PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		64.107
Mouse brain, Intensity
Ponsi 		67.649
RNA expressioni
HPA Brain:331.5 nTPM
FANTOM5:488.3 Scaled Tags Per Million
Pig:246.8 nTPM
Mouse:170.3 nTPM
Allen mouse:14.7 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA023676
Medulla oblongata mean intensity 64.107
intensityi
FRONT BACK
Nucleus of the solitary tract 35.973
Raphe magnus nucleus 35.181
Cochlear nucleus 33.840
Lateral paragigantocellular nucleus 64.107
Raphe pallidus nucleus 25.962
Facial nucleus 27.076
Hypoglossal nucleus 31.013
Ambiguus nucleus 30.489
External cuneate nucleus 24.002
Inferior olivary nucleus 17.809
Raphe obscures nucleus 25.245
Dorsal motor nucleus of vagus 52.737
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 47.120
Parabrachial nucleus -
Principle sensory trigeminal nucleus 31.352
Locus coeruleus 67.649
Pontine nucleus 24.251
Vestibular nucleus 31.137
Pontine reticular nucleus, oral 23.690
Lateral lemniscus 31.278
Superior paraolivary nucleus 28.285

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 331.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 153.9
2301 Female, age 85, both hemispheres 174.1
1984 Male, age 76, both hemispheres 166.7
2090 Male, age 80, both hemispheres 138.4
2188 Female, age 91, both hemispheres 136.5
Area postrema
nTPM: 94.8
2054 Male, age 76, both hemispheres 143.4
2799 Male, age 61, both hemispheres 72.9
2306 Male, age 80, both hemispheres 68.0
Dorsal cochlear nucleus
nTPM: 173.4
2370 Male, age 61, both hemispheres 214.3
2058 Male, age 76, both hemispheres 202.8
2802 Male, age 74, right hemisphere 164.4
2187 Female, age 91, both hemispheres 162.1
2378 Male, age 80, both hemispheres 123.4
Dorsal medullary reticular nucleus
nTPM: 217.9
2040 Female, age 85, both hemispheres 267.9
2088 Male, age 76, both hemispheres 206.2
2373 Male, age 61, both hemispheres 179.5
Dorsal motor vagal complex
nTPM: 185.2
2133 Female, age 91, both hemispheres 222.9
2844 Male, age 55, unknown 222.5
2000 Male, age 74, unknown 215.8
2813 Female, age 72, unknown 205.8
2643 Male, age 74, both hemispheres 162.7
2797 Male, age 61, both hemispheres 161.9
2185 Male, age 76, both hemispheres 156.8
2807 Female, age 85, both hemispheres 133.3
Dorsal tegmental nucleus
nTPM: 172.7
2083 Male, age 80, both hemispheres 208.3
1936 Male, age 76, left hemisphere 178.2
2358 Male, age 61, both hemispheres 164.6
2326 Male, age 74, both hemispheres 139.6
Dorsolateral tegmental area
nTPM: 164.2
2654 Male, age 80, both hemispheres 209.6
2141 Male, age 76, both hemispheres 194.0
2751 Female, age 85, both hemispheres 172.3
2360 Male, age 74, both hemispheres 150.3
2337 Male, age 61, both hemispheres 94.8
Gigantocellular reticular nuclei, medullary
nTPM: 241.7
2462 Male, age 74, both hemispheres 437.7
2022 Male, age 76, right hemisphere 277.6
2310 Male, age 80, both hemispheres 230.6
1876 Female, age 85, both hemispheres 219.4
2387 Female, age 91, both hemispheres 160.1
2314 Male, age 61, both hemispheres 125.0
Gigantocellular reticular nuclei, pars
nTPM: 238.3
2168 Male, age 76, both hemispheres 332.2
2084 Female, age 85, both hemispheres 257.4
2336 Male, age 61, both hemispheres 239.1
2706 Male, age 80, both hemispheres 183.0
2330 Male, age 80, both hemispheres 180.0
Inferior olive
nTPM: 107.2
2085 Female, age 85, both hemispheres 136.9
2628 Female, age 91, both hemispheres 122.3
2563 Male, age 74, both hemispheres 101.9
2178 Male, age 61, both hemispheres 88.9
2379 Male, age 80, both hemispheres 85.7
Kolliker-Fuse nucleus
nTPM: 179.7
2163 Male, age 80, both hemispheres 233.2
2793 Female, age 91, left hemisphere 191.2
2315 Male, age 76, right hemisphere 114.6
Lateral lemniscal nuclei
nTPM: 304.5
2453 Male, age 74, right hemisphere 343.9
2036 Male, age 80, both hemispheres 343.0
2169 Male, age 76, both hemispheres 319.6
2746 Female, age 85, left hemisphere 312.2
2320 Female, age 91, left hemisphere 204.0
Lateral medullary reticular nucleus
nTPM: 156.7
2044 Male, age 76, both hemispheres 231.5
2804 Female, age 91, both hemispheres 170.3
2374 Male, age 61, both hemispheres 148.7
2190 Female, age 85, both hemispheres 143.3
2852 Male, age 80, both hemispheres 124.6
2305 Male, age 74, both hemispheres 121.9
Lateral parabrachial nucleus
nTPM: 216.2
2139 Female, age 85, right hemisphere 333.7
2790 Male, age 61, both hemispheres 234.1
2013 Male, age 80, both hemispheres 200.9
2792 Male, age 76, both hemispheres 96.0
Lateral vestibular nucleus
nTPM: 193.5
2184 Male, age 76, both hemispheres 214.1
2311 Male, age 80, both hemispheres 172.9
Locus coeruleus
nTPM: 243.7
2123 Female, age 91, both hemispheres 285.3
2317 Female, age 72, unknown 269.1
2720 Male, age 74, both hemispheres 254.1
2014 Male, age 55, unknown 246.2
1980 Male, age 76, both hemispheres 232.2
2162 Male, age 80, both hemispheres 209.9
2788 Male, age 74, unknown 209.2
Medial olivary nucleus
nTPM: 84.5
2851 Male, age 80, both hemispheres 113.1
2138 Female, age 91, both hemispheres 86.1
1962 Male, age 76, both hemispheres 78.5
1943 Male, age 61, both hemispheres 60.2
Medial parabrachial nucleus
nTPM: 201.0
2156 Male, age 61, both hemispheres 249.2
2854 Male, age 80, both hemispheres 198.8
2786 Male, age 76, both hemispheres 193.2
2170 Female, age 91, both hemispheres 186.6
2463 Female, age 85, right hemisphere 177.0
Medial periolivary nuclei
nTPM: 278.0
2171 Female, age 85, both hemispheres 422.3
2063 Male, age 76, both hemispheres 345.2
2791 Male, age 74, right hemisphere 275.9
2081 Male, age 80, both hemispheres 179.4
2458 Female, age 91, both hemispheres 167.0
Medial vestibular nucleus
nTPM: 220.3
2093 Male, age 80, both hemispheres 253.2
2803 Female, age 91, both hemispheres 234.5
2624 Male, age 61, both hemispheres 224.2
2801 Male, age 74, both hemispheres 206.2
2134 Male, age 76, both hemispheres 205.9
2743 Female, age 85, both hemispheres 197.8
Motor facial nucleus
nTPM: 270.7
2062 Male, age 76, both hemispheres 380.2
2365 Male, age 74, right hemisphere 313.2
2327 Male, age 80, both hemispheres 278.0
2697 Female, age 85, both hemispheres 241.8
2795 Female, age 91, both hemispheres 209.4
2126 Male, age 61, both hemispheres 201.4
Motor hypoglossal nucleus
nTPM: 205.6
2132 Female, age 85, both hemispheres 248.9
2125 Female, age 91, both hemispheres 235.6
2461 Male, age 61, both hemispheres 194.3
2277 Male, age 76, both hemispheres 189.7
2182 Male, age 80, both hemispheres 159.5
Motor trigeminal nucleus
nTPM: 241.3
2079 Male, age 80, both hemispheres 287.0
2560 Male, age 74, both hemispheres 285.6
2335 Male, age 61, both hemispheres 250.1
2309 Male, age 76, both hemispheres 223.0
2321 Female, age 91, both hemispheres 161.0
Nuclei of the trapezoid body
nTPM: 327.1
2735 Female, age 85, both hemispheres 465.1
2159 Male, age 61, both hemispheres 386.0
1983 Male, age 76, both hemispheres 339.3
2166 Male, age 80, both hemispheres 239.2
2368 Female, age 91, both hemispheres 205.8
Nucleus ambiguus
nTPM: 269.3
2096 Female, age 85, both hemispheres 439.2
2071 Male, age 76, both hemispheres 99.4
Nucleus cuneatus
nTPM: 173.0
2131 Male, age 76, both hemispheres 297.0
2100 Male, age 76, both hemispheres 235.5
2562 Male, age 61, both hemispheres 219.2
2564 Male, age 74, both hemispheres 176.0
2381 Male, age 80, both hemispheres 167.7
2376 Male, age 61, both hemispheres 158.8
2805 Female, age 91, both hemispheres 126.4
2808 Female, age 85, both hemispheres 98.2
2380 Male, age 80, both hemispheres 78.1
Nucleus gracilis
nTPM: 97.2
2627 Male, age 74, both hemispheres 125.5
2382 Male, age 80, both hemispheres 83.2
2299 Female, age 85, both hemispheres 82.9
Nucleus raphe magnus
nTPM: 331.5
2172 Female, age 85, both hemispheres 453.4
2160 Male, age 61, both hemispheres 435.7
2455 Male, age 74, both hemispheres 384.8
2051 Male, age 76, both hemispheres 262.6
2328 Male, age 80, both hemispheres 254.3
2459 Female, age 91, both hemispheres 198.4
Nucleus raphe obscurus
nTPM: 142.6
2800 Male, age 61, midline 215.2
2845 Female, age 85, midline 149.7
2142 Male, age 76, midline 62.9
Nucleus raphe pallidus
nTPM: 130.7
2183 Male, age 80, midline 170.6
1924 Male, age 61, midline 122.3
2145 Male, age 76, midline 99.0
Nucleus tractus solitarii
nTPM: 159.5
2656 Male, age 76, both hemispheres 230.4
2307 Male, age 80, both hemispheres 150.1
2191 Female, age 85, both hemispheres 133.2
2144 Female, age 91, right hemisphere 124.2
Paramedian reticular nucleus
nTPM: 226.6
2050 Female, age 85, both hemispheres 289.8
2313 Male, age 61, both hemispheres 251.5
2057 Male, age 80, both hemispheres 240.4
2052 Male, age 76, both hemispheres 124.6
Parvicellular reticular nuclei
nTPM: 246.6
2558 Male, age 74, both hemispheres 368.4
2119 Male, age 80, both hemispheres 192.0
2095 Male, age 76, both hemispheres 179.3
Parvicellular reticular nuclei, medullary
nTPM: 244.9
2189 Female, age 91, both hemispheres 255.6
2181 Male, age 80, left hemisphere 252.7
2091 Female, age 85, both hemispheres 226.5
Pedunculopontine tegmental nucleus
nTPM: 188.0
1921 Female, age 85, both hemispheres 242.2
2334 Male, age 80, both hemispheres 170.9
2338 Male, age 61, both hemispheres 151.0
Peritrigeminal nucleus
nTPM: 202.1
2179 Male, age 61, both hemispheres 224.6
2067 Female, age 85, both hemispheres 212.1
2136 Male, age 76, both hemispheres 169.7
Pontine nuclei
nTPM: 316.4
2787 Female, age 85, both hemispheres 552.2
2727 Male, age 61, right hemisphere 376.6
1968 Male, age 76, left hemisphere 337.1
1863 Male, age 55, unknown 321.6
2109 Female, age 72, unknown 312.1
2454 Male, age 74, left hemisphere 251.9
2115 Male, age 80, left hemisphere 217.2
2319 Female, age 91, both hemispheres 162.4
Pontine raphe nucleus
nTPM: 274.2
2122 Female, age 85, midline 337.5
2853 Male, age 76, midline 210.9
Posteroventral cochlear nucleus
nTPM: 171.5
2752 Female, age 85, both hemispheres 295.1
2371 Male, age 61, both hemispheres 196.8
2070 Male, age 76, both hemispheres 194.5
2135 Female, age 91, both hemispheres 86.7
2341 Male, age 80, both hemispheres 84.6
Prepositus hypoglossal nucleus
nTPM: 181.6
2855 Female, age 85, right hemisphere 192.2
2086 Male, age 80, both hemispheres 170.9
Principal sensory trigeminal nucleus
nTPM: 269.7
2158 Male, age 61, both hemispheres 393.2
2008 Male, age 80, left hemisphere 322.6
2324 Male, age 76, both hemispheres 188.9
2367 Female, age 91, left hemisphere 174.2
Reticular pontine nucleus, caudal
nTPM: 223.3
2332 Male, age 80, right hemisphere 307.6
2092 Male, age 76, both hemispheres 229.5
2559 Male, age 74, both hemispheres 190.4
2457 Female, age 91, both hemispheres 165.6
Reticular pontine nucleus, oral
nTPM: 218.5
2361 Male, age 74, both hemispheres 296.0
2012 Female, age 85, both hemispheres 275.3
2167 Male, age 76, both hemispheres 181.9
1939 Male, age 80, both hemispheres 180.8
2366 Female, age 91, both hemispheres 158.6
Reticulotegmental nucleus
nTPM: 210.6
2325 Male, age 76, both hemispheres 248.9
2452 Male, age 74, both hemispheres 229.5
2333 Male, age 80, both hemispheres 201.2
2322 Female, age 91, both hemispheres 162.8
Spinal trigeminal nucleus, caudal
nTPM: 234.5
2447 Male, age 76, both hemispheres 270.4
2642 Male, age 74, both hemispheres 265.5
2390 Female, age 91, both hemispheres 242.8
2308 Male, age 80, both hemispheres 219.8
2312 Male, age 61, both hemispheres 174.2
Spinal trigeminal nucleus, interpolar
nTPM: 257.9
2066 Male, age 76, right hemisphere 307.2
2625 Male, age 61, both hemispheres 270.7
2386 Female, age 85, both hemispheres 266.6
2389 Female, age 91, both hemispheres 228.4
2033 Male, age 80, both hemispheres 216.8
Spinal trigeminal nucleus, oral
nTPM: 235.2
1978 Male, age 76, both hemispheres 256.4
2737 Female, age 85, both hemispheres 254.3
2164 Male, age 80, both hemispheres 195.0
Spinal vestibular nucleus
nTPM: 220.9
2780 Male, age 80, both hemispheres 257.3
2186 Female, age 91, both hemispheres 247.8
2796 Male, age 61, both hemispheres 234.4
2806 Female, age 85, both hemispheres 209.8
2748 Male, age 76, both hemispheres 201.3
2384 Male, age 74, both hemispheres 175.1
Subcoeruleus area
nTPM: 220.1
2089 Male, age 76, left hemisphere 285.7
1958 Male, age 80, both hemispheres 242.3
2323 Female, age 91, left hemisphere 241.0
2451 Male, age 74, both hemispheres 193.9
2369 Female, age 85, left hemisphere 137.5
Superior olive
nTPM: 264.1
1875 Female, age 85, both hemispheres 356.6
2364 Male, age 74, right hemisphere 264.8
2020 Male, age 76, both hemispheres 242.0
2329 Male, age 80, right hemisphere 241.2
2561 Female, age 91, both hemispheres 215.9
Superior vestibular nucleus
nTPM: 154.7
2015 Male, age 80, both hemispheres 190.0
2061 Male, age 76, both hemispheres 163.0
2383 Male, age 74, both hemispheres 111.1
Ventral medullary reticular nucleus
nTPM: 190.5
2060 Male, age 76, both hemispheres 226.5
2372 Male, age 61, both hemispheres 154.6
Ventral periolivary nuclei
nTPM: 285.4
2130 Female, age 85, both hemispheres 382.8
2165 Male, age 80, both hemispheres 313.1
2794 Female, age 91, left hemisphere 235.2
2023 Male, age 76, both hemispheres 210.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 182.4
2741 Female, age 85, both hemispheres 249.8
1986 Male, age 76, both hemispheres 203.4
2302 Female, age 91, both hemispheres 171.4
2180 Male, age 61, both hemispheres 164.8
2118 Male, age 80, both hemispheres 122.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 231.2
2449 Male, age 74, both hemispheres 356.9
1959 Male, age 76, both hemispheres 253.1
2840 Female, age 85, both hemispheres 222.9
2161 Male, age 80, both hemispheres 217.2
2359 Male, age 61, both hemispheres 171.3
2456 Female, age 91, both hemispheres 165.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 488.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 254.3
FF:10182-103D2 60 years, female 314.7
FF:10165-103B3 76 years, female 194.0
Medulla oblongata
Scaled Tags Per Million: 176.5
FF:10038-101F2 18-64 years, mixed 261.6
FF:10174-103C3 60 years, female 136.5
FF:10155-103A2 76 years, female 131.5
Pons
Scaled Tags Per Million: 488.3
FF:10033-101E6 18-54 years, mixed 488.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 246.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 128.1
Samples: 4

Max nTPM: 175.2
Min nTPM: 72.7
Sample A Female 175.2
Sample B Female 135.1
Sample C Male 129.4
Sample D Male 72.7
Pons
nTPM: 246.8
Samples: 4

Max nTPM: 501.4
Min nTPM: 139.4
Sample A Female 501.4
Sample B Female 139.4
Sample C Male 154.4
Sample D Male 191.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 170.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 170.3
Samples: 4

Max nTPM: 187.3
Min nTPM: 155.2
Sample A Male 187.3
Sample B Male 163.0
Sample C Female 175.7
Sample D Female 155.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 14.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.0
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 13.0
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 12.7
Pons
Expression energy: 14.7
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 14.7
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 12.4

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