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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
58.2
nTPM
HPA Brain:
139.4
nTPM
GTEx:
58.2
nTPM
FANTOM5:
156.0
Scaled Tags Per Million
Pig:
34.6
nTPM
Mouse:
25.6
nTPM
Allen mouse:
4.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
139.4
Sample id
Sample description
nTPM
Amygdala nTPM: 107.9
2814
Male, age 76, right hemisphere
132.4
2517
Female, age 94, left hemisphere
114.4
2514
Male, age 75, right hemisphere
111.6
1987
Female, age 91, left hemisphere
107.3
2695
Female, age 67, right hemisphere
73.7
Basal amygdala nTPM: 139.4
2685
Female, age 94, left hemisphere
162.5
2827
Female, age 67, right hemisphere
159.3
2243
Female, age 91, right hemisphere
148.9
2609
Male, age 75, right hemisphere
136.9
1955
Male, age 76, both hemispheres
128.6
2110
Male, age 80, left hemisphere
100.1
Central amygdala nTPM: 134.2
2826
Female, age 94, left hemisphere
155.5
1905
Male, age 76, both hemispheres
146.5
2515
Male, age 75, right hemisphere
137.0
2239
Male, age 80, left hemisphere
123.9
2701
Female, age 91, right hemisphere
107.9
Corticomedial amygdala nTPM: 132.0
2535
Female, age 67, right hemisphere
169.1
2242
Female, age 91, right hemisphere
148.7
2428
Male, age 75, right hemisphere
130.1
2429
Female, age 94, left hemisphere
121.7
2240
Male, age 76, both hemispheres
112.6
2829
Male, age 80, left hemisphere
109.8
Lateral amygdala nTPM: 128.1
2534
Female, age 94, left hemisphere
157.7
2256
Male, age 80, left hemisphere
139.5
2255
Female, age 91, right hemisphere
135.8
1883
Male, age 76, both hemispheres
112.7
2516
Male, age 75, right hemisphere
111.4
2830
Female, age 67, right hemisphere
111.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 58.2
Samples: 152
Max nTPM: 92.5
Min nTPM: 14.8
Std nTPM: 14.3
Median nTPM: 58.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
92.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
91.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
86.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
85.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
85.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
84.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
83.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
83.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
82.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
80.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
79.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
79.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
78.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
77.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
77.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
76.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
76.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
76.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
74.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
73.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
73.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
72.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
72.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
72.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
71.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
71.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
71.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
70.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
69.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
69.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
68.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
68.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
68.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
68.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
68.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
67.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
67.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
67.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
66.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
66.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
66.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
66.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
66.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
65.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
65.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
65.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
65.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
64.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
64.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
64.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
64.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
64.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
63.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
63.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
63.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
63.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
63.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
63.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
63.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
63.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
63.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
62.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
61.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
61.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
61.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
61.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
61.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
61.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
60.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
60.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
60.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
60.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
60.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
59.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
59.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
58.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
58.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
58.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
58.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
58.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
58.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
57.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
57.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
57.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
57.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
56.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
56.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
56.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
56.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
56.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
56.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
56.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
55.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
55.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
54.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
54.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
54.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
54.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
54.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
54.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
54.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
53.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
53.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
53.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
52.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
52.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
52.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
52.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
51.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
51.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
50.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
50.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
49.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
49.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
49.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
48.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
47.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
47.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
47.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
47.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
46.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
46.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
44.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
44.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
43.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
42.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
42.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
42.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
41.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
41.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
41.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
40.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
39.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
37.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
37.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
36.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
36.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
33.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
33.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
33.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
32.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
29.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
29.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
29.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
28.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
27.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
14.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 25.6
Samples: 4
Max nTPM: 27.3
Min nTPM: 24.4
Sample A
Male
25.0
Sample B
Male
25.5
Sample C
Female
27.3
Sample D
Female
24.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.