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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:891.0 nTPM
HPA Brain:981.5 nTPM
GTEx:891.0 nTPM
FANTOM5:2499.7 Scaled Tags Per Million
Pig:407.6 nTPM
Mouse:688.5 nTPM
Allen mouse:20.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023676
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

981.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 838.0
1857 Female, age 85, left hemisphere 1108.9
2290 Female, age 72, unknown 1005.3
2289 Male, age 61, right hemisphere 946.5
1854 Male, age 80, left hemisphere 855.7
1781 Male, age 74, unknown 821.4
2846 Female, age 79, unknown 812.4
2288 Male, age 75, left hemisphere 664.0
2481 Female, age 94, left hemisphere 489.6
Globus pallidus, externus
nTPM: 150.8
2646 Male, age 61, right hemisphere 205.3
2395 Male, age 75, both hemispheres 169.7
2772 Female, age 79, unknown 167.7
2567 Female, age 72, unknown 121.6
1996 Male, age 80, right hemisphere 89.6
Globus pallidus, internus
nTPM: 139.5
2483 Female, age 94, right hemisphere 307.9
1818 Male, age 74, unknown 156.7
2287 Male, age 75, right hemisphere 125.6
2566 Female, age 72, unknown 116.7
2037 Male, age 80, right hemisphere 104.9
2778 Female, age 91, both hemispheres 90.6
2111 Female, age 85, right hemisphere 73.9
Nucleus accumbens
nTPM: 981.5
1856 Female, age 91, right hemisphere 1686.2
2824 Male, age 61, right hemisphere 1432.5
1783 Male, age 74, unknown 1352.1
1806 Female, age 85, left hemisphere 1175.0
2698 Female, age 72, unknown 773.4
2286 Male, age 75, left hemisphere 671.0
2391 Female, age 94, left hemisphere 393.8
2732 Male, age 80, right hemisphere 368.1
Nucleus basalis of Meynert
nTPM: 510.9
2484 Female, age 94, left hemisphere 759.1
2393 Male, age 80, right hemisphere 619.7
2821 Male, age 75, both hemispheres 409.7
2569 Male, age 61, both hemispheres 254.9
Nucleus of the diagonal band
nTPM: 478.6
1979 Male, age 74, unknown 596.2
1812 Female, age 91, both hemispheres 544.3
2029 Male, age 61, right hemisphere 453.3
2775 Male, age 80, right hemisphere 407.0
2195 Female, age 85, both hemispheres 392.4
Putamen
nTPM: 809.3
1937 Female, age 91, right hemisphere 1256.1
1838 Male, age 80, right hemisphere 1106.8
2466 Female, age 79, unknown 854.6
1829 Male, age 74, unknown 840.7
2482 Female, age 94, left hemisphere 570.3
2489 Female, age 72, unknown 559.0
2647 Male, age 75, left hemisphere 477.8
Septal nuclei
nTPM: 421.1
2009 Female, age 91, both hemispheres 476.6
1960 Male, age 74, unknown 467.4
2031 Female, age 72, unknown 466.1
2199 Male, age 80, right hemisphere 401.6
2394 Male, age 61, left hemisphere 389.1
2059 Female, age 85, both hemispheres 388.5
2629 Female, age 94, right hemisphere 358.4
Stria terminalis, bed nucleus
nTPM: 434.1
2486 Female, age 94, both hemispheres 566.6
1974 Female, age 91, both hemispheres 495.3
2201 Male, age 74, unknown 240.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

891.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 599.5
Samples: 246

Max nTPM: 1603.0
Min nTPM: 61.2
Std nTPM: 340.9
Median nTPM: 575.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1603.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1554.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1335.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1334.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1278.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1262.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1261.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1252.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1244.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1239.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1204.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1203.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1199.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1198.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1193.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1182.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1176.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1168.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1143.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1131.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1130.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1114.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1113.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1112.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1111.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1097.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1096.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1093.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1064.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1039.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1039.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1031.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1029.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1024.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1011.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1004.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 996.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 989.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 972.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 966.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 933.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 928.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 928.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 927.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 920.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 920.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 919.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 916.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 907.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 907.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 880.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 878.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 877.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 876.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 873.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 870.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 864.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 860.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 859.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 857.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 854.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 849.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 848.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 842.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 837.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 834.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 824.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 821.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 815.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 812.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 812.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 796.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 795.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 790.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 781.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 779.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 775.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 770.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 761.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 754.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 752.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 749.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 742.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 734.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 731.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 726.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 724.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 722.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 720.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 720.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 716.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 711.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 711.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 705.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 688.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 687.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 684.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 683.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 679.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 661.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 656.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 653.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 651.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 649.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 646.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 637.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 633.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 628.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 626.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 625.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 623.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 621.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 613.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 612.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 597.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 594.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 589.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 584.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 582.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 581.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 579.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 578.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 578.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 572.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 559.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 558.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 557.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 551.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 546.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 539.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 535.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 532.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 532.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 525.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 523.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 521.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 521.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 518.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 517.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 516.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 516.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 513.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 500.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 491.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 487.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 482.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 477.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 477.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 476.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 470.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 464.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 458.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 457.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 444.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 442.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 439.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 438.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 432.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 431.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 429.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 427.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 417.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 413.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 407.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 396.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 394.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 392.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 389.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 368.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 365.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 359.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 354.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 353.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 340.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 332.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 331.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 329.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 323.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 322.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 320.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 320.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 311.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 300.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 296.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 290.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 288.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 287.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 282.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 279.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 274.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 271.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 270.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 269.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 269.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 265.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 259.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 251.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 248.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 248.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 244.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 235.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 233.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 230.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 226.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 225.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 225.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 219.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 218.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 214.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 207.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 206.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 204.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 204.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 193.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 193.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 187.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 185.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 180.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 178.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 178.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 177.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 176.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 173.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 168.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 164.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 164.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 158.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 149.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 146.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 146.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 141.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 138.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 136.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 132.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 130.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 126.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 118.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 114.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 112.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 111.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 98.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 74.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 64.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 64.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 61.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 891.0
Samples: 246

Max nTPM: 2010.0
Min nTPM: 25.8
Std nTPM: 471.5
Median nTPM: 969.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2010.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1864.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1824.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1792.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1792.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1788.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1746.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1706.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1674.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1669.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1624.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1622.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1615.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1599.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1585.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1577.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1575.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1564.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1563.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1551.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1533.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1514.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1466.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1460.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1452.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1452.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1437.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1435.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1427.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1423.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1419.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1397.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1395.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1389.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1386.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1386.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1380.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1379.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1376.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1362.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1355.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1349.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1349.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1349.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1337.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1337.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1333.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1331.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1331.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1330.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1321.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1319.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1311.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1301.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1301.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1297.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1295.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1294.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1288.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1283.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1283.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1278.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1270.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1255.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1248.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1246.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1235.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1215.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1212.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1212.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1200.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1197.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1188.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1187.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1182.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1175.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1173.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1168.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1149.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1147.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1143.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1142.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1133.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1127.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1126.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1126.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1115.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1115.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1114.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1112.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1110.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1110.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1109.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1104.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1086.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1085.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1071.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 1071.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 1068.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1060.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1058.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1053.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1044.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1043.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1034.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1029.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1027.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1025.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 1019.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1018.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1014.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1012.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1008.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1003.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1000.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 999.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 995.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 986.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 982.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 978.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 974.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 974.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 971.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 967.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 951.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 939.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 934.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 932.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 927.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 926.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 915.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 911.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 910.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 868.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 867.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 866.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 865.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 863.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 858.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 853.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 853.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 849.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 829.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 822.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 818.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 817.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 803.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 802.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 800.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 793.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 772.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 759.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 747.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 746.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 738.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 737.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 733.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 732.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 729.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 726.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 726.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 722.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 708.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 701.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 696.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 687.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 677.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 675.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 673.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 653.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 631.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 612.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 594.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 591.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 572.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 554.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 547.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 519.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 503.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 495.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 493.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 480.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 474.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 465.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 461.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 460.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 451.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 414.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 414.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 413.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 413.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 403.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 400.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 397.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 392.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 386.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 367.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 365.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 363.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 352.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 347.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 338.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 335.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 323.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 323.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 302.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 300.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 298.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 296.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 282.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 278.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 273.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 267.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 266.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 262.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 258.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 255.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 250.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 234.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 225.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 221.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 210.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 205.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 198.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 198.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 185.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 174.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 167.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 167.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 144.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 141.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 139.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 134.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 131.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 129.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 101.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 97.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 83.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 83.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 76.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 70.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 62.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 56.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 52.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 43.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 25.8
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Brain - Putamen (basal ganglia)
Average nTPM: 545.6
Samples: 205

Max nTPM: 1405.4
Min nTPM: 43.0
Std nTPM: 328.1
Median nTPM: 513.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1405.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1354.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1318.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1264.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1195.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1179.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1177.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1167.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1156.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1145.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1130.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1122.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1093.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1087.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1077.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1015.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1004.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 998.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 987.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 972.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 966.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 962.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 957.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 955.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 949.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 946.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 942.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 934.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 932.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 924.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 922.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 912.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 906.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 901.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 898.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 894.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 893.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 893.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 889.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 887.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 886.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 871.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 867.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 858.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 851.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 849.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 842.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 839.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 837.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 835.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 828.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 828.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 820.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 813.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 789.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 778.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 763.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 762.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 752.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 744.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 739.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 730.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 728.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 716.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 713.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 711.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 711.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 703.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 701.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 700.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 690.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 689.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 681.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 679.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 666.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 648.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 647.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 643.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 641.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 639.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 638.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 633.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 631.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 621.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 612.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 612.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 611.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 611.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 610.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 595.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 589.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 588.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 573.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 570.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 557.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 545.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 541.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 530.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 526.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 525.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 517.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 517.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 513.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 501.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 500.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 498.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 497.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 494.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 492.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 476.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 474.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 470.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 466.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 461.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 449.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 448.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 438.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 434.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 427.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 427.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 425.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 418.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 418.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 406.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 403.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 378.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 372.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 370.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 370.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 367.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 366.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 364.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 362.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 359.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 340.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 340.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 323.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 315.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 310.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 304.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 303.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 302.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 299.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 297.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 281.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 277.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 274.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 272.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 269.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 267.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 266.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 265.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 260.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 257.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 247.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 245.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 243.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 231.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 230.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 222.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 216.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 214.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 209.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 205.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 197.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 196.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 193.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 192.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 191.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 182.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 180.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 179.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 173.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 172.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 169.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 167.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 166.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 166.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 163.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 161.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 158.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 154.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 149.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 148.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 147.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 142.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 138.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 129.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 127.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 125.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 123.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 106.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 105.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 104.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 102.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 101.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 98.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 97.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 96.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 82.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 77.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 72.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 62.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 51.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 43.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2499.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1623.7
FF:10164-103B2 76 years, female 1623.7
Nucleus accumbens
Scaled Tags Per Million: 1317.1
FF:10037-101F1 23-56 years, mixed 1317.1
Putamen
Scaled Tags Per Million: 2499.7
FF:10176-103C5 60 years, female 2499.7
Globus pallidus
Scaled Tags Per Million: 485.4
FF:10175-103C4 60 years, female 786.3
FF:10161-103A8 76 years, female 184.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

407.6
Pig sample Sample description nTPM
Caudate
nTPM: 407.7
Samples: 4

Max nTPM: 501.0
Min nTPM: 271.5
Sample A Female 271.5
Sample B Female 426.1
Sample C Male 501.0
Sample D Male 432.0
Putamen
nTPM: 372.9
Samples: 4

Max nTPM: 548.9
Min nTPM: 141.9
Sample A Female 141.9
Sample B Female 354.2
Sample C Male 548.9
Sample D Male 446.7
Septum
nTPM: 294.1
Samples: 4

Max nTPM: 362.5
Min nTPM: 156.3
Sample A Female 362.5
Sample B Female 327.3
Sample C Male 156.3
Sample D Male 330.3
Ventral pallidum
nTPM: 292.6
Samples: 4

Max nTPM: 405.1
Min nTPM: 208.8
Sample A Female 405.1
Sample B Female 255.7
Sample C Male 208.8
Sample D Male 300.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

688.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 688.5
Samples: 4

Max nTPM: 827.0
Min nTPM: 578.3
Sample A Male 716.0
Sample B Male 827.0
Sample C Female 578.3
Sample D Female 632.5
Septum
nTPM: 581.6
Samples: 4

Max nTPM: 661.9
Min nTPM: 503.6
Sample A Male 503.6
Sample B Male 645.9
Sample C Female 515.0
Sample D Female 661.9
Ventral forebrain
nTPM: 496.8
Samples: 4

Max nTPM: 544.9
Min nTPM: 452.6
Sample A Male 494.0
Sample B Male 452.6
Sample C Female 544.9
Sample D Female 495.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 20.8
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 20.8
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 20.8
Pallidum
Expression energy: 17.3
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 17.3
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 15.7

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