PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1001.4 nTPM
FANTOM5:1912.3 Scaled Tags Per Million
Pig:308.5 nTPM
Mouse:9.1 nTPM
Allen mouse:0.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1001.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 603.7
2188 Female, age 91, both hemispheres 702.5
2301 Female, age 85, both hemispheres 693.5
2090 Male, age 80, both hemispheres 692.1
1984 Male, age 76, both hemispheres 326.6
Area postrema
nTPM: 731.6
2799 Male, age 61, both hemispheres 877.5
2306 Male, age 80, both hemispheres 789.6
2054 Male, age 76, both hemispheres 527.6
Dorsal cochlear nucleus
nTPM: 509.7
2187 Female, age 91, both hemispheres 659.3
2378 Male, age 80, both hemispheres 532.8
2370 Male, age 61, both hemispheres 528.6
2802 Male, age 74, right hemisphere 440.0
2058 Male, age 76, both hemispheres 387.5
Dorsal medullary reticular nucleus
nTPM: 424.3
2373 Male, age 61, both hemispheres 511.6
2088 Male, age 76, both hemispheres 383.4
2040 Female, age 85, both hemispheres 377.9
Dorsal motor vagal complex
nTPM: 651.0
2807 Female, age 85, both hemispheres 1430.8
2643 Male, age 74, both hemispheres 881.3
2813 Female, age 72, unknown 869.5
2185 Male, age 76, both hemispheres 521.7
2133 Female, age 91, both hemispheres 514.8
2000 Male, age 74, unknown 464.0
2844 Male, age 55, unknown 303.1
2797 Male, age 61, both hemispheres 222.9
Dorsal tegmental nucleus
nTPM: 612.9
2358 Male, age 61, both hemispheres 1073.9
2326 Male, age 74, both hemispheres 591.6
1936 Male, age 76, left hemisphere 430.9
2083 Male, age 80, both hemispheres 355.4
Dorsolateral tegmental area
nTPM: 653.6
2337 Male, age 61, both hemispheres 1501.6
2360 Male, age 74, both hemispheres 652.4
2654 Male, age 80, both hemispheres 442.3
2141 Male, age 76, both hemispheres 372.2
2751 Female, age 85, both hemispheres 299.3
Gigantocellular reticular nuclei, medullary
nTPM: 389.1
2314 Male, age 61, both hemispheres 504.4
2310 Male, age 80, both hemispheres 490.7
2462 Male, age 74, both hemispheres 454.1
2022 Male, age 76, right hemisphere 338.8
1876 Female, age 85, both hemispheres 284.2
2387 Female, age 91, both hemispheres 262.1
Gigantocellular reticular nuclei, pars
nTPM: 404.6
2330 Male, age 80, both hemispheres 487.3
2706 Male, age 80, both hemispheres 469.0
2336 Male, age 61, both hemispheres 395.3
2084 Female, age 85, both hemispheres 391.6
2168 Male, age 76, both hemispheres 279.8
Inferior olive
nTPM: 601.8
2628 Female, age 91, both hemispheres 695.9
2178 Male, age 61, both hemispheres 680.1
2563 Male, age 74, both hemispheres 560.3
2379 Male, age 80, both hemispheres 550.0
2085 Female, age 85, both hemispheres 522.8
Kolliker-Fuse nucleus
nTPM: 589.6
2315 Male, age 76, right hemisphere 714.4
2793 Female, age 91, left hemisphere 638.2
2163 Male, age 80, both hemispheres 416.1
Lateral lemniscal nuclei
nTPM: 360.6
2746 Female, age 85, left hemisphere 441.0
2320 Female, age 91, left hemisphere 399.2
2453 Male, age 74, right hemisphere 328.6
2036 Male, age 80, both hemispheres 322.5
2169 Male, age 76, both hemispheres 311.9
Lateral medullary reticular nucleus
nTPM: 728.4
2305 Male, age 74, both hemispheres 1025.3
2374 Male, age 61, both hemispheres 816.7
2852 Male, age 80, both hemispheres 773.0
2190 Female, age 85, both hemispheres 704.1
2804 Female, age 91, both hemispheres 603.3
2044 Male, age 76, both hemispheres 448.2
Lateral parabrachial nucleus
nTPM: 602.6
2792 Male, age 76, both hemispheres 803.1
2013 Male, age 80, both hemispheres 702.0
2139 Female, age 85, right hemisphere 530.2
2790 Male, age 61, both hemispheres 375.0
Lateral vestibular nucleus
nTPM: 571.7
2311 Male, age 80, both hemispheres 793.2
2184 Male, age 76, both hemispheres 350.3
Locus coeruleus
nTPM: 396.9
2123 Female, age 91, both hemispheres 540.5
2720 Male, age 74, both hemispheres 478.5
2162 Male, age 80, both hemispheres 427.3
2317 Female, age 72, unknown 426.7
1980 Male, age 76, both hemispheres 342.6
2788 Male, age 74, unknown 337.6
2014 Male, age 55, unknown 225.3
Medial olivary nucleus
nTPM: 819.8
1943 Male, age 61, both hemispheres 1276.1
2851 Male, age 80, both hemispheres 803.2
1962 Male, age 76, both hemispheres 645.1
2138 Female, age 91, both hemispheres 554.5
Medial parabrachial nucleus
nTPM: 438.7
2854 Male, age 80, both hemispheres 589.0
2170 Female, age 91, both hemispheres 491.8
2156 Male, age 61, both hemispheres 433.8
2786 Male, age 76, both hemispheres 412.8
2463 Female, age 85, right hemisphere 266.3
Medial periolivary nuclei
nTPM: 464.2
2081 Male, age 80, both hemispheres 590.5
2791 Male, age 74, right hemisphere 550.1
2458 Female, age 91, both hemispheres 533.2
2063 Male, age 76, both hemispheres 360.4
2171 Female, age 85, both hemispheres 286.7
Medial vestibular nucleus
nTPM: 475.3
2624 Male, age 61, both hemispheres 814.0
2801 Male, age 74, both hemispheres 545.7
2743 Female, age 85, both hemispheres 451.0
2134 Male, age 76, both hemispheres 430.6
2093 Male, age 80, both hemispheres 331.5
2803 Female, age 91, both hemispheres 278.7
Motor facial nucleus
nTPM: 438.8
2365 Male, age 74, right hemisphere 683.8
2697 Female, age 85, both hemispheres 600.1
2126 Male, age 61, both hemispheres 573.9
2062 Male, age 76, both hemispheres 304.3
2795 Female, age 91, both hemispheres 259.1
2327 Male, age 80, both hemispheres 211.3
Motor hypoglossal nucleus
nTPM: 532.2
2182 Male, age 80, both hemispheres 761.7
2132 Female, age 85, both hemispheres 628.1
2461 Male, age 61, both hemispheres 524.4
2277 Male, age 76, both hemispheres 521.6
2125 Female, age 91, both hemispheres 225.2
Motor trigeminal nucleus
nTPM: 497.5
2335 Male, age 61, both hemispheres 783.4
2321 Female, age 91, both hemispheres 539.8
2560 Male, age 74, both hemispheres 433.7
2079 Male, age 80, both hemispheres 396.7
2309 Male, age 76, both hemispheres 333.8
Nuclei of the trapezoid body
nTPM: 323.5
1983 Male, age 76, both hemispheres 397.0
2166 Male, age 80, both hemispheres 364.6
2159 Male, age 61, both hemispheres 317.9
2735 Female, age 85, both hemispheres 292.8
2368 Female, age 91, both hemispheres 245.0
Nucleus ambiguus
nTPM: 623.9
2071 Male, age 76, both hemispheres 659.9
2096 Female, age 85, both hemispheres 587.9
Nucleus cuneatus
nTPM: 567.4
2808 Female, age 85, both hemispheres 1090.1
2564 Male, age 74, both hemispheres 711.0
2376 Male, age 61, both hemispheres 598.7
2380 Male, age 80, both hemispheres 569.1
2381 Male, age 80, both hemispheres 486.3
2131 Male, age 76, both hemispheres 435.4
2562 Male, age 61, both hemispheres 420.6
2100 Male, age 76, both hemispheres 419.3
2805 Female, age 91, both hemispheres 376.0
Nucleus gracilis
nTPM: 913.2
2299 Female, age 85, both hemispheres 1232.2
2627 Male, age 74, both hemispheres 928.9
2382 Male, age 80, both hemispheres 578.6
Nucleus raphe magnus
nTPM: 362.2
2051 Male, age 76, both hemispheres 445.4
2455 Male, age 74, both hemispheres 394.1
2459 Female, age 91, both hemispheres 349.5
2172 Female, age 85, both hemispheres 344.6
2160 Male, age 61, both hemispheres 334.0
2328 Male, age 80, both hemispheres 305.4
Nucleus raphe obscurus
nTPM: 597.0
2142 Male, age 76, midline 635.9
2845 Female, age 85, midline 597.2
2800 Male, age 61, midline 557.9
Nucleus raphe pallidus
nTPM: 1001.4
1924 Male, age 61, midline 1768.8
2145 Male, age 76, midline 653.6
2183 Male, age 80, midline 581.7
Nucleus tractus solitarii
nTPM: 709.2
2191 Female, age 85, both hemispheres 1337.2
2307 Male, age 80, both hemispheres 660.4
2656 Male, age 76, both hemispheres 435.4
2144 Female, age 91, right hemisphere 403.8
Paramedian reticular nucleus
nTPM: 386.5
2052 Male, age 76, both hemispheres 450.9
2313 Male, age 61, both hemispheres 429.0
2050 Female, age 85, both hemispheres 340.3
2057 Male, age 80, both hemispheres 325.9
Parvicellular reticular nuclei
nTPM: 400.1
2119 Male, age 80, both hemispheres 451.9
2095 Male, age 76, both hemispheres 402.7
2558 Male, age 74, both hemispheres 345.6
Parvicellular reticular nuclei, medullary
nTPM: 454.7
2091 Female, age 85, both hemispheres 623.6
2181 Male, age 80, left hemisphere 370.4
2189 Female, age 91, both hemispheres 370.1
Pedunculopontine tegmental nucleus
nTPM: 606.1
2338 Male, age 61, both hemispheres 1153.9
2334 Male, age 80, both hemispheres 432.6
1921 Female, age 85, both hemispheres 231.9
Peritrigeminal nucleus
nTPM: 841.1
2067 Female, age 85, both hemispheres 1154.3
2179 Male, age 61, both hemispheres 761.0
2136 Male, age 76, both hemispheres 608.1
Pontine nuclei
nTPM: 391.2
2115 Male, age 80, left hemisphere 660.8
2319 Female, age 91, both hemispheres 577.3
2109 Female, age 72, unknown 450.5
2787 Female, age 85, both hemispheres 372.5
1968 Male, age 76, left hemisphere 288.0
2727 Male, age 61, right hemisphere 285.6
1863 Male, age 55, unknown 257.4
2454 Male, age 74, left hemisphere 237.5
Pontine raphe nucleus
nTPM: 323.8
2853 Male, age 76, midline 344.4
2122 Female, age 85, midline 303.3
Posteroventral cochlear nucleus
nTPM: 629.6
2135 Female, age 91, both hemispheres 900.3
2341 Male, age 80, both hemispheres 769.6
2371 Male, age 61, both hemispheres 620.6
2070 Male, age 76, both hemispheres 439.3
2752 Female, age 85, both hemispheres 418.0
Prepositus hypoglossal nucleus
nTPM: 534.2
2086 Male, age 80, both hemispheres 659.3
2855 Female, age 85, right hemisphere 409.1
Principal sensory trigeminal nucleus
nTPM: 410.0
2367 Female, age 91, left hemisphere 544.3
2324 Male, age 76, both hemispheres 431.4
2158 Male, age 61, both hemispheres 354.2
2008 Male, age 80, left hemisphere 310.0
Reticular pontine nucleus, caudal
nTPM: 368.5
2092 Male, age 76, both hemispheres 462.1
2457 Female, age 91, both hemispheres 389.3
2559 Male, age 74, both hemispheres 379.1
2332 Male, age 80, right hemisphere 243.6
Reticular pontine nucleus, oral
nTPM: 325.1
2167 Male, age 76, both hemispheres 365.1
2366 Female, age 91, both hemispheres 353.1
1939 Male, age 80, both hemispheres 333.4
2361 Male, age 74, both hemispheres 317.6
2012 Female, age 85, both hemispheres 256.3
Reticulotegmental nucleus
nTPM: 417.3
2322 Female, age 91, both hemispheres 455.1
2452 Male, age 74, both hemispheres 438.4
2333 Male, age 80, both hemispheres 421.6
2325 Male, age 76, both hemispheres 353.9
Spinal trigeminal nucleus, caudal
nTPM: 711.2
2312 Male, age 61, both hemispheres 1093.6
2642 Male, age 74, both hemispheres 1043.9
2308 Male, age 80, both hemispheres 631.2
2447 Male, age 76, both hemispheres 404.6
2390 Female, age 91, both hemispheres 383.0
Spinal trigeminal nucleus, interpolar
nTPM: 539.7
2386 Female, age 85, both hemispheres 763.8
2033 Male, age 80, both hemispheres 555.3
2625 Male, age 61, both hemispheres 497.5
2389 Female, age 91, both hemispheres 485.5
2066 Male, age 76, right hemisphere 396.3
Spinal trigeminal nucleus, oral
nTPM: 404.1
2164 Male, age 80, both hemispheres 487.5
2737 Female, age 85, both hemispheres 380.1
1978 Male, age 76, both hemispheres 344.7
Spinal vestibular nucleus
nTPM: 428.6
2796 Male, age 61, both hemispheres 638.5
2780 Male, age 80, both hemispheres 473.3
2806 Female, age 85, both hemispheres 456.0
2384 Male, age 74, both hemispheres 371.9
2748 Male, age 76, both hemispheres 343.9
2186 Female, age 91, both hemispheres 287.9
Subcoeruleus area
nTPM: 419.1
2451 Male, age 74, both hemispheres 606.4
2323 Female, age 91, left hemisphere 422.8
1958 Male, age 80, both hemispheres 359.4
2089 Male, age 76, left hemisphere 357.2
2369 Female, age 85, left hemisphere 349.6
Superior olive
nTPM: 443.7
2561 Female, age 91, both hemispheres 606.1
2364 Male, age 74, right hemisphere 582.0
2020 Male, age 76, both hemispheres 466.6
2329 Male, age 80, right hemisphere 322.4
1875 Female, age 85, both hemispheres 241.4
Superior vestibular nucleus
nTPM: 592.4
2383 Male, age 74, both hemispheres 643.7
2015 Male, age 80, both hemispheres 580.5
2061 Male, age 76, both hemispheres 553.1
Ventral medullary reticular nucleus
nTPM: 380.9
2372 Male, age 61, both hemispheres 402.9
2060 Male, age 76, both hemispheres 358.8
Ventral periolivary nuclei
nTPM: 464.3
2794 Female, age 91, left hemisphere 679.6
2023 Male, age 76, both hemispheres 497.6
2130 Female, age 85, both hemispheres 346.3
2165 Male, age 80, both hemispheres 333.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 667.5
2118 Male, age 80, both hemispheres 758.8
2741 Female, age 85, both hemispheres 708.7
2302 Female, age 91, both hemispheres 698.4
2180 Male, age 61, both hemispheres 683.5
1986 Male, age 76, both hemispheres 488.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 477.1
2359 Male, age 61, both hemispheres 699.3
2840 Female, age 85, both hemispheres 492.3
2161 Male, age 80, both hemispheres 482.9
1959 Male, age 76, both hemispheres 424.8
2449 Male, age 74, both hemispheres 408.5
2456 Female, age 91, both hemispheres 355.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1912.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1105.3
FF:10165-103B3 76 years, female 1471.3
FF:10182-103D2 60 years, female 739.3
Medulla oblongata
Scaled Tags Per Million: 1912.3
FF:10155-103A2 76 years, female 2337.9
FF:10038-101F2 18-64 years, mixed 2106.0
FF:10174-103C3 60 years, female 1293.2
Pons
Scaled Tags Per Million: 961.2
FF:10033-101E6 18-54 years, mixed 961.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 308.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 308.5
Samples: 4

Max nTPM: 422.7
Min nTPM: 237.4
Sample A Female 251.3
Sample B Female 237.4
Sample C Male 322.5
Sample D Male 422.7
Pons
nTPM: 223.2
Samples: 4

Max nTPM: 281.1
Min nTPM: 161.1
Sample A Female 261.8
Sample B Female 161.1
Sample C Male 188.9
Sample D Male 281.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 9.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 9.2
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.1
Sample A Male 8.1
Sample B Male 8.7
Sample C Female 10.1
Sample D Female 9.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.6
67979029 Antisense, RP_040923_02_A10, Mouse strain C57BL/6J (56 days, male) 0.6
Pons
Expression energy: 0.7
67979029 Antisense, RP_040923_02_A10, Mouse strain C57BL/6J (56 days, male) 0.7

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