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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
487.4
nTPM
FANTOM5:
130.2
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
487.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 462.5
2090
Male, age 80, both hemispheres
489.6
2188
Female, age 91, both hemispheres
469.4
2301
Female, age 85, both hemispheres
468.4
1984
Male, age 76, both hemispheres
422.4
Dorsal cochlear nucleus nTPM: 479.8
2802
Male, age 74, right hemisphere
511.3
2378
Male, age 80, both hemispheres
490.4
2187
Female, age 91, both hemispheres
486.1
2370
Male, age 61, both hemispheres
459.2
2058
Male, age 76, both hemispheres
451.9
Dorsal tegmental nucleus nTPM: 479.0
2326
Male, age 74, both hemispheres
501.7
2358
Male, age 61, both hemispheres
499.3
2083
Male, age 80, both hemispheres
481.5
1936
Male, age 76, left hemisphere
433.5
Dorsolateral tegmental area nTPM: 474.8
2337
Male, age 61, both hemispheres
629.9
2654
Male, age 80, both hemispheres
495.3
2751
Female, age 85, both hemispheres
432.9
2360
Male, age 74, both hemispheres
424.0
2141
Male, age 76, both hemispheres
391.9
Kolliker-Fuse nucleus nTPM: 478.5
2315
Male, age 76, right hemisphere
542.4
2793
Female, age 91, left hemisphere
467.2
2163
Male, age 80, both hemispheres
425.9
Lateral lemniscal nuclei nTPM: 386.3
2320
Female, age 91, left hemisphere
416.7
2746
Female, age 85, left hemisphere
403.2
2453
Male, age 74, right hemisphere
387.5
2169
Male, age 76, both hemispheres
385.9
2036
Male, age 80, both hemispheres
338.3
Lateral parabrachial nucleus nTPM: 451.3
2792
Male, age 76, both hemispheres
509.7
2013
Male, age 80, both hemispheres
487.3
2139
Female, age 85, right hemisphere
428.1
2790
Male, age 61, both hemispheres
380.1
Lateral vestibular nucleus nTPM: 487.4
2311
Male, age 80, both hemispheres
562.7
2184
Male, age 76, both hemispheres
412.0
Locus coeruleus nTPM: 398.5
2162
Male, age 80, both hemispheres
444.5
2720
Male, age 74, both hemispheres
432.8
1980
Male, age 76, both hemispheres
406.2
2317
Female, age 72, unknown
400.8
2123
Female, age 91, both hemispheres
400.0
2014
Male, age 55, unknown
399.7
2788
Male, age 74, unknown
305.6
Medial parabrachial nucleus nTPM: 450.9
2170
Female, age 91, both hemispheres
511.2
2463
Female, age 85, right hemisphere
457.9
2156
Male, age 61, both hemispheres
444.9
2786
Male, age 76, both hemispheres
422.8
2854
Male, age 80, both hemispheres
417.8
Medial periolivary nuclei nTPM: 407.1
2063
Male, age 76, both hemispheres
456.7
2081
Male, age 80, both hemispheres
432.9
2458
Female, age 91, both hemispheres
413.2
2171
Female, age 85, both hemispheres
385.1
2791
Male, age 74, right hemisphere
347.7
Motor facial nucleus nTPM: 413.0
2062
Male, age 76, both hemispheres
453.8
2795
Female, age 91, both hemispheres
442.5
2126
Male, age 61, both hemispheres
420.7
2697
Female, age 85, both hemispheres
403.4
2365
Male, age 74, right hemisphere
397.5
2327
Male, age 80, both hemispheres
359.8
Motor trigeminal nucleus nTPM: 427.3
2335
Male, age 61, both hemispheres
451.5
2560
Male, age 74, both hemispheres
449.6
2321
Female, age 91, both hemispheres
441.5
2309
Male, age 76, both hemispheres
421.3
2079
Male, age 80, both hemispheres
372.7
Nuclei of the trapezoid body nTPM: 418.2
1983
Male, age 76, both hemispheres
507.6
2368
Female, age 91, both hemispheres
428.9
2166
Male, age 80, both hemispheres
410.9
2159
Male, age 61, both hemispheres
377.3
2735
Female, age 85, both hemispheres
366.3
Nucleus raphe magnus nTPM: 399.0
2051
Male, age 76, both hemispheres
445.9
2459
Female, age 91, both hemispheres
415.2
2328
Male, age 80, both hemispheres
408.9
2455
Male, age 74, both hemispheres
381.2
2172
Female, age 85, both hemispheres
376.2
2160
Male, age 61, both hemispheres
366.8
Paramedian reticular nucleus nTPM: 404.2
2057
Male, age 80, both hemispheres
424.3
2313
Male, age 61, both hemispheres
416.9
2052
Male, age 76, both hemispheres
405.0
2050
Female, age 85, both hemispheres
370.5
Pedunculopontine tegmental nucleus nTPM: 443.3
2338
Male, age 61, both hemispheres
496.4
2334
Male, age 80, both hemispheres
465.7
1921
Female, age 85, both hemispheres
367.9
Pontine nuclei nTPM: 414.1
2319
Female, age 91, both hemispheres
468.6
1968
Male, age 76, left hemisphere
455.3
2115
Male, age 80, left hemisphere
425.1
1863
Male, age 55, unknown
422.2
2787
Female, age 85, both hemispheres
421.3
2109
Female, age 72, unknown
398.9
2454
Male, age 74, left hemisphere
372.7
2727
Male, age 61, right hemisphere
348.8
Pontine raphe nucleus nTPM: 402.0
2853
Male, age 76, midline
404.9
2122
Female, age 85, midline
399.2
Posteroventral cochlear nucleus nTPM: 460.3
2371
Male, age 61, both hemispheres
501.7
2135
Female, age 91, both hemispheres
484.5
2341
Male, age 80, both hemispheres
473.7
2752
Female, age 85, both hemispheres
421.1
2070
Male, age 76, both hemispheres
420.2
Principal sensory trigeminal nucleus nTPM: 391.9
2324
Male, age 76, both hemispheres
427.9
2367
Female, age 91, left hemisphere
413.0
2158
Male, age 61, both hemispheres
381.9
2008
Male, age 80, left hemisphere
344.7
Reticular pontine nucleus, caudal nTPM: 440.3
2457
Female, age 91, both hemispheres
503.9
2092
Male, age 76, both hemispheres
447.2
2559
Male, age 74, both hemispheres
438.6
2332
Male, age 80, right hemisphere
371.5
Reticular pontine nucleus, oral nTPM: 427.5
2366
Female, age 91, both hemispheres
461.9
2167
Male, age 76, both hemispheres
455.3
1939
Male, age 80, both hemispheres
429.8
2361
Male, age 74, both hemispheres
424.0
2012
Female, age 85, both hemispheres
366.7
Reticulotegmental nucleus nTPM: 449.1
2452
Male, age 74, both hemispheres
529.7
2322
Female, age 91, both hemispheres
445.4
2333
Male, age 80, both hemispheres
431.8
2325
Male, age 76, both hemispheres
389.5
Spinal trigeminal nucleus, oral nTPM: 415.7
2164
Male, age 80, both hemispheres
448.6
1978
Male, age 76, both hemispheres
437.3
2737
Female, age 85, both hemispheres
361.3
Subcoeruleus area nTPM: 435.1
2451
Male, age 74, both hemispheres
576.8
2369
Female, age 85, left hemisphere
440.2
2323
Female, age 91, left hemisphere
405.5
1958
Male, age 80, both hemispheres
385.6
2089
Male, age 76, left hemisphere
367.6
Superior olive nTPM: 392.9
2020
Male, age 76, both hemispheres
470.5
2561
Female, age 91, both hemispheres
426.8
2364
Male, age 74, right hemisphere
378.2
2329
Male, age 80, right hemisphere
370.0
1875
Female, age 85, both hemispheres
318.8
Ventral periolivary nuclei nTPM: 393.2
2023
Male, age 76, both hemispheres
426.4
2165
Male, age 80, both hemispheres
399.3
2794
Female, age 91, left hemisphere
387.6
2130
Female, age 85, both hemispheres
359.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 419.8
2161
Male, age 80, both hemispheres
463.1
2359
Male, age 61, both hemispheres
435.8
2456
Female, age 91, both hemispheres
423.2
1959
Male, age 76, both hemispheres
411.0
2840
Female, age 85, both hemispheres
397.8
2449
Male, age 74, both hemispheres
387.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
