
Male, age 55, unknown
225.3
Medial parabrachial nucleus nTPM: 438.7
2854
Male, age 80, both hemispheres
589.0
2170
Female, age 91, both hemispheres
491.8
2156
Male, age 61, both hemispheres
433.8
2786
Male, age 76, both hemispheres
412.8
2463
Female, age 85, right hemisphere
266.3
Medial periolivary nuclei nTPM: 464.2
2081
Male, age 80, both hemispheres
590.5
2791
Male, age 74, right hemisphere
550.1
2458
Female, age 91, both hemispheres
533.2
2063
Male, age 76, both hemispheres
360.4
2171
Female, age 85, both hemispheres
286.7
Motor facial nucleus nTPM: 438.8
2365
Male, age 74, right hemisphere
683.8
2697
Female, age 85, both hemispheres
600.1
2126
Male, age 61, both hemispheres
573.9
2062
Male, age 76, both hemispheres
304.3
2795
Female, age 91, both hemispheres
259.1
2327
Male, age 80, both hemispheres
211.3
Motor trigeminal nucleus nTPM: 497.5
2335
Male, age 61, both hemispheres
783.4
2321
Female, age 91, both hemispheres
539.8
2560
Male, age 74, both hemispheres
433.7
2079
Male, age 80, both hemispheres
396.7
2309
Male, age 76, both hemispheres
333.8
Nuclei of the trapezoid body nTPM: 323.5
1983
Male, age 76, both hemispheres
397.0
2166
Male, age 80, both hemispheres
364.6
2159
Male, age 61, both hemispheres
317.9
2735
Female, age 85, both hemispheres
292.8
2368
Female, age 91, both hemispheres
245.0
Nucleus raphe magnus nTPM: 362.2
2051
Male, age 76, both hemispheres
445.4
2455
Male, age 74, both hemispheres
394.1
2459
Female, age 91, both hemispheres
349.5
2172
Female, age 85, both hemispheres
344.6
2160
Male, age 61, both hemispheres
334.0
2328
Male, age 80, both hemispheres
305.4
Paramedian reticular nucleus nTPM: 386.5
2052
Male, age 76, both hemispheres
450.9
2313
Male, age 61, both hemispheres
429.0
2050
Female, age 85, both hemispheres
340.3
2057
Male, age 80, both hemispheres
325.9
Pedunculopontine tegmental nucleus nTPM: 606.1
2338
Male, age 61, both hemispheres
1153.9
2334
Male, age 80, both hemispheres
432.6
1921
Female, age 85, both hemispheres
231.9
Pontine nuclei nTPM: 391.2
2115
Male, age 80, left hemisphere
660.8
2319
Female, age 91, both hemispheres
577.3
2109
Female, age 72, unknown
450.5
2787
Female, age 85, both hemispheres
372.5
1968
Male, age 76, left hemisphere
288.0
2727
Male, age 61, right hemisphere
285.6
1863
Male, age 55, unknown
257.4
2454
Male, age 74, left hemisphere
237.5
Pontine raphe nucleus nTPM: 323.8
2853
Male, age 76, midline
344.4
2122
Female, age 85, midline
303.3
Posteroventral cochlear nucleus nTPM: 629.6
2135
Female, age 91, both hemispheres
900.3
2341
Male, age 80, both hemispheres
769.6
2371
Male, age 61, both hemispheres
620.6
2070
Male, age 76, both hemispheres
439.3
2752
Female, age 85, both hemispheres
418.0
Principal sensory trigeminal nucleus nTPM: 410.0
2367
Female, age 91, left hemisphere
544.3
2324
Male, age 76, both hemispheres
431.4
2158
Male, age 61, both hemispheres
354.2
2008
Male, age 80, left hemisphere
310.0
Reticular pontine nucleus, caudal nTPM: 368.5
2092
Male, age 76, both hemispheres
462.1
2457
Female, age 91, both hemispheres
389.3
2559
Male, age 74, both hemispheres
379.1
2332
Male, age 80, right hemisphere
243.6
Reticular pontine nucleus, oral nTPM: 325.1
2167
Male, age 76, both hemispheres
365.1
2366
Female, age 91, both hemispheres
353.1
1939
Male, age 80, both hemispheres
333.4
2361
Male, age 74, both hemispheres
317.6
2012
Female, age 85, both hemispheres
256.3
Reticulotegmental nucleus nTPM: 417.3
2322
Female, age 91, both hemispheres
455.1
2452
Male, age 74, both hemispheres
438.4
2333
Male, age 80, both hemispheres
421.6
2325
Male, age 76, both hemispheres
353.9
Spinal trigeminal nucleus, oral nTPM: 404.1
2164
Male, age 80, both hemispheres
487.5
2737
Female, age 85, both hemispheres
380.1
1978
Male, age 76, both hemispheres
344.7
Subcoeruleus area nTPM: 419.1
2451
Male, age 74, both hemispheres
606.4
2323
Female, age 91, left hemisphere
422.8
1958
Male, age 80, both hemispheres
359.4
2089
Male, age 76, left hemisphere
357.2
2369
Female, age 85, left hemisphere
349.6
Superior olive nTPM: 443.7
2561
Female, age 91, both hemispheres
606.1
2364
Male, age 74, right hemisphere
582.0
2020
Male, age 76, both hemispheres
466.6
2329
Male, age 80, right hemisphere
322.4
1875
Female, age 85, both hemispheres
241.4
Ventral periolivary nuclei nTPM: 464.3
2794
Female, age 91, left hemisphere
679.6
2023
Male, age 76, both hemispheres
497.6
2130
Female, age 85, both hemispheres
346.3
2165
Male, age 80, both hemispheres
333.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 477.1
2359
Male, age 61, both hemispheres
699.3
2840
Female, age 85, both hemispheres
492.3
2161
Male, age 80, both hemispheres
482.9
1959
Male, age 76, both hemispheres
424.8
2449
Male, age 74, both hemispheres
408.5
2456
Female, age 91, both hemispheres
355.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
223.2
Pig sample
Sample description
nTPM
Pons nTPM: 223.2
Samples: 4
Max nTPM: 281.1
Min nTPM: 161.1
Sample A
Female
261.8
Sample B
Female
161.1
Sample C
Male
188.9
Sample D
Male
281.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
