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PLEKHB1
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TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:2660.8 nTPM
HPA Brain:1445.5 nTPM
GTEx:2660.8 nTPM
FANTOM5:1672.3 Scaled Tags Per Million
Pig:1512.0 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1445.5
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1227.6
1981 Female, age 72, midline 1401.6
2048 Male, age 55, midline 1315.2
2816 Male, age 47, midline 1274.9
2194 Female, age 79, both hemispheres 1092.0
2565 Male, age 75, midline 1054.3
Cervical spinal cord, dorsal horn
nTPM: 1094.2
2296 Male, age 66, both hemispheres 1712.7
2173 Female, age 72, unknown 1588.9
1877 Male, age 55, unknown 1099.7
2069 Male, age 47, both hemispheres 950.7
2721 Male, age 90, both hemispheres 709.5
2297 Male, age 75, both hemispheres 503.6
Cervical spinal cord, ventral horn
nTPM: 1445.5
2098 Female, age 72, unknown 1730.3
2480 Male, age 75, both hemispheres 1629.9
2809 Male, age 90, both hemispheres 1586.5
2295 Male, age 66, both hemispheres 1427.3
2068 Male, age 55, unknown 1156.0
2820 Female, age 79, both hemispheres 1142.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2660.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 2660.8
Samples: 159

Max nTPM: 5775.9
Min nTPM: 796.7
Std nTPM: 961.0
Median nTPM: 2563.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 5775.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 5705.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 5651.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 4715.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 4587.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 4578.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 4525.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 4449.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 4355.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 4308.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 4290.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 4167.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 4156.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 4054.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 4021.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 3995.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 3958.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 3931.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 3870.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 3820.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 3789.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 3784.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 3707.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 3623.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 3622.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 3552.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 3529.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 3502.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 3499.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 3431.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 3423.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 3370.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 3305.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 3300.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 3266.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 3234.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 3226.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 3201.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 3129.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 3118.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 3101.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 3092.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 3087.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 3073.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 3025.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 3023.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 3018.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 3011.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 3000.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 3000.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 2996.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 2978.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2976.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 2966.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 2938.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2930.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 2929.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 2917.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2914.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2887.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 2886.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 2870.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2866.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2860.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 2849.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2795.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 2777.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2736.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2734.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 2720.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2716.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 2709.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 2680.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 2676.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 2672.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 2644.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 2608.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 2593.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2571.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 2563.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 2560.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 2527.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 2518.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2517.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 2507.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 2502.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2465.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 2446.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 2441.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2433.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 2427.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2424.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2367.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 2363.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 2350.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2339.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 2336.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 2304.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 2291.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 2286.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 2282.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 2274.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 2273.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 2271.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 2263.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 2257.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 2238.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 2225.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2204.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 2178.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 2155.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 2147.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 2124.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 2085.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 2072.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 2070.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 2063.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 2034.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 2029.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 2021.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 2011.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1953.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1938.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1937.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1903.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1886.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1877.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1872.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1865.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1795.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1781.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1778.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1758.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1734.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1702.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1686.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1664.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1616.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1542.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1532.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1512.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1495.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1461.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1457.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1391.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1376.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 1369.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1337.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 1317.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1303.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1290.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1212.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1159.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1122.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1100.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1008.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1007.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 867.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 796.7
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1672.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1672.3
FF:10159-103A6 76 years, female 1983.7
FF:10181-103D1 60 years, female 1361.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1512.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 1217.8
Samples: 4

Max nTPM: 1445.2
Min nTPM: 895.8
Sample A Female 895.8
Sample B Female 1311.6
Sample C Male 1445.2
Sample D Male 1218.5
Ventral spinal cord
nTPM: 1512.1
Samples: 4

Max nTPM: 1812.2
Min nTPM: 1257.5
Sample A Female 1257.5
Sample B Female 1484.4
Sample C Male 1494.1
Sample D Male 1812.2

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