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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:31.6 nTPM
HPA Brain:60.5 nTPM
GTEx:31.6 nTPM
FANTOM5:162.0 Scaled Tags Per Million
Pig:65.0 nTPM
Mouse:134.6 nTPM
Allen mouse:2.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA056127
Glial cells Not detected
Neuronal cells Low


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 40.0
1781 Male, age 74, unknown 52.2
2288 Male, age 75, left hemisphere 44.8
2481 Female, age 94, left hemisphere 41.1
2290 Female, age 72, unknown 40.9
1857 Female, age 85, left hemisphere 38.9
2846 Female, age 79, unknown 38.0
2289 Male, age 61, right hemisphere 37.5
1854 Male, age 80, left hemisphere 27.2
Globus pallidus, externus
nTPM: 25.6
2395 Male, age 75, both hemispheres 36.6
2646 Male, age 61, right hemisphere 26.0
2772 Female, age 79, unknown 25.6
1996 Male, age 80, right hemisphere 24.7
2567 Female, age 72, unknown 15.2
Globus pallidus, internus
nTPM: 31.6
2111 Female, age 85, right hemisphere 46.9
2778 Female, age 91, both hemispheres 43.4
2483 Female, age 94, right hemisphere 34.8
2287 Male, age 75, right hemisphere 30.2
2037 Male, age 80, right hemisphere 23.5
1818 Male, age 74, unknown 23.2
2566 Female, age 72, unknown 19.1
Nucleus accumbens
nTPM: 39.5
2824 Male, age 61, right hemisphere 50.9
1806 Female, age 85, left hemisphere 42.3
2286 Male, age 75, left hemisphere 41.4
1783 Male, age 74, unknown 40.1
1856 Female, age 91, right hemisphere 38.9
2391 Female, age 94, left hemisphere 36.2
2698 Female, age 72, unknown 35.4
2732 Male, age 80, right hemisphere 30.9
Nucleus basalis of Meynert
nTPM: 34.8
2821 Male, age 75, both hemispheres 37.6
2393 Male, age 80, right hemisphere 37.4
2484 Female, age 94, left hemisphere 36.6
2569 Male, age 61, both hemispheres 27.6
Nucleus of the diagonal band
nTPM: 60.5
1812 Female, age 91, both hemispheres 74.4
2195 Female, age 85, both hemispheres 66.9
2029 Male, age 61, right hemisphere 64.1
2775 Male, age 80, right hemisphere 61.7
1979 Male, age 74, unknown 35.4
Putamen
nTPM: 38.2
1829 Male, age 74, unknown 44.7
2466 Female, age 79, unknown 41.9
2647 Male, age 75, left hemisphere 41.2
2482 Female, age 94, left hemisphere 37.7
2489 Female, age 72, unknown 36.3
1937 Female, age 91, right hemisphere 34.2
1838 Male, age 80, right hemisphere 31.7
Septal nuclei
nTPM: 59.2
1960 Male, age 74, unknown 77.1
2394 Male, age 61, left hemisphere 69.6
2031 Female, age 72, unknown 68.1
2629 Female, age 94, right hemisphere 56.7
2009 Female, age 91, both hemispheres 53.7
2059 Female, age 85, both hemispheres 52.7
2199 Male, age 80, right hemisphere 36.3
Stria terminalis, bed nucleus
nTPM: 53.2
1974 Female, age 91, both hemispheres 54.9
2486 Female, age 94, both hemispheres 54.5
2201 Male, age 74, unknown 50.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 28.6
Samples: 246

Max nTPM: 88.9
Min nTPM: 13.0
Std nTPM: 9.5
Median nTPM: 27.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 88.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 64.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 61.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 60.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 58.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 56.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 51.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 49.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 49.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 48.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 45.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 45.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 45.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 45.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 44.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 43.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 43.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 42.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 42.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 40.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 39.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 38.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 38.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 38.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 38.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 37.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 37.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 37.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 37.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 37.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 37.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 36.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 36.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 36.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 36.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 36.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 35.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 35.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 35.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 35.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 34.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 34.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 33.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 33.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 33.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 33.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 33.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 33.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 33.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 33.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 33.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 32.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 32.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 32.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 32.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 31.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 31.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 31.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 31.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 31.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 31.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 31.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 31.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 31.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 31.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 31.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 31.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 30.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 30.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 30.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 30.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 30.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 30.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 30.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 30.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 30.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 30.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 29.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 29.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 29.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 29.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 29.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 29.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 29.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 29.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 29.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 29.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 29.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 29.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 29.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 29.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 28.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 28.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 28.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 28.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 28.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 28.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 28.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 28.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 28.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 28.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 28.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 28.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 27.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 27.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 27.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 27.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 27.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 27.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 27.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 27.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 27.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 27.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 27.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 26.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 26.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 26.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 26.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 26.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 26.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 25.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 25.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 25.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 25.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 25.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 25.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 25.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 25.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 25.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 25.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 25.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 25.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 25.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 25.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 25.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 24.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 24.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 24.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 24.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 24.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 24.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 24.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 24.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 24.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 24.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 24.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 24.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 24.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 24.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 24.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 24.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 23.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 23.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 23.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 23.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 23.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 23.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 23.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 23.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 23.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 22.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 22.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 22.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 22.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 22.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 22.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 22.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 22.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 22.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 22.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 22.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 22.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 22.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 22.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 22.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 22.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 21.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 21.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 21.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 21.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 21.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 21.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 21.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 21.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 21.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 21.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 21.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 21.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 21.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 20.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 20.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 20.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 20.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 19.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 19.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 19.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 19.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 19.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 19.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 19.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 19.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 19.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 19.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 19.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 19.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 18.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 18.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 18.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 18.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 18.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 18.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 18.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 17.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 17.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 17.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 17.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 17.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 16.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 16.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 16.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 16.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 15.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 15.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 14.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 13.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 13.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 30.3
Samples: 246

Max nTPM: 160.3
Min nTPM: 12.4
Std nTPM: 12.7
Median nTPM: 28.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 160.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 72.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 71.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 66.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 65.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 54.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 53.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 53.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 49.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 49.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 47.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 45.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 45.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 45.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 45.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 44.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 44.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 44.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 43.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 43.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 42.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 42.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 42.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 42.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 41.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 41.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 41.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 40.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 39.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 39.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 39.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 39.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 39.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 39.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 39.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 38.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 38.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 38.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 38.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 38.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 37.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 37.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 37.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 37.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 37.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 37.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 36.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 36.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 36.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 36.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 36.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 36.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 35.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 35.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 35.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 35.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 35.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 35.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 35.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 35.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 34.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 34.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 34.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 34.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 34.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 34.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 34.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 33.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 33.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 33.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 33.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 33.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 33.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 33.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 33.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 33.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 33.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 33.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 33.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 32.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 32.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 32.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 32.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 32.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 32.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 32.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 32.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 31.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 31.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 31.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 31.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 31.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 31.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 31.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 31.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 31.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 31.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 31.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 31.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 31.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 30.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 30.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 30.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 30.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 30.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 30.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 30.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 30.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 30.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 29.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 29.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 29.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 29.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 28.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 28.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 28.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 28.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 28.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 28.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 28.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 28.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 28.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 28.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 28.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 28.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 28.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 28.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 28.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 28.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 27.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 27.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 27.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 27.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 27.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 27.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 27.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 27.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 26.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 26.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 26.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 26.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 26.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 26.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 26.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 26.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 26.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 26.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 26.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 26.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 26.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 25.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 25.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 25.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 25.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 25.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 25.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 25.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 25.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 24.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 24.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 24.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 24.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 24.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 24.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 24.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 24.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 24.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 24.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 24.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 24.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 23.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 23.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 23.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 23.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 23.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 23.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 23.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 23.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 23.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 22.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 22.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 22.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 22.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 22.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 22.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 22.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 22.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 22.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 22.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 22.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 22.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 22.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 21.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 21.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 21.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 21.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 21.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 21.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 21.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 21.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 21.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 21.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 20.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 20.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 20.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 20.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 20.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 20.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 20.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 20.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 20.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 20.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 19.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 19.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 19.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 19.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 19.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 18.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 18.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 18.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 18.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 18.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 18.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 18.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 18.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 17.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 17.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 17.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 17.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 16.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 16.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 16.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 15.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 15.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 15.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 15.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 15.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 14.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 14.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 14.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.4
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Brain - Putamen (basal ganglia)
Average nTPM: 31.6
Samples: 205

Max nTPM: 142.9
Min nTPM: 13.8
Std nTPM: 13.6
Median nTPM: 28.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 142.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 98.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 84.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 74.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 69.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 66.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 61.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 52.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 50.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 50.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 50.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 48.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 47.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 47.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 45.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 45.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 44.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 44.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 44.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 41.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 40.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 39.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 39.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 38.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 38.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 38.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 38.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 37.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 36.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 36.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 36.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 36.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 35.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 35.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 35.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 34.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 34.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 34.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 34.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 34.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 34.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 33.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 33.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 33.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 33.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 33.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 33.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 33.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 33.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 33.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 33.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 33.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 33.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 33.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 33.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 32.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 32.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 32.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 32.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 32.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 32.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 32.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 31.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 31.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 31.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 31.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 31.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 31.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 31.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 31.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 30.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 30.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 30.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 30.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 30.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 30.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 30.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 30.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 30.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 29.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 29.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 29.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 29.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 29.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 29.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 29.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 29.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 28.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 28.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 28.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 28.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 28.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 28.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 28.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 28.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 28.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 28.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 28.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 28.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 27.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 27.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 27.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 27.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 27.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 27.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 27.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 27.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 27.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 27.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 27.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 26.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 26.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 26.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 26.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 26.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 26.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 26.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 26.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 26.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 26.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 25.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 25.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 25.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 25.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 25.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 25.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 25.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 25.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 25.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 25.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 25.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 25.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 25.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 25.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 24.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 24.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 24.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 24.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 24.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 24.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 24.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 24.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 24.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 24.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 23.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 23.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 23.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 23.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 22.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 22.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 22.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 22.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 22.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 21.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 21.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 21.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 21.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 21.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 21.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 21.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 21.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 20.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 20.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 20.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 20.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 20.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 20.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 20.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 19.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 19.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 19.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 19.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 18.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 18.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 17.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 17.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 16.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 16.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 15.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 14.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 14.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 13.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

162.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 49.6
FF:10164-103B2 76 years, female 49.6
Nucleus accumbens
Scaled Tags Per Million: 162.0
FF:10037-101F1 23-56 years, mixed 162.0
Putamen
Scaled Tags Per Million: 80.0
FF:10176-103C5 60 years, female 80.0
Globus pallidus
Scaled Tags Per Million: 62.0
FF:10175-103C4 60 years, female 78.4
FF:10161-103A8 76 years, female 45.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.0
Pig sample Sample description nTPM
Caudate
nTPM: 39.9
Samples: 4

Max nTPM: 41.4
Min nTPM: 38.1
Sample A Female 41.4
Sample B Female 39.7
Sample C Male 40.3
Sample D Male 38.1
Putamen
nTPM: 42.4
Samples: 4

Max nTPM: 45.9
Min nTPM: 33.6
Sample A Female 45.9
Sample B Female 33.6
Sample C Male 44.6
Sample D Male 45.5
Septum
nTPM: 65.0
Samples: 4

Max nTPM: 98.4
Min nTPM: 47.0
Sample A Female 47.0
Sample B Female 52.7
Sample C Male 98.4
Sample D Male 61.8
Ventral pallidum
nTPM: 52.5
Samples: 4

Max nTPM: 69.1
Min nTPM: 37.1
Sample A Female 37.1
Sample B Female 50.4
Sample C Male 69.1
Sample D Male 53.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 122.3
Samples: 4

Max nTPM: 132.7
Min nTPM: 111.2
Sample A Male 119.1
Sample B Male 111.2
Sample C Female 126.3
Sample D Female 132.7
Septum
nTPM: 134.6
Samples: 4

Max nTPM: 153.9
Min nTPM: 123.8
Sample A Male 123.8
Sample B Male 129.6
Sample C Female 153.9
Sample D Female 131.0
Ventral forebrain
nTPM: 116.9
Samples: 4

Max nTPM: 129.0
Min nTPM: 107.7
Sample A Male 109.5
Sample B Male 107.7
Sample C Female 129.0
Sample D Female 121.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.0
70439123 Antisense, RP_050614_03_C01, Mouse strain C57BL/6J (56 days, male) 2.8
74750020 Antisense, RP_060220_05_E10, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 1.7
70439123 Antisense, RP_050614_03_C01, Mouse strain C57BL/6J (56 days, male) 2.0
74750020 Antisense, RP_060220_05_E10, Mouse strain C57BL/6J (56 days, male) 1.3

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