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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:500.0 nTPM
FANTOM5:425.4 Scaled Tags Per Million
Pig:191.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001762Antibody CAB000080Antibody CAB058687
Glial cells MediumMediumMedium
Neuronal cells LowNot detectedLow







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

500.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 500.0
Samples: 246

Max nTPM: 4641.1
Min nTPM: 83.9
Std nTPM: 370.5
Median nTPM: 420.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4641.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1693.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1681.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1636.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1407.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1361.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1343.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1228.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1140.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1123.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1086.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1032.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1015.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 907.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 869.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 849.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 847.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 837.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 835.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 832.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 829.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 823.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 816.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 810.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 800.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 789.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 776.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 773.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 769.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 766.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 761.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 755.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 745.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 718.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 705.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 699.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 698.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 684.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 674.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 671.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 664.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 659.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 656.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 637.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 634.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 634.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 632.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 625.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 623.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 620.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 620.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 617.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 613.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 611.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 611.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 609.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 608.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 607.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 599.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 599.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 598.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 595.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 576.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 573.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 572.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 567.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 566.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 565.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 564.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 563.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 560.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 559.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 558.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 555.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 554.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 553.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 541.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 538.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 529.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 528.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 527.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 526.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 524.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 521.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 518.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 518.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 515.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 514.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 511.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 508.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 507.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 498.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 496.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 493.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 493.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 487.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 483.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 483.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 480.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 480.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 477.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 469.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 469.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 467.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 461.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 456.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 454.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 451.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 450.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 447.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 442.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 442.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 441.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 439.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 434.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 434.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 434.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 432.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 430.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 429.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 428.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 426.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 420.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 420.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 415.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 412.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 412.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 410.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 410.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 402.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 401.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 400.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 395.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 394.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 393.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 390.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 388.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 388.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 388.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 388.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 387.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 384.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 383.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 382.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 381.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 377.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 375.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 371.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 369.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 369.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 367.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 367.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 366.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 364.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 363.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 362.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 361.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 360.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 352.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 350.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 350.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 349.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 348.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 346.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 345.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 343.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 343.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 343.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 342.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 341.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 339.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 337.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 331.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 328.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 328.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 325.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 324.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 323.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 323.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 319.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 319.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 318.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 315.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 314.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 311.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 309.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 309.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 306.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 304.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 303.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 303.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 302.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 296.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 293.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 293.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 293.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 292.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 291.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 288.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 288.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 286.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 283.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 282.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 277.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 275.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 272.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 271.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 271.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 269.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 269.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 269.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 267.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 264.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 262.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 261.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 257.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 256.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 255.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 254.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 245.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 245.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 238.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 238.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 231.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 226.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 226.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 226.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 224.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 224.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 218.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 215.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 214.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 214.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 214.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 205.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 204.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 204.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 195.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 189.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 189.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 184.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 170.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 167.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 108.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 101.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 83.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

425.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 425.4
FF:10164-103B2 76 years, female 425.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.2
Pig sample Sample description nTPM
Caudate
nTPM: 191.2
Samples: 4

Max nTPM: 235.3
Min nTPM: 141.1
Sample A Female 168.7
Sample B Female 219.7
Sample C Male 235.3
Sample D Male 141.1

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