PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:172.7 nTPM
FANTOM5:284.5 Scaled Tags Per Million
Pig:141.6 nTPM
Mouse:198.4 nTPM
Allen mouse:4.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 172.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 126.6
2188 Female, age 91, both hemispheres 163.5
2301 Female, age 85, both hemispheres 155.9
2090 Male, age 80, both hemispheres 110.9
1984 Male, age 76, both hemispheres 76.1
Area postrema
nTPM: 82.2
2306 Male, age 80, both hemispheres 113.6
2054 Male, age 76, both hemispheres 79.9
2799 Male, age 61, both hemispheres 53.3
Dorsal cochlear nucleus
nTPM: 102.8
2187 Female, age 91, both hemispheres 126.2
2802 Male, age 74, right hemisphere 121.9
2378 Male, age 80, both hemispheres 111.5
2058 Male, age 76, both hemispheres 86.5
2370 Male, age 61, both hemispheres 67.7
Dorsal medullary reticular nucleus
nTPM: 104.9
2040 Female, age 85, both hemispheres 135.3
2373 Male, age 61, both hemispheres 91.6
2088 Male, age 76, both hemispheres 87.7
Dorsal motor vagal complex
nTPM: 90.1
2133 Female, age 91, both hemispheres 107.0
2185 Male, age 76, both hemispheres 97.2
2000 Male, age 74, unknown 94.2
2797 Male, age 61, both hemispheres 91.9
2807 Female, age 85, both hemispheres 91.4
2844 Male, age 55, unknown 90.4
2643 Male, age 74, both hemispheres 76.2
2813 Female, age 72, unknown 72.6
Dorsal tegmental nucleus
nTPM: 78.7
2326 Male, age 74, both hemispheres 113.3
1936 Male, age 76, left hemisphere 79.3
2083 Male, age 80, both hemispheres 71.1
2358 Male, age 61, both hemispheres 51.2
Dorsolateral tegmental area
nTPM: 71.8
2751 Female, age 85, both hemispheres 106.9
2360 Male, age 74, both hemispheres 84.5
2654 Male, age 80, both hemispheres 69.9
2141 Male, age 76, both hemispheres 68.9
2337 Male, age 61, both hemispheres 29.0
Gigantocellular reticular nuclei, medullary
nTPM: 131.7
2387 Female, age 91, both hemispheres 219.4
2462 Male, age 74, both hemispheres 169.9
2310 Male, age 80, both hemispheres 123.0
2314 Male, age 61, both hemispheres 119.9
2022 Male, age 76, right hemisphere 79.1
1876 Female, age 85, both hemispheres 78.8
Gigantocellular reticular nuclei, pars
nTPM: 100.9
2330 Male, age 80, both hemispheres 128.5
2706 Male, age 80, both hemispheres 128.1
2168 Male, age 76, both hemispheres 102.1
2084 Female, age 85, both hemispheres 74.5
2336 Male, age 61, both hemispheres 71.4
Inferior olive
nTPM: 125.7
2563 Male, age 74, both hemispheres 164.2
2085 Female, age 85, both hemispheres 148.0
2379 Male, age 80, both hemispheres 127.2
2628 Female, age 91, both hemispheres 103.0
2178 Male, age 61, both hemispheres 86.3
Kolliker-Fuse nucleus
nTPM: 89.5
2793 Female, age 91, left hemisphere 127.3
2315 Male, age 76, right hemisphere 72.1
2163 Male, age 80, both hemispheres 69.2
Lateral lemniscal nuclei
nTPM: 122.5
2453 Male, age 74, right hemisphere 152.3
2036 Male, age 80, both hemispheres 145.6
2320 Female, age 91, left hemisphere 139.8
2169 Male, age 76, both hemispheres 112.5
2746 Female, age 85, left hemisphere 62.3
Lateral medullary reticular nucleus
nTPM: 105.0
2190 Female, age 85, both hemispheres 147.9
2804 Female, age 91, both hemispheres 124.4
2305 Male, age 74, both hemispheres 114.3
2044 Male, age 76, both hemispheres 89.2
2852 Male, age 80, both hemispheres 86.6
2374 Male, age 61, both hemispheres 67.7
Lateral parabrachial nucleus
nTPM: 89.7
2790 Male, age 61, both hemispheres 116.9
2792 Male, age 76, both hemispheres 100.5
2013 Male, age 80, both hemispheres 78.3
2139 Female, age 85, right hemisphere 63.1
Lateral vestibular nucleus
nTPM: 97.3
2311 Male, age 80, both hemispheres 125.1
2184 Male, age 76, both hemispheres 69.5
Locus coeruleus
nTPM: 120.3
2014 Male, age 55, unknown 149.7
2720 Male, age 74, both hemispheres 131.9
2123 Female, age 91, both hemispheres 129.5
2317 Female, age 72, unknown 119.9
1980 Male, age 76, both hemispheres 104.4
2162 Male, age 80, both hemispheres 103.9
2788 Male, age 74, unknown 102.8
Medial olivary nucleus
nTPM: 81.3
1962 Male, age 76, both hemispheres 106.8
2138 Female, age 91, both hemispheres 93.9
2851 Male, age 80, both hemispheres 85.8
1943 Male, age 61, both hemispheres 38.6
Medial parabrachial nucleus
nTPM: 88.0
2170 Female, age 91, both hemispheres 121.4
2854 Male, age 80, both hemispheres 86.9
2463 Female, age 85, right hemisphere 84.8
2156 Male, age 61, both hemispheres 75.0
2786 Male, age 76, both hemispheres 72.2
Medial periolivary nuclei
nTPM: 120.2
2791 Male, age 74, right hemisphere 209.6
2458 Female, age 91, both hemispheres 124.6
2063 Male, age 76, both hemispheres 105.6
2171 Female, age 85, both hemispheres 105.0
2081 Male, age 80, both hemispheres 56.2
Medial vestibular nucleus
nTPM: 117.2
2801 Male, age 74, both hemispheres 213.1
2743 Female, age 85, both hemispheres 109.7
2093 Male, age 80, both hemispheres 105.4
2803 Female, age 91, both hemispheres 102.2
2624 Male, age 61, both hemispheres 90.1
2134 Male, age 76, both hemispheres 83.1
Motor facial nucleus
nTPM: 137.5
2365 Male, age 74, right hemisphere 204.5
2795 Female, age 91, both hemispheres 195.1
2327 Male, age 80, both hemispheres 135.8
2062 Male, age 76, both hemispheres 103.3
2126 Male, age 61, both hemispheres 99.8
2697 Female, age 85, both hemispheres 86.5
Motor hypoglossal nucleus
nTPM: 116.7
2125 Female, age 91, both hemispheres 142.2
2132 Female, age 85, both hemispheres 126.0
2182 Male, age 80, both hemispheres 124.5
2461 Male, age 61, both hemispheres 108.0
2277 Male, age 76, both hemispheres 83.0
Motor trigeminal nucleus
nTPM: 101.9
2560 Male, age 74, both hemispheres 161.1
2079 Male, age 80, both hemispheres 112.2
2321 Female, age 91, both hemispheres 108.0
2309 Male, age 76, both hemispheres 65.0
2335 Male, age 61, both hemispheres 63.2
Nuclei of the trapezoid body
nTPM: 143.0
2368 Female, age 91, both hemispheres 194.5
2159 Male, age 61, both hemispheres 157.4
2735 Female, age 85, both hemispheres 156.1
1983 Male, age 76, both hemispheres 110.2
2166 Male, age 80, both hemispheres 96.6
Nucleus ambiguus
nTPM: 84.2
2071 Male, age 76, both hemispheres 109.9
2096 Female, age 85, both hemispheres 58.5
Nucleus cuneatus
nTPM: 112.1
2808 Female, age 85, both hemispheres 159.5
2380 Male, age 80, both hemispheres 143.2
2564 Male, age 74, both hemispheres 133.3
2381 Male, age 80, both hemispheres 119.4
2376 Male, age 61, both hemispheres 111.9
2562 Male, age 61, both hemispheres 105.5
2805 Female, age 91, both hemispheres 82.1
2131 Male, age 76, both hemispheres 77.5
2100 Male, age 76, both hemispheres 76.2
Nucleus gracilis
nTPM: 139.0
2627 Male, age 74, both hemispheres 162.9
2382 Male, age 80, both hemispheres 135.7
2299 Female, age 85, both hemispheres 118.5
Nucleus raphe magnus
nTPM: 134.5
2160 Male, age 61, both hemispheres 200.2
2455 Male, age 74, both hemispheres 186.0
2459 Female, age 91, both hemispheres 135.2
2328 Male, age 80, both hemispheres 122.6
2172 Female, age 85, both hemispheres 111.7
2051 Male, age 76, both hemispheres 51.6
Nucleus raphe obscurus
nTPM: 145.0
2845 Female, age 85, midline 211.1
2800 Male, age 61, midline 116.5
2142 Male, age 76, midline 107.4
Nucleus raphe pallidus
nTPM: 98.7
2183 Male, age 80, midline 113.7
2145 Male, age 76, midline 110.4
1924 Male, age 61, midline 72.0
Nucleus tractus solitarii
nTPM: 86.8
2144 Female, age 91, right hemisphere 100.9
2656 Male, age 76, both hemispheres 100.8
2307 Male, age 80, both hemispheres 80.6
2191 Female, age 85, both hemispheres 65.1
Paramedian reticular nucleus
nTPM: 117.0
2313 Male, age 61, both hemispheres 128.1
2057 Male, age 80, both hemispheres 121.7
2052 Male, age 76, both hemispheres 111.4
2050 Female, age 85, both hemispheres 107.0
Parvicellular reticular nuclei
nTPM: 94.9
2558 Male, age 74, both hemispheres 119.8
2119 Male, age 80, both hemispheres 84.9
2095 Male, age 76, both hemispheres 80.1
Parvicellular reticular nuclei, medullary
nTPM: 82.0
2091 Female, age 85, both hemispheres 86.6
2189 Female, age 91, both hemispheres 82.6
2181 Male, age 80, left hemisphere 76.9
Pedunculopontine tegmental nucleus
nTPM: 78.6
2334 Male, age 80, both hemispheres 92.9
1921 Female, age 85, both hemispheres 87.7
2338 Male, age 61, both hemispheres 55.3
Peritrigeminal nucleus
nTPM: 114.0
2067 Female, age 85, both hemispheres 126.9
2179 Male, age 61, both hemispheres 124.7
2136 Male, age 76, both hemispheres 90.3
Pontine nuclei
nTPM: 107.3
2727 Male, age 61, right hemisphere 191.9
2454 Male, age 74, left hemisphere 121.9
2319 Female, age 91, both hemispheres 117.0
1863 Male, age 55, unknown 113.9
2787 Female, age 85, both hemispheres 100.5
1968 Male, age 76, left hemisphere 87.8
2109 Female, age 72, unknown 85.5
2115 Male, age 80, left hemisphere 39.7
Pontine raphe nucleus
nTPM: 108.0
2122 Female, age 85, midline 130.1
2853 Male, age 76, midline 86.0
Posteroventral cochlear nucleus
nTPM: 109.9
2341 Male, age 80, both hemispheres 164.8
2135 Female, age 91, both hemispheres 120.1
2070 Male, age 76, both hemispheres 92.8
2752 Female, age 85, both hemispheres 88.2
2371 Male, age 61, both hemispheres 83.7
Prepositus hypoglossal nucleus
nTPM: 172.7
2855 Female, age 85, right hemisphere 250.1
2086 Male, age 80, both hemispheres 95.3
Principal sensory trigeminal nucleus
nTPM: 121.4
2158 Male, age 61, both hemispheres 179.8
2008 Male, age 80, left hemisphere 133.8
2367 Female, age 91, left hemisphere 96.2
2324 Male, age 76, both hemispheres 75.6
Reticular pontine nucleus, caudal
nTPM: 122.5
2457 Female, age 91, both hemispheres 183.0
2332 Male, age 80, right hemisphere 131.8
2092 Male, age 76, both hemispheres 97.8
2559 Male, age 74, both hemispheres 77.2
Reticular pontine nucleus, oral
nTPM: 105.4
2366 Female, age 91, both hemispheres 146.2
2361 Male, age 74, both hemispheres 140.4
2012 Female, age 85, both hemispheres 100.3
2167 Male, age 76, both hemispheres 70.8
1939 Male, age 80, both hemispheres 69.6
Reticulotegmental nucleus
nTPM: 96.9
2322 Female, age 91, both hemispheres 136.0
2452 Male, age 74, both hemispheres 91.8
2333 Male, age 80, both hemispheres 81.8
2325 Male, age 76, both hemispheres 78.2
Spinal trigeminal nucleus, caudal
nTPM: 94.9
2308 Male, age 80, both hemispheres 110.8
2390 Female, age 91, both hemispheres 98.1
2447 Male, age 76, both hemispheres 95.1
2642 Male, age 74, both hemispheres 90.4
2312 Male, age 61, both hemispheres 80.3
Spinal trigeminal nucleus, interpolar
nTPM: 97.4
2386 Female, age 85, both hemispheres 119.2
2389 Female, age 91, both hemispheres 105.8
2033 Male, age 80, both hemispheres 94.6
2066 Male, age 76, right hemisphere 90.0
2625 Male, age 61, both hemispheres 77.5
Spinal trigeminal nucleus, oral
nTPM: 78.0
2164 Male, age 80, both hemispheres 84.9
2737 Female, age 85, both hemispheres 78.9
1978 Male, age 76, both hemispheres 70.3
Spinal vestibular nucleus
nTPM: 101.1
2806 Female, age 85, both hemispheres 127.8
2384 Male, age 74, both hemispheres 124.8
2186 Female, age 91, both hemispheres 93.5
2748 Male, age 76, both hemispheres 88.5
2780 Male, age 80, both hemispheres 86.1
2796 Male, age 61, both hemispheres 85.7
Subcoeruleus area
nTPM: 87.0
2369 Female, age 85, left hemisphere 96.7
2089 Male, age 76, left hemisphere 96.1
1958 Male, age 80, both hemispheres 93.5
2323 Female, age 91, left hemisphere 80.3
2451 Male, age 74, both hemispheres 68.4
Superior olive
nTPM: 128.7
2364 Male, age 74, right hemisphere 207.6
1875 Female, age 85, both hemispheres 125.2
2561 Female, age 91, both hemispheres 110.6
2020 Male, age 76, both hemispheres 101.1
2329 Male, age 80, right hemisphere 98.8
Superior vestibular nucleus
nTPM: 104.7
2383 Male, age 74, both hemispheres 110.9
2015 Male, age 80, both hemispheres 108.7
2061 Male, age 76, both hemispheres 94.6
Ventral medullary reticular nucleus
nTPM: 98.4
2372 Male, age 61, both hemispheres 122.2
2060 Male, age 76, both hemispheres 74.6
Ventral periolivary nuclei
nTPM: 119.7
2130 Female, age 85, both hemispheres 130.0
2165 Male, age 80, both hemispheres 127.2
2794 Female, age 91, left hemisphere 112.1
2023 Male, age 76, both hemispheres 109.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 110.0
2302 Female, age 91, both hemispheres 133.8
2741 Female, age 85, both hemispheres 129.4
2118 Male, age 80, both hemispheres 119.9
2180 Male, age 61, both hemispheres 86.0
1986 Male, age 76, both hemispheres 80.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 109.6
2456 Female, age 91, both hemispheres 154.7
2449 Male, age 74, both hemispheres 145.3
1959 Male, age 76, both hemispheres 95.6
2161 Male, age 80, both hemispheres 94.2
2840 Female, age 85, both hemispheres 92.1
2359 Male, age 61, both hemispheres 75.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 284.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 155.6
FF:10182-103D2 60 years, female 169.8
FF:10165-103B3 76 years, female 141.4
Medulla oblongata
Scaled Tags Per Million: 184.6
FF:10174-103C3 60 years, female 234.2
FF:10038-101F2 18-64 years, mixed 187.6
FF:10155-103A2 76 years, female 131.9
Pons
Scaled Tags Per Million: 284.5
FF:10033-101E6 18-54 years, mixed 284.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 141.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 141.6
Samples: 4

Max nTPM: 195.4
Min nTPM: 111.5
Sample A Female 129.5
Sample B Female 111.5
Sample C Male 130.0
Sample D Male 195.4
Pons
nTPM: 133.1
Samples: 4

Max nTPM: 170.1
Min nTPM: 89.8
Sample A Female 89.8
Sample B Female 120.8
Sample C Male 170.1
Sample D Male 151.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 198.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 198.4
Samples: 4

Max nTPM: 218.6
Min nTPM: 188.3
Sample A Male 188.3
Sample B Male 189.0
Sample C Female 197.6
Sample D Female 218.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.2
70439123 Antisense, RP_050614_03_C01, Mouse strain C57BL/6J (56 days, male) 4.9
74750020 Antisense, RP_060220_05_E10, Mouse strain C57BL/6J (56 days, male) 3.5
Pons
Expression energy: 3.3
70439123 Antisense, RP_050614_03_C01, Mouse strain C57BL/6J (56 days, male) 3.4
74750020 Antisense, RP_060220_05_E10, Mouse strain C57BL/6J (56 days, male) 3.2

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