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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Not detected
Mouse brain, Intensity
Cerebellumi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

87.813
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:43.5 nTPM
HPA Brain:49.8 nTPM
GTEx:43.5 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:8.3 nTPM
Allen mouse:4.8 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012082
Purkinje cells Not detected
Cells in granular layer Not detected
Cells in molecular layer Not detected



CEREBELLUM - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA012395
Cerebellum mean intensity 87.813
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Vestibulocerebellar nucleus -
Moleuclar layer of the cerebellum 55.117
Purkinje layer of the cerebellum 87.813
Granular layer of the cerebellum 45.705

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.8
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 39.8
1769 Male, age 76, right hemisphere 45.6
1788 Male, age 55, unknown 45.3
1774 Male, age 80, left hemisphere 43.0
2055 Female, age 91, right hemisphere 42.8
2003 Female, age 85, right hemisphere 39.0
1768 Female, age 72, unknown 34.4
2006 Male, age 61, right hemisphere 34.4
2101 Male, age 74, right hemisphere 34.1
Cerebellar nuclei
nTPM: 31.2
2005 Male, age 80, left hemisphere 36.0
1879 Male, age 55, unknown 33.2
1966 Female, age 91, left hemisphere 32.9
2175 Male, age 61, right hemisphere 32.3
2318 Male, age 74, left hemisphere 31.9
2177 Female, age 85, both hemispheres 31.3
1871 Male, age 74, unknown 30.4
2882 Male, age 76, left hemisphere 29.0
2783 Female, age 72, unknown 24.0
Flocculonodular lobe
nTPM: 49.8
2004 Male, age 61, right hemisphere 71.5
1835 Female, age 85, right hemisphere 49.5
1771 Male, age 80, left hemisphere 47.1
1792 Male, age 74, unknown 47.1
1765 Male, age 55, unknown 46.0
1767 Male, age 76, left hemisphere 46.0
2176 Female, age 91, right hemisphere 41.6
Vermis
nTPM: 41.8
1988 Female, age 85, left hemisphere 49.3
2460 Male, age 61, both hemispheres 48.7
1825 Male, age 74, unknown 46.8
1766 Male, age 55, unknown 42.6
1778 Female, age 91, left hemisphere 40.4
2834 Male, age 80, left hemisphere 39.9
1770 Male, age 76, left hemisphere 38.3
1928 Female, age 72, unknown 38.2
1751 Male, age 74, right hemisphere 31.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 38.2
Samples: 215

Max nTPM: 78.4
Min nTPM: 17.3
Std nTPM: 8.0
Median nTPM: 37.5
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 78.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 71.4
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 63.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 61.5
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 61.0
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 59.6
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 58.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 56.1
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 54.2
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 52.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 50.5
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 50.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 50.1
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 49.9
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 49.7
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 49.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 47.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 46.9
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 46.8
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 46.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 46.7
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 46.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 46.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 45.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 45.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 45.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 45.2
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 45.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 44.9
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 44.7
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 44.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 44.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 44.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 43.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 43.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 43.8
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 43.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 43.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 43.4
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 43.4
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 43.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 43.2
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 43.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 43.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 43.0
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 42.7
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 42.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 42.5
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 42.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 42.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 42.2
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 42.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 42.0
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 42.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 41.9
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 41.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 41.7
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 41.7
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 41.7
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 41.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 40.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 40.8
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 40.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 40.7
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 40.7
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 40.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 40.7
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 40.6
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 40.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 40.5
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 40.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 40.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 40.3
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 40.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 39.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 39.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 39.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 39.7
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 39.5
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 39.4
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 39.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 39.3
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 39.2
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 39.2
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 39.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 39.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 39.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 38.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 38.7
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 38.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 38.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 38.3
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 38.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 38.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 38.3
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 38.1
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 38.1
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 38.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 38.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 37.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 37.9
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 37.8
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 37.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 37.8
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 37.7
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 37.5
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 37.5
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 37.5
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 37.4
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 37.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 37.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 37.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 37.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 37.3
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 37.1
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 36.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 36.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 36.8
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 36.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 36.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 36.7
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 36.6
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 36.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 36.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 36.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 36.2
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 36.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 36.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 36.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 35.8
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 35.7
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 35.7
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 35.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 35.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 35.6
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 35.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 35.4
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 35.4
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 35.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 35.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 35.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 34.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 34.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 34.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 34.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 34.5
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 34.5
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 34.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 34.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 34.2
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 34.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 34.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 33.9
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 33.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 33.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 33.7
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 33.7
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 33.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 33.7
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 33.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 33.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 33.5
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 33.4
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 33.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 33.3
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 33.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 33.2
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 33.1
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 33.1
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 33.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 32.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 32.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 32.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 32.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 32.4
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 32.4
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 32.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 32.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 32.2
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 32.1
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 32.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 31.8
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 31.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 31.8
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 31.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 31.6
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 31.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 31.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 31.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 30.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 29.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 29.8
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 29.8
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 29.8
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 29.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 29.4
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 29.3
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 29.3
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 29.3
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 28.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 28.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 27.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 27.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 27.3
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 26.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 25.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 25.1
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 24.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 24.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 24.0
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 23.6
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 23.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 21.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 17.6
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 17.3
Show allShow less
Brain - Cerebellum
Average nTPM: 43.5
Samples: 241

Max nTPM: 91.7
Min nTPM: 29.4
Std nTPM: 7.8
Median nTPM: 42.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 91.7
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 91.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 90.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 80.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 61.5
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 58.0
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 57.0
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 56.8
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 56.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 55.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 55.1
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 54.7
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 54.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 52.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 52.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 51.8
GTEX-11EI6-2926-SM-5985U 60-69 years, male 51.6
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 51.6
GTEX-11DYG-2926-SM-5H132 60-69 years, male 51.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 51.2
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 51.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 51.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 50.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 50.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 50.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 50.2
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 49.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 49.9
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 49.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 49.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 49.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 48.4
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 48.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 48.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 48.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 48.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 47.9
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 47.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 47.8
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 47.7
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 47.5
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 47.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 47.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 47.4
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 47.2
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 47.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 47.1
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 47.0
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 46.8
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 46.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 46.7
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 46.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 46.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 46.4
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 46.4
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 46.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 46.3
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 46.3
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 46.3
GTEX-14E6D-2926-SM-664OP 50-59 years, male 46.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 46.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 46.1
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 46.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 45.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 45.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 45.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 45.6
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 45.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 45.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 45.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 45.3
GTEX-WL46-2826-SM-3LK81 50-59 years, male 45.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 45.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 45.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 45.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 45.1
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 45.1
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 45.1
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 45.1
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 44.9
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 44.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 44.8
GTEX-1192X-3226-SM-5987D 50-59 years, male 44.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 44.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 44.7
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 44.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 44.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 44.5
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 44.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 44.3
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 44.3
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 44.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 44.2
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 44.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 44.0
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 44.0
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 43.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 43.9
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 43.7
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 43.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 43.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 43.4
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 43.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 43.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 43.2
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 43.0
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 43.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 43.0
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 42.8
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 42.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 42.8
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 42.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 42.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 42.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 42.5
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 42.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 42.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 42.4
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 42.3
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 42.3
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 42.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 42.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 42.2
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 42.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 42.1
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 42.0
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 42.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 42.0
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 41.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 41.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 41.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 41.8
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 41.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 41.7
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 41.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 41.7
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 41.6
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 41.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 41.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 41.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 41.4
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 41.3
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 41.3
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 41.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 41.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 41.2
GTEX-15G19-2826-SM-6M48K 60-69 years, male 41.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 41.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 41.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 41.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 41.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 41.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 40.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 40.9
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 40.9
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 40.8
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 40.8
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 40.7
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 40.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 40.6
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 40.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 40.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 40.3
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 40.3
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 40.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 40.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 40.0
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 40.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 40.0
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 40.0
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 39.9
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 39.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 39.8
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 39.8
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 39.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 39.7
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 39.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 39.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 39.5
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 39.4
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 39.2
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 39.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 39.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 39.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 38.9
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 38.8
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 38.7
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 38.6
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 38.3
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 38.3
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 38.2
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 38.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 38.2
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 38.2
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 38.2
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 38.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 37.9
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 37.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 37.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 37.6
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 37.6
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 37.5
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 37.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 37.4
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 37.3
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 37.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 37.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 37.2
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 37.2
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 37.0
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 36.9
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 36.7
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 36.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 36.6
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 36.5
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 36.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 36.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 36.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 36.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 36.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 36.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 35.7
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 35.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 35.5
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 35.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 35.4
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 35.2
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 35.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 35.0
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 35.0
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 34.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 34.6
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 34.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 34.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 34.2
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 33.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 33.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 32.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 31.6
GTEX-RU72-2926-SM-2TF66 50-59 years, female 31.0
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 29.4
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 40.1
FF:10083-102B2 22-68 years, mixed 41.6
FF:10166-103B4 76 years, female 38.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.2
Pig sample Sample description nTPM
Cerebellum
nTPM: 24.2
Samples: 4

Max nTPM: 27.4
Min nTPM: 21.2
Sample A Female 27.4
Sample B Female 23.8
Sample C Male 21.2
Sample D Male 24.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.3
Mouse sample Sample description nTPM
Cerebellum
nTPM: 8.3
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.7
Sample A Male 9.0
Sample B Male 7.7
Sample C Female 7.8
Sample D Female 8.7

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 4.8
70194648 Antisense, RP_050517_01_G10, Mouse strain C57BL/6J (56 days, male) 4.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org