HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:55.6 nTPM
HPA Brain:135.6 nTPM
GTEx:55.6 nTPM
FANTOM5:114.9 Scaled Tags Per Million
Pig:38.9 nTPM
Mouse:51.3 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 135.6
Sample id Sample description nTPM
Hippocampus
nTPM: 126.8
2621 Female, age 67, right hemisphere 140.2
2148 Female, age 91, left hemisphere 137.3
1911 Female, age 85, right hemisphere 131.1
2529 Female, age 94, left hemisphere 120.0
1898 Male, age 80, left hemisphere 116.9
1855 Male, age 76, left hemisphere 115.1
Dentate gyrus
nTPM: 129.3
2531 Female, age 67, both hemispheres 151.0
1927 Female, age 91, both hemispheres 140.1
2530 Female, age 94, left hemisphere 130.9
2528 Male, age 74, both hemispheres 129.3
2246 Female, age 85, both hemispheres 124.3
2010 Male, age 76, both hemispheres 100.3
Entorhinal gyrus
nTPM: 135.6
2686 Male, age 75, right hemisphere 157.7
2613 Female, age 94, left hemisphere 150.8
2764 Male, age 80, right hemisphere 140.7
1787 Male, age 76, left hemisphere 131.5
1938 Female, age 85, left hemisphere 120.3
2117 Female, age 91, right hemisphere 112.5
Hippocampus, CA1
nTPM: 122.2
2527 Male, age 74, both hemispheres 148.7
1873 Female, age 85, both hemispheres 128.5
2749 Male, age 80, left hemisphere 127.4
2082 Female, age 91, right hemisphere 113.9
2045 Male, age 76, both hemispheres 92.3
Hippocampus, CA2
nTPM: 119.7
1963 Male, age 80, left hemisphere 131.3
2249 Male, age 74, both hemispheres 126.9
2437 Female, age 94, left hemisphere 121.7
1892 Male, age 76, both hemispheres 115.6
2113 Female, age 91, right hemisphere 111.8
1940 Female, age 85, left hemisphere 111.2
Hippocampus, CA3
nTPM: 131.2
2861 Female, age 67, both hemispheres 176.8
2620 Female, age 94, left hemisphere 174.5
2137 Male, age 80, left hemisphere 114.4
2436 Male, age 74, both hemispheres 114.2
1867 Male, age 76, both hemispheres 103.8
1891 Female, age 85, both hemispheres 103.6
Parahippocampal cortex
nTPM: 133.8
2622 Female, age 67, right hemisphere 193.1
2692 Male, age 74, both hemispheres 153.9
2693 Female, age 94, both hemispheres 147.6
2250 Female, age 67, right hemisphere 135.5
2245 Female, age 91, both hemispheres 134.2
1933 Female, age 85, both hemispheres 126.4
2532 Female, age 72, left hemisphere 122.5
1990 Female, age 91, right hemisphere 122.3
1850 Male, age 80, both hemispheres 105.7
2018 Male, age 76, both hemispheres 97.2
Perirhinal gyrus
nTPM: 121.2
2521 Female, age 94, right hemisphere 131.8
1847 Female, age 91, left hemisphere 126.4
1794 Male, age 80, right hemisphere 121.6
1841 Female, age 85, right hemisphere 116.6
2848 Male, age 76, right hemisphere 109.6
Subiculum
nTPM: 111.5
2619 Male, age 74, both hemispheres 150.7
2729 Female, age 91, right hemisphere 122.7
1977 Female, age 85, both hemispheres 114.2
2438 Female, age 94, left hemisphere 95.9
1901 Male, age 80, both hemispheres 95.3
2042 Male, age 76, both hemispheres 90.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 55.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.6
Samples: 197

Max nTPM: 95.4
Min nTPM: 15.9
Std nTPM: 17.8
Median nTPM: 55.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 95.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 94.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 94.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 93.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 93.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 93.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 91.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 89.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 88.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 86.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 114.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.9
FF:10153-102I9 76 years, female 137.5
FF:10169-103B7 60 years, female 92.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 38.9
Pig sample Sample description nTPM
Subiculum
nTPM: 35.9
Samples: 4

Max nTPM: 42.1
Min nTPM: 30.0
Sample A Female 42.1
Sample B Female 32.5
Sample C Male 38.9
Sample D Male 30.0
Dorsal hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 31.6
Min nTPM: 26.2
Sample A Female 31.6
Sample B Female 31.5
Sample C Male 29.8
Sample D Male 26.2
Entorhinal cortex
nTPM: 39.0
Samples: 4

Max nTPM: 44.4
Min nTPM: 35.7
Sample A Female 35.7
Sample B Female 36.7
Sample C Male 44.4
Sample D Male 39.0
Ventral hippocampus
nTPM: 37.7
Samples: 4

Max nTPM: 51.8
Min nTPM: 31.7
Sample A Female 33.1
Sample B Female 31.7
Sample C Male 51.8
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 51.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 23.8
Min nTPM: 19.7
Sample A Male 21.1
Sample B Male 19.7
Sample C Female 23.8
Sample D Female 23.6
Hippocampal formation
nTPM: 51.3
Samples: 4

Max nTPM: 72.2
Min nTPM: 34.6
Sample A Male 34.6
Sample B Male 55.0
Sample C Female 72.2
Sample D Female 43.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
73994669 Antisense, RP_051214_03_E04, Mouse strain C57BL/6J (56 days, male) 5.7
69734536 Antisense, RP_050503_01_B04, Mouse strain C57BL/6J (56 days, male) 5.6

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