HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:299.6 nTPM
HPA Brain:273.8 nTPM
GTEx:299.6 nTPM
FANTOM5:164.1 Scaled Tags Per Million
Pig:211.6 nTPM
Mouse:77.5 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 273.8
Sample id Sample description nTPM
Hippocampus
nTPM: 166.9
2621 Female, age 67, right hemisphere 204.7
1855 Male, age 76, left hemisphere 191.7
2529 Female, age 94, left hemisphere 167.4
1911 Female, age 85, right hemisphere 155.0
2148 Female, age 91, left hemisphere 143.0
1898 Male, age 80, left hemisphere 139.3
Dentate gyrus
nTPM: 163.5
2531 Female, age 67, both hemispheres 235.8
2530 Female, age 94, left hemisphere 184.8
1927 Female, age 91, both hemispheres 157.9
2246 Female, age 85, both hemispheres 149.9
2010 Male, age 76, both hemispheres 149.5
2528 Male, age 74, both hemispheres 103.3
Entorhinal gyrus
nTPM: 192.3
2613 Female, age 94, left hemisphere 236.8
2686 Male, age 75, right hemisphere 208.7
1787 Male, age 76, left hemisphere 202.9
2764 Male, age 80, right hemisphere 202.4
1938 Female, age 85, left hemisphere 179.0
2117 Female, age 91, right hemisphere 123.7
Hippocampus, CA1
nTPM: 183.1
2749 Male, age 80, left hemisphere 278.7
2045 Male, age 76, both hemispheres 216.0
2527 Male, age 74, both hemispheres 150.7
2082 Female, age 91, right hemisphere 148.8
1873 Female, age 85, both hemispheres 121.1
Hippocampus, CA2
nTPM: 164.3
1892 Male, age 76, both hemispheres 212.1
1940 Female, age 85, left hemisphere 179.6
2113 Female, age 91, right hemisphere 171.1
1963 Male, age 80, left hemisphere 160.6
2437 Female, age 94, left hemisphere 157.1
2249 Male, age 74, both hemispheres 105.5
Hippocampus, CA3
nTPM: 192.8
2137 Male, age 80, left hemisphere 328.6
1867 Male, age 76, both hemispheres 231.9
2861 Female, age 67, both hemispheres 224.7
2620 Female, age 94, left hemisphere 153.6
1891 Female, age 85, both hemispheres 119.2
2436 Male, age 74, both hemispheres 98.5
Parahippocampal cortex
nTPM: 223.5
2622 Female, age 67, right hemisphere 299.7
2245 Female, age 91, both hemispheres 298.8
2532 Female, age 72, left hemisphere 260.3
2018 Male, age 76, both hemispheres 252.0
2693 Female, age 94, both hemispheres 226.5
2250 Female, age 67, right hemisphere 217.5
1850 Male, age 80, both hemispheres 210.1
1933 Female, age 85, both hemispheres 176.0
1990 Female, age 91, right hemisphere 159.1
2692 Male, age 74, both hemispheres 135.0
Perirhinal gyrus
nTPM: 273.8
2521 Female, age 94, right hemisphere 348.9
1794 Male, age 80, right hemisphere 295.4
2848 Male, age 76, right hemisphere 273.5
1841 Female, age 85, right hemisphere 242.0
1847 Female, age 91, left hemisphere 209.3
Subiculum
nTPM: 149.7
2042 Male, age 76, both hemispheres 172.5
1901 Male, age 80, both hemispheres 163.5
1977 Female, age 85, both hemispheres 158.8
2438 Female, age 94, left hemisphere 153.2
2619 Male, age 74, both hemispheres 130.4
2729 Female, age 91, right hemisphere 119.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 299.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 299.6
Samples: 197

Max nTPM: 972.1
Min nTPM: 46.1
Std nTPM: 151.7
Median nTPM: 263.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 972.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 801.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 747.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 743.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 665.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 661.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 636.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 623.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 619.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 607.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 594.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 164.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 164.1
FF:10153-102I9 76 years, female 242.1
FF:10169-103B7 60 years, female 86.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 211.6
Pig sample Sample description nTPM
Subiculum
nTPM: 191.8
Samples: 4

Max nTPM: 257.8
Min nTPM: 143.0
Sample A Female 257.8
Sample B Female 178.3
Sample C Male 188.0
Sample D Male 143.0
Dorsal hippocampus
nTPM: 205.4
Samples: 4

Max nTPM: 248.2
Min nTPM: 124.0
Sample A Female 248.2
Sample B Female 216.0
Sample C Male 233.5
Sample D Male 124.0
Entorhinal cortex
nTPM: 211.6
Samples: 4

Max nTPM: 273.0
Min nTPM: 174.4
Sample A Female 192.8
Sample B Female 206.2
Sample C Male 273.0
Sample D Male 174.4
Ventral hippocampus
nTPM: 208.9
Samples: 4

Max nTPM: 239.6
Min nTPM: 171.7
Sample A Female 185.8
Sample B Female 171.7
Sample C Male 238.5
Sample D Male 239.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 77.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 77.5
Samples: 4

Max nTPM: 85.5
Min nTPM: 71.7
Sample A Male 80.7
Sample B Male 85.5
Sample C Female 72.0
Sample D Female 71.7
Hippocampal formation
nTPM: 69.0
Samples: 4

Max nTPM: 73.5
Min nTPM: 64.3
Sample A Male 73.5
Sample B Male 65.6
Sample C Female 64.3
Sample D Female 72.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
68797501 Antisense, RP_050125_02_E12, Mouse strain C57BL/6J (56 days, male) 11.6

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