We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FHL1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • FHL1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:170.4 nTPM
HPA Brain:129.9 nTPM
GTEx:170.4 nTPM
FANTOM5:92.8 Scaled Tags Per Million
Pig:68.5 nTPM
Mouse:98.1 nTPM
Allen mouse:5.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001040Antibody HPA001391Antibody CAB020817
Glial cells Not detectedNot detectedLow
Neuronal cells MediumNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 95.8
2290 Female, age 72, unknown 112.4
1857 Female, age 85, left hemisphere 104.5
2481 Female, age 94, left hemisphere 102.7
1781 Male, age 74, unknown 93.6
2846 Female, age 79, unknown 93.2
1854 Male, age 80, left hemisphere 91.0
2289 Male, age 61, right hemisphere 84.8
2288 Male, age 75, left hemisphere 84.6
Globus pallidus, externus
nTPM: 83.8
1996 Male, age 80, right hemisphere 101.1
2772 Female, age 79, unknown 94.3
2646 Male, age 61, right hemisphere 91.7
2395 Male, age 75, both hemispheres 84.9
2567 Female, age 72, unknown 47.1
Globus pallidus, internus
nTPM: 78.6
2483 Female, age 94, right hemisphere 138.3
2037 Male, age 80, right hemisphere 87.9
2287 Male, age 75, right hemisphere 85.3
1818 Male, age 74, unknown 80.2
2778 Female, age 91, both hemispheres 63.0
2566 Female, age 72, unknown 55.4
2111 Female, age 85, right hemisphere 40.3
Nucleus accumbens
nTPM: 115.0
1856 Female, age 91, right hemisphere 154.3
2698 Female, age 72, unknown 125.4
1783 Male, age 74, unknown 117.6
1806 Female, age 85, left hemisphere 117.6
2732 Male, age 80, right hemisphere 115.8
2824 Male, age 61, right hemisphere 114.8
2286 Male, age 75, left hemisphere 93.8
2391 Female, age 94, left hemisphere 80.4
Nucleus basalis of Meynert
nTPM: 94.4
2569 Male, age 61, both hemispheres 107.4
2821 Male, age 75, both hemispheres 99.7
2484 Female, age 94, left hemisphere 89.9
2393 Male, age 80, right hemisphere 80.5
Nucleus of the diagonal band
nTPM: 123.3
1812 Female, age 91, both hemispheres 143.7
2195 Female, age 85, both hemispheres 123.7
1979 Male, age 74, unknown 123.2
2775 Male, age 80, right hemisphere 121.0
2029 Male, age 61, right hemisphere 105.0
Putamen
nTPM: 87.3
1937 Female, age 91, right hemisphere 103.9
2482 Female, age 94, left hemisphere 102.0
1838 Male, age 80, right hemisphere 96.0
2466 Female, age 79, unknown 93.1
1829 Male, age 74, unknown 83.3
2647 Male, age 75, left hemisphere 67.4
2489 Female, age 72, unknown 65.7
Septal nuclei
nTPM: 129.9
2009 Female, age 91, both hemispheres 146.0
2629 Female, age 94, right hemisphere 144.5
2031 Female, age 72, unknown 140.0
1960 Male, age 74, unknown 138.9
2059 Female, age 85, both hemispheres 130.9
2199 Male, age 80, right hemisphere 106.8
2394 Male, age 61, left hemisphere 102.3
Stria terminalis, bed nucleus
nTPM: 126.3
2486 Female, age 94, both hemispheres 134.4
1974 Female, age 91, both hemispheres 122.5
2201 Male, age 74, unknown 122.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 114.8
Samples: 246

Max nTPM: 202.8
Min nTPM: 54.3
Std nTPM: 23.3
Median nTPM: 110.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 202.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 194.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 193.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 174.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 174.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 164.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 163.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 162.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 159.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 158.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 157.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 157.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 156.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 154.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 153.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 152.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 151.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 151.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 149.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 147.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 147.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 146.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 146.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 145.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 144.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 143.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 143.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 143.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 143.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 142.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 142.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 141.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 139.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 139.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 139.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 138.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 138.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 138.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 138.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 138.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 137.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 137.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 137.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 136.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 136.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 135.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 135.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 134.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 133.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 132.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 132.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 132.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 132.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 131.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 130.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 130.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 130.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 130.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 130.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 130.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 129.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 129.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 128.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 128.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 127.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 127.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 127.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 127.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 126.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 126.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 126.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 125.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 125.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 124.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 124.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 124.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 124.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 123.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 123.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 123.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 123.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 123.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 123.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 122.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 122.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 122.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 122.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 122.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 122.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 121.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 121.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 120.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 120.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 120.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 120.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 119.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 119.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 119.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 119.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 118.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 118.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 118.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 117.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 116.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 116.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 116.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 116.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 116.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 115.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 115.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 114.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 114.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 114.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 114.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 114.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 113.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 112.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 112.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 112.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 111.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 110.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 110.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 110.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 110.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 110.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 110.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 110.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 110.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 109.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 109.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 109.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 109.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 109.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 109.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 108.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 108.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 108.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 108.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 108.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 107.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 107.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 107.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 107.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 107.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 107.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 106.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 106.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 106.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 106.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 105.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 105.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 105.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 104.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 104.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 104.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 104.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 104.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 104.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 104.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 103.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 103.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 103.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 103.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 103.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 102.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 102.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 101.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 101.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 101.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 101.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 100.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 100.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 100.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 100.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 100.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 100.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 99.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 99.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 99.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 99.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 98.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 98.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 98.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 97.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 97.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 97.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 96.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 96.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 96.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 96.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 96.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 96.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 95.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 95.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 95.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 95.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 95.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 95.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 95.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 94.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 94.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 93.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 93.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 91.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 91.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 91.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 91.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 90.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 90.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 90.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 89.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 89.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 89.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 87.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 87.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 86.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 86.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 86.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 86.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 85.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 85.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 85.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 84.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 84.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 84.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 83.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 83.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 83.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 82.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 82.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 81.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 79.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 79.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 78.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 77.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 75.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 74.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 70.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 67.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 64.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 170.4
Samples: 246

Max nTPM: 319.2
Min nTPM: 45.8
Std nTPM: 42.9
Median nTPM: 170.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 319.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 292.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 290.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 283.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 280.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 273.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 266.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 261.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 258.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 257.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 256.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 250.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 247.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 246.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 245.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 243.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 243.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 241.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 239.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 235.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 233.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 232.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 226.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 222.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 218.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 217.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 217.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 217.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 217.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 215.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 214.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 213.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 213.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 212.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 212.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 209.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 207.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 207.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 207.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 207.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 206.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 206.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 206.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 205.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 205.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 203.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 202.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 201.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 200.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 200.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 199.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 198.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 198.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 197.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 196.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 196.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 195.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 195.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 195.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 195.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 195.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 194.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 194.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 194.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 193.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 192.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 192.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 191.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 191.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 190.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 189.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 189.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 188.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 188.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 188.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 187.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 187.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 186.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 186.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 186.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 185.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 185.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 184.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 184.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 183.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 183.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 183.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 183.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 182.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 181.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 181.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 181.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 180.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 180.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 179.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 179.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 179.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 178.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 177.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 177.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 176.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 176.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 176.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 176.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 176.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 176.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 175.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 174.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 173.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 173.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 173.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 173.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 173.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 172.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 172.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 172.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 172.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 172.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 171.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 171.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 171.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 171.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 170.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 169.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 169.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 169.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 167.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 167.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 167.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 166.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 166.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 166.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 164.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 163.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 163.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 163.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 163.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 163.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 161.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 161.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 161.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 161.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 160.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 160.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 159.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 159.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 159.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 158.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 158.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 157.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 156.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 156.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 156.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 155.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 155.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 153.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 152.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 152.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 152.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 151.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 151.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 151.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 150.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 150.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 150.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 149.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 148.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 148.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 148.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 148.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 148.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 147.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 147.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 147.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 147.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 146.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 146.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 145.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 145.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 144.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 144.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 143.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 143.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 143.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 142.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 142.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 142.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 140.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 140.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 140.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 139.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 138.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 137.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 137.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 137.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 136.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 136.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 136.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 136.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 135.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 135.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 134.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 134.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 133.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 132.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 132.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 131.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 130.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 130.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 128.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 128.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 128.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 128.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 127.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 127.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 125.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 125.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 125.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 123.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 121.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 121.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 120.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 118.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 117.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 116.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 116.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 116.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 116.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 114.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 114.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 114.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 113.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 111.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 109.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 107.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 103.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 95.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 94.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 92.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 89.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 87.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 84.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 81.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 59.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 52.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 45.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 104.9
Samples: 205

Max nTPM: 184.0
Min nTPM: 52.9
Std nTPM: 24.3
Median nTPM: 100.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 184.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 179.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 174.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 172.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 169.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 164.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 164.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 160.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 156.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 153.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 152.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 152.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 151.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 150.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 145.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 145.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 142.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 138.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 137.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 137.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 135.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 133.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 133.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 133.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 132.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 131.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 130.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 128.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 128.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 128.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 128.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 127.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 125.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 125.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 124.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 124.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 123.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 123.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 123.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 122.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 122.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 122.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 122.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 122.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 122.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 121.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 121.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 121.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 121.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 120.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 119.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 119.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 118.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 118.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 116.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 116.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 115.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 115.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 115.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 115.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 114.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 113.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 113.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 113.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 113.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 112.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 112.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 112.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 112.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 112.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 111.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 111.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 111.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 111.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 111.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 110.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 110.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 110.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 109.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 108.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 107.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 107.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 107.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 106.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 106.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 105.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 105.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 105.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 104.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 104.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 104.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 103.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 103.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 103.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 103.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 103.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 102.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 101.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 101.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 101.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 101.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 101.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 100.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 99.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 99.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 99.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 99.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 98.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 98.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 98.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 98.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 98.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 98.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 98.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 98.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 98.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 97.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 97.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 97.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 96.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 96.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 95.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 95.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 95.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 94.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 94.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 94.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 94.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 94.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 94.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 93.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 93.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 93.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 92.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 92.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 92.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 91.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 91.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 91.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 91.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 91.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 91.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 90.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 90.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 90.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 90.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 90.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 89.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 89.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 89.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 89.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 89.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 86.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 86.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 86.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 86.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 85.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 85.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 85.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 85.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 84.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 84.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 84.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 84.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 84.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 83.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 82.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 82.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 82.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 82.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 82.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 81.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 81.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 81.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 80.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 80.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 80.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 80.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 79.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 78.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 78.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 77.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 77.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 76.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 76.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 76.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 76.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 75.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 74.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 74.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 74.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 71.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 67.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 66.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 65.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 57.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 55.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 54.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 52.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

92.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 90.2
FF:10164-103B2 76 years, female 90.2
Nucleus accumbens
Scaled Tags Per Million: 69.2
FF:10037-101F1 23-56 years, mixed 69.2
Putamen
Scaled Tags Per Million: 92.8
FF:10176-103C5 60 years, female 92.8
Globus pallidus
Scaled Tags Per Million: 42.1
FF:10175-103C4 60 years, female 51.0
FF:10161-103A8 76 years, female 33.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.5
Pig sample Sample description nTPM
Caudate
nTPM: 68.5
Samples: 4

Max nTPM: 74.6
Min nTPM: 61.4
Sample A Female 65.3
Sample B Female 72.7
Sample C Male 74.6
Sample D Male 61.4
Putamen
nTPM: 55.2
Samples: 4

Max nTPM: 65.4
Min nTPM: 44.6
Sample A Female 44.6
Sample B Female 54.0
Sample C Male 65.4
Sample D Male 56.6
Septum
nTPM: 65.7
Samples: 4

Max nTPM: 77.6
Min nTPM: 57.7
Sample A Female 69.2
Sample B Female 57.7
Sample C Male 77.6
Sample D Male 58.2
Ventral pallidum
nTPM: 60.4
Samples: 4

Max nTPM: 67.0
Min nTPM: 55.6
Sample A Female 59.9
Sample B Female 59.2
Sample C Male 67.0
Sample D Male 55.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 58.2
Samples: 4

Max nTPM: 59.0
Min nTPM: 57.1
Sample A Male 57.1
Sample B Male 58.3
Sample C Female 59.0
Sample D Female 58.5
Septum
nTPM: 98.1
Samples: 4

Max nTPM: 107.9
Min nTPM: 90.0
Sample A Male 90.0
Sample B Male 101.0
Sample C Female 93.5
Sample D Female 107.9
Ventral forebrain
nTPM: 67.2
Samples: 4

Max nTPM: 71.9
Min nTPM: 64.3
Sample A Male 65.7
Sample B Male 71.9
Sample C Female 67.0
Sample D Female 64.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.7
2219 Antisense, RP_040604_01_A03, Mouse strain C57BL/6J (56 days, male) 3.7
2218 Antisense, RP_040604_01_A03, Mouse strain C57BL/6J (56 days, male) 1.7
Pallidum
Expression energy: 5.1
2219 Antisense, RP_040604_01_A03, Mouse strain C57BL/6J (56 days, male) 5.1
2218 Antisense, RP_040604_01_A03, Mouse strain C57BL/6J (56 days, male) 2.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org