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HOMER3
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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

248.111
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:34.8 nTPM
HPA Brain:43.1 nTPM
GTEx:34.8 nTPM
Pig:58.7 nTPM
Mouse:3.6 nTPM
Allen mouse:2.9 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB079015
Hypothalamus mean intensity 248.111
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 79.054
Mammillary nucleus 53.239
Periventricular hypothalamic nucleus 205.824
Supraoptic nucleus 82.273
Tuberal nucleus 80.883
Ventral tuberomammillary nucleus 31.718
Lateral preoptic area 18.603
Medial preoptic area 54.866
Suprachiasmatic nucleus 174.261
Paraventricular hypothalamic nucleus 75.608
Anterior hypothalamic area, central 110.770
Ventral medial hypothalamic nucleus 64.776
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 172.394
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 38.314
Dorsal medial hypothalamic nucleus 125.799
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 15.8
1961 Female, age 42, unknown 16.1
2226 Male, age 75, left hemisphere 15.5
Dorsomedial nucleus
nTPM: 26.6
2017 Female, age 42, unknown 32.6
1989 Male, age 62, unknown 25.8
2041 Female, age 72, unknown 21.4
Lateral hypothalamic area
nTPM: 27.4
2228 Male, age 66, unknown 28.9
2271 Male, age 75, both hemispheres 28.5
1791 Male, age 80, right hemisphere 28.2
2412 Male, age 62, unknown 24.0
Mammillary body
nTPM: 40.3
1834 Female, age 42, unknown 54.5
1948 Female, age 72, unknown 40.7
1945 Male, age 80, right hemisphere 40.3
2413 Male, age 66, unknown 37.2
1923 Female, age 72, unknown 28.6
Paraventricular nucleus
nTPM: 31.6
2700 Male, age 62, unknown 31.6
Preoptic area
nTPM: 27.6
1861 Female, age 42, unknown 33.2
2414 Female, age 72, unknown 33.0
1907 Male, age 80, right hemisphere 16.5
Supraoptic nucleus
nTPM: 43.1
2043 Male, age 62, unknown 54.9
1894 Female, age 72, unknown 43.4
2835 Female, age 72, unknown 31.1
Ventromedial nucleus
nTPM: 19.3
1822 Female, age 42, unknown 19.8
1982 Female, age 72, unknown 18.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 34.8
Samples: 202

Max nTPM: 474.9
Min nTPM: 8.9
Std nTPM: 35.0
Median nTPM: 28.7
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 474.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 120.1
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 104.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 79.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 75.8
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 72.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 68.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 68.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 65.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 62.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 62.0
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 60.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 59.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 57.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 57.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 56.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 56.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 54.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 53.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 53.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 52.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 52.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 52.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 52.5
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 52.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 52.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 52.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 52.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 51.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 51.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 50.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 50.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 50.2
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 48.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 48.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 48.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 46.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 46.4
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 44.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 44.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 43.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 43.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 43.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 43.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 43.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 43.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 43.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 42.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 42.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 42.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 41.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 41.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 41.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 40.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 40.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 40.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 39.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 39.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 38.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 38.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 38.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 37.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 36.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 36.9
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 36.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 36.6
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 36.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 35.7
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 35.5
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 35.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 34.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 33.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 33.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 33.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 33.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 33.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 32.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 32.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 32.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 31.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 31.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 31.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 31.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 31.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 30.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 30.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 29.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 29.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 29.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 29.7
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 29.6
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 29.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 29.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 29.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 29.4
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 29.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 28.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 28.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 28.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 28.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 28.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 28.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 28.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 28.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 28.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 27.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 27.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 27.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 27.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 27.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 27.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 26.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 26.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 26.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 26.8
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 26.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 26.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 26.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 25.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 25.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 25.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 25.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 25.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 25.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 24.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 24.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 24.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 24.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 24.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 24.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 24.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 23.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 23.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 23.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 23.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 23.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 23.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 23.3
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 23.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 23.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 23.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 23.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 23.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 22.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 22.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 22.5
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 22.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 22.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 22.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 22.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 22.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 21.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 21.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 21.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 21.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 21.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 21.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 21.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 21.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 20.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 19.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 19.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 19.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 19.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 19.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 19.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 18.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 18.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 18.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 18.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 18.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 18.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 17.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 17.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 16.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 16.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 16.5
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 16.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 16.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 16.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 15.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 15.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 15.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 15.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 15.2
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 14.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 14.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 13.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 13.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 13.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 13.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 11.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 11.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 10.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 9.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 9.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 9.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 8.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 58.7
Samples: 4

Max nTPM: 70.0
Min nTPM: 42.3
Sample A Female 70.0
Sample B Female 62.6
Sample C Male 59.9
Sample D Male 42.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 3.6
Samples: 4

Max nTPM: 4.9
Min nTPM: 2.2
Sample A Male 4.9
Sample B Male 4.5
Sample C Female 2.2
Sample D Female 2.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.9
356087 Antisense, RP_040617_02_C03, Mouse strain C57BL/6J (56 days, male) 4.6
71608386 Antisense, RP_050927_01_F03, Mouse strain C57BL/6J (56 days, male) 1.1

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