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RPL18
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:929.9 nTPM
HPA:802.0 nTPM
GTEx:929.9 nTPM
FANTOM5:335.6 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046572
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

802.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1010.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 801.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 717.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 678.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

929.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 929.9
Samples: 187

Max nTPM: 1948.9
Min nTPM: 528.5
Std nTPM: 246.8
Median nTPM: 890.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1948.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 1632.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1588.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1561.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1540.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1519.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1497.7
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1439.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1437.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1407.8
GTEX-183FY-1626-SM-793D8 20-29 years, male 1402.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1354.8
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1344.9
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1302.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1283.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1277.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1272.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1267.4
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1255.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1239.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1214.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1199.2
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1196.5
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1190.4
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1186.5
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1181.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1179.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1177.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1175.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1173.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1172.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1168.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1140.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1138.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1137.5
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1132.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1121.2
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1120.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1120.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1118.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1110.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1104.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1099.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1098.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1095.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1093.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1089.8
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1085.8
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1065.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1061.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1061.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1059.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1056.4
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1054.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1052.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1038.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1031.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1030.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1025.8
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1025.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1018.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1015.4
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1012.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1011.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 1008.5
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1008.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1008.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1007.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 992.2
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 991.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 982.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 981.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 977.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 977.2
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 969.3
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 967.4
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 964.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 963.6
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 963.2
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 956.8
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 941.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 932.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 924.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 922.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 918.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 913.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 912.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 902.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 900.2
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 899.6
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 898.0
GTEX-1192X-2526-SM-59868 50-59 years, male 896.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 893.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 890.2
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 878.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 874.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 866.0
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 862.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 859.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 856.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 855.8
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 852.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 849.4
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 849.0
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 843.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 834.5
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 834.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 831.0
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 830.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 826.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 825.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 821.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 819.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 819.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 817.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 816.6
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 814.6
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 809.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 807.1
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 802.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 798.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 795.4
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 786.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 785.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 781.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 780.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 776.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 775.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 773.1
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 767.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 763.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 762.2
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 759.6
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 757.5
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 756.0
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 755.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 755.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 747.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 737.4
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 734.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 729.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 729.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 729.4
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 726.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 721.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 720.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 718.2
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 716.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 709.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 707.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 703.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 696.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 692.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 691.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 691.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 691.1
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 690.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 687.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 685.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 683.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 679.8
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 678.9
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 678.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 677.7
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 674.0
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 671.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 670.8
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 669.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 667.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 665.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 659.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 652.4
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 651.0
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 642.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 637.1
GTEX-YFCO-1326-SM-664NV 40-49 years, male 635.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 620.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 609.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 601.7
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 590.7
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 590.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 588.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 576.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 564.7
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 560.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 549.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 528.5
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

335.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 335.6
FF:10024-101D6 15,40,85 years, mixed 335.6

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