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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:30.1 nTPM
HPA Brain:157.4 nTPM
GTEx:30.1 nTPM
FANTOM5:220.2 Scaled Tags Per Million
Pig:126.9 nTPM
Mouse:152.4 nTPM
Allen mouse:5.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029632Antibody HPA029633Antibody CAB009745
Glial cells Not detectedLowLow
Neuronal cells MediumMediumMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 68.4
1781 Male, age 74, unknown 93.1
2288 Male, age 75, left hemisphere 76.7
2846 Female, age 79, unknown 72.9
1857 Female, age 85, left hemisphere 65.7
2481 Female, age 94, left hemisphere 64.6
2290 Female, age 72, unknown 63.6
1854 Male, age 80, left hemisphere 63.0
2289 Male, age 61, right hemisphere 47.7
Globus pallidus, externus
nTPM: 39.1
2772 Female, age 79, unknown 63.0
2395 Male, age 75, both hemispheres 43.0
1996 Male, age 80, right hemisphere 32.0
2646 Male, age 61, right hemisphere 30.1
2567 Female, age 72, unknown 27.3
Globus pallidus, internus
nTPM: 40.7
1818 Male, age 74, unknown 52.1
2287 Male, age 75, right hemisphere 51.1
2483 Female, age 94, right hemisphere 48.2
2778 Female, age 91, both hemispheres 37.4
2037 Male, age 80, right hemisphere 36.9
2566 Female, age 72, unknown 36.1
2111 Female, age 85, right hemisphere 23.1
Nucleus accumbens
nTPM: 70.7
1856 Female, age 91, right hemisphere 111.1
1783 Male, age 74, unknown 76.8
2824 Male, age 61, right hemisphere 75.1
2698 Female, age 72, unknown 72.5
2286 Male, age 75, left hemisphere 66.4
1806 Female, age 85, left hemisphere 63.8
2391 Female, age 94, left hemisphere 52.5
2732 Male, age 80, right hemisphere 47.7
Nucleus basalis of Meynert
nTPM: 52.4
2393 Male, age 80, right hemisphere 63.0
2821 Male, age 75, both hemispheres 62.6
2484 Female, age 94, left hemisphere 58.7
2569 Male, age 61, both hemispheres 25.3
Nucleus of the diagonal band
nTPM: 156.6
2775 Male, age 80, right hemisphere 184.8
1812 Female, age 91, both hemispheres 179.8
2195 Female, age 85, both hemispheres 171.7
2029 Male, age 61, right hemisphere 163.7
1979 Male, age 74, unknown 83.0
Putamen
nTPM: 62.5
1937 Female, age 91, right hemisphere 87.0
1838 Male, age 80, right hemisphere 79.1
2466 Female, age 79, unknown 74.4
1829 Male, age 74, unknown 65.8
2647 Male, age 75, left hemisphere 48.5
2482 Female, age 94, left hemisphere 48.0
2489 Female, age 72, unknown 34.7
Septal nuclei
nTPM: 131.3
2031 Female, age 72, unknown 183.3
1960 Male, age 74, unknown 178.7
2629 Female, age 94, right hemisphere 164.7
2009 Female, age 91, both hemispheres 158.4
2059 Female, age 85, both hemispheres 98.5
2394 Male, age 61, left hemisphere 70.7
2199 Male, age 80, right hemisphere 65.0
Stria terminalis, bed nucleus
nTPM: 157.4
1974 Female, age 91, both hemispheres 198.7
2486 Female, age 94, both hemispheres 177.2
2201 Male, age 74, unknown 96.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 24.8
Samples: 246

Max nTPM: 148.4
Min nTPM: 5.2
Std nTPM: 13.6
Median nTPM: 24.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 148.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 70.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 65.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 48.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 45.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 44.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 44.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 43.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 42.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 42.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 41.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 41.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 40.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 40.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 40.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 40.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 40.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 39.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 39.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 38.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 38.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 38.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 38.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 37.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 37.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 37.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 36.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 36.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 36.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 36.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 36.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 35.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 35.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 35.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 35.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 35.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 35.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 35.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 35.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 34.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 34.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 34.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 34.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 34.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 34.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 34.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 33.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 33.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 33.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 32.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 32.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 32.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 32.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 31.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 31.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 31.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 30.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 30.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 30.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 30.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 30.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 30.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 29.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 29.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 29.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 29.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 29.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 29.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 29.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 29.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 29.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 29.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 29.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 29.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 28.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 28.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 28.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 28.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 27.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 27.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 27.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 27.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 26.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 26.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 26.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 26.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 26.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 26.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 26.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 26.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 26.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 26.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 26.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 26.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 25.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 25.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 25.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 25.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 25.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 25.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 25.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 25.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 25.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 24.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 24.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 24.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 24.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 24.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 24.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 24.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 24.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 23.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 23.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 23.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 23.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 23.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 23.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 23.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 22.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 22.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 22.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 22.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 22.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 22.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 22.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 21.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 21.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 21.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 21.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 21.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 21.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 20.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 20.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 20.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 20.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 20.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 20.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 20.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 20.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 20.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 20.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 20.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 19.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 19.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 19.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 19.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 18.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 18.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 18.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 18.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 18.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 18.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 18.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 17.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 16.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 16.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 16.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 16.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 16.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 16.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 16.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 15.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 15.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 15.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 15.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 15.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 15.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 15.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 14.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 14.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 14.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 14.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 13.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 13.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 13.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 13.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 13.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 13.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 12.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 12.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 12.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 12.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 12.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 11.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 11.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 11.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 11.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 11.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 11.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 11.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 11.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 10.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 10.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 10.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 10.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 10.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 10.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 10.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 10.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 10.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 9.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 9.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 9.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 9.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 9.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 9.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 9.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 8.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 7.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 7.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 7.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 6.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 6.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 6.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 5.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 30.1
Samples: 246

Max nTPM: 58.5
Min nTPM: 5.5
Std nTPM: 12.3
Median nTPM: 31.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 58.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 58.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 56.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 55.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 51.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 50.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 50.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 49.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 49.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 49.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 49.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 48.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 48.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 48.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 48.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 47.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 47.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 47.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 47.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 47.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 46.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 46.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 46.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 46.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 46.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 46.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 46.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 45.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 45.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 44.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 44.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 43.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 43.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 42.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 42.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 42.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 41.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 41.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 41.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 41.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 41.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 41.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 41.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 41.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 40.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 40.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 40.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 40.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 40.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 40.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 40.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 40.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 40.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 40.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 39.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 39.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 39.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 39.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 39.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 38.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 38.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 38.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 38.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 38.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 38.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 38.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 37.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 37.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 37.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 37.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 37.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 37.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 37.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 37.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 37.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 36.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 36.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 36.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 36.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 35.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 35.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 35.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 35.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 35.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 35.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 35.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 35.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 35.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 35.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 35.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 35.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 34.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 34.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 34.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 34.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 34.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 34.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 33.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 33.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 33.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 33.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 33.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 33.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 33.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 32.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 32.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 32.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 32.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 32.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 32.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 32.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 32.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 32.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 31.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 31.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 31.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 31.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 31.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 31.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 31.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 31.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 31.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 31.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 31.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 31.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 30.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 30.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 30.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 30.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 30.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 29.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 29.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 29.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 29.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 29.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 29.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 29.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 29.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 29.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 29.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 28.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 28.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 28.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 28.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 28.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 28.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 27.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 27.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 27.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 27.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 27.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 27.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 27.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 27.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 26.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 26.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 26.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 26.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 26.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 26.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 25.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 24.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 24.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 24.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 24.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 24.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 24.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 23.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 23.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 23.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 22.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 22.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 22.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 21.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 21.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 21.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 21.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 21.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 21.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 21.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 21.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 21.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 20.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 20.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 20.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 19.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 19.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 19.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 18.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 18.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 18.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 17.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 16.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 16.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 16.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 16.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 16.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 15.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 14.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 14.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 14.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 14.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 13.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 13.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 13.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 13.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 13.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 13.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 13.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 13.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 12.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 12.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 12.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 12.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 11.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 11.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 11.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 10.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 10.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 10.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 10.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 9.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 9.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 9.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 9.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 9.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 8.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 8.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 8.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 8.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 8.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 7.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 6.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 6.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 5.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 5.5
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Brain - Putamen (basal ganglia)
Average nTPM: 22.3
Samples: 205

Max nTPM: 72.8
Min nTPM: 3.4
Std nTPM: 10.9
Median nTPM: 21.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 72.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 53.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 47.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 47.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 43.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 42.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 41.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 40.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 40.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 39.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 39.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 39.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 38.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 38.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 37.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 37.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 37.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 37.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 36.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 36.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 36.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 35.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 35.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 34.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 34.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 34.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 33.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 33.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 33.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 33.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 33.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 33.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 32.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 32.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 32.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 32.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 32.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 31.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 31.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 31.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 30.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 30.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 30.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 30.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 30.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 29.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 29.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 29.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 28.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 28.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 28.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 27.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 27.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 26.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 26.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 26.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 26.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 26.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 26.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 26.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 26.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 26.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 26.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 25.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 25.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 25.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 25.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 24.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 24.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 24.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 24.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 24.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 24.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 24.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 23.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 23.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 23.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 23.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 23.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 23.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 23.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 23.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 22.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 22.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 22.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 22.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 22.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 22.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 22.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 22.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 22.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 22.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 22.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 21.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 21.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 21.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 21.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 21.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 21.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 20.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 20.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 20.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 20.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 20.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 20.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 20.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 20.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 20.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 20.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 20.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 19.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 19.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 19.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 19.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 19.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 19.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 19.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 19.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 18.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 18.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 18.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 18.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 18.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 17.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 17.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 17.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 17.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 17.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 17.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 17.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 16.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 15.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 15.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 15.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 15.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 14.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 14.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 13.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 13.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 13.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 13.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 13.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 13.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 13.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 12.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 12.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 12.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 12.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 11.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 11.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 11.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 11.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 11.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 11.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 10.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 10.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 10.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 9.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 9.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 8.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 8.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 8.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 7.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 7.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 7.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 6.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 6.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 6.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 5.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 3.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 3.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

220.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.7
FF:10164-103B2 76 years, female 82.7
Nucleus accumbens
Scaled Tags Per Million: 220.2
FF:10037-101F1 23-56 years, mixed 220.2
Putamen
Scaled Tags Per Million: 140.4
FF:10176-103C5 60 years, female 140.4
Globus pallidus
Scaled Tags Per Million: 37.4
FF:10175-103C4 60 years, female 50.2
FF:10161-103A8 76 years, female 24.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.9
Pig sample Sample description nTPM
Caudate
nTPM: 96.9
Samples: 4

Max nTPM: 105.8
Min nTPM: 89.2
Sample A Female 94.4
Sample B Female 98.2
Sample C Male 105.8
Sample D Male 89.2
Putamen
nTPM: 95.7
Samples: 4

Max nTPM: 123.1
Min nTPM: 77.0
Sample A Female 77.0
Sample B Female 89.1
Sample C Male 123.1
Sample D Male 93.7
Septum
nTPM: 126.9
Samples: 4

Max nTPM: 151.1
Min nTPM: 80.9
Sample A Female 146.0
Sample B Female 129.5
Sample C Male 151.1
Sample D Male 80.9
Ventral pallidum
nTPM: 123.9
Samples: 4

Max nTPM: 147.5
Min nTPM: 93.1
Sample A Female 144.7
Sample B Female 110.4
Sample C Male 147.5
Sample D Male 93.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 98.1
Samples: 4

Max nTPM: 110.9
Min nTPM: 87.5
Sample A Male 89.2
Sample B Male 87.5
Sample C Female 110.9
Sample D Female 104.8
Septum
nTPM: 140.8
Samples: 4

Max nTPM: 155.2
Min nTPM: 125.2
Sample A Male 155.2
Sample B Male 138.4
Sample C Female 144.4
Sample D Female 125.2
Ventral forebrain
nTPM: 152.4
Samples: 4

Max nTPM: 158.5
Min nTPM: 145.8
Sample A Male 145.8
Sample B Male 151.6
Sample C Female 158.5
Sample D Female 153.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.4
984 Antisense, RP_040227_01_05, Mouse strain C57BL/6J (56 days, male) 3.4
985 Antisense, RP_040227_01_05, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 5.6
984 Antisense, RP_040227_01_05, Mouse strain C57BL/6J (56 days, male) 5.6
985 Antisense, RP_040227_01_05, Mouse strain C57BL/6J (56 days, male) 2.2

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