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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:94.5 nTPM
HPA Brain:255.5 nTPM
GTEx:94.5 nTPM
FANTOM5:113.4 Scaled Tags Per Million
Pig:65.5 nTPM
Mouse:43.0 nTPM
Allen mouse:1.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035305Antibody CAB010886
Glial cells LowMedium
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 84.7
2288 Male, age 75, left hemisphere 116.1
2481 Female, age 94, left hemisphere 113.0
2846 Female, age 79, unknown 88.2
1854 Male, age 80, left hemisphere 81.8
1781 Male, age 74, unknown 80.8
2289 Male, age 61, right hemisphere 74.5
2290 Female, age 72, unknown 67.2
1857 Female, age 85, left hemisphere 56.2
Globus pallidus, externus
nTPM: 255.5
1996 Male, age 80, right hemisphere 285.7
2772 Female, age 79, unknown 278.6
2567 Female, age 72, unknown 271.0
2395 Male, age 75, both hemispheres 221.1
2646 Male, age 61, right hemisphere 221.0
Globus pallidus, internus
nTPM: 244.1
2111 Female, age 85, right hemisphere 333.6
2778 Female, age 91, both hemispheres 275.0
2566 Female, age 72, unknown 252.9
2287 Male, age 75, right hemisphere 250.2
2037 Male, age 80, right hemisphere 238.5
1818 Male, age 74, unknown 203.7
2483 Female, age 94, right hemisphere 155.0
Nucleus accumbens
nTPM: 96.8
2391 Female, age 94, left hemisphere 162.6
2732 Male, age 80, right hemisphere 122.6
2698 Female, age 72, unknown 119.5
2286 Male, age 75, left hemisphere 103.8
1806 Female, age 85, left hemisphere 82.1
1783 Male, age 74, unknown 71.0
2824 Male, age 61, right hemisphere 63.2
1856 Female, age 91, right hemisphere 49.7
Nucleus basalis of Meynert
nTPM: 119.8
2569 Male, age 61, both hemispheres 201.3
2821 Male, age 75, both hemispheres 102.3
2393 Male, age 80, right hemisphere 91.2
2484 Female, age 94, left hemisphere 84.2
Nucleus of the diagonal band
nTPM: 44.5
1812 Female, age 91, both hemispheres 65.5
1979 Male, age 74, unknown 48.5
2029 Male, age 61, right hemisphere 39.7
2195 Female, age 85, both hemispheres 35.1
2775 Male, age 80, right hemisphere 33.9
Putamen
nTPM: 103.3
2489 Female, age 72, unknown 137.9
2647 Male, age 75, left hemisphere 132.0
2482 Female, age 94, left hemisphere 116.4
1829 Male, age 74, unknown 110.1
2466 Female, age 79, unknown 88.5
1937 Female, age 91, right hemisphere 84.5
1838 Male, age 80, right hemisphere 53.4
Septal nuclei
nTPM: 62.1
2394 Male, age 61, left hemisphere 100.6
2059 Female, age 85, both hemispheres 75.9
2199 Male, age 80, right hemisphere 70.9
2629 Female, age 94, right hemisphere 58.0
2009 Female, age 91, both hemispheres 53.8
2031 Female, age 72, unknown 41.0
1960 Male, age 74, unknown 34.8
Stria terminalis, bed nucleus
nTPM: 51.2
1974 Female, age 91, both hemispheres 62.5
2201 Male, age 74, unknown 47.8
2486 Female, age 94, both hemispheres 43.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 61.2
Samples: 246

Max nTPM: 178.2
Min nTPM: 14.4
Std nTPM: 25.9
Median nTPM: 56.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 178.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 151.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 145.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 139.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 127.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 126.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 122.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 121.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 113.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 112.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 110.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 109.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 108.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 108.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 107.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 106.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 99.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 98.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 98.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 97.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 97.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 97.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 97.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 97.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 97.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 96.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 95.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 93.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 93.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 92.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 91.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 91.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 91.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 90.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 89.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 88.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 87.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 86.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 86.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 84.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 84.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 83.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 83.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 83.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 83.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 83.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 81.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 81.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 80.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 79.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 79.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 78.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 77.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 77.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 77.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 75.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 75.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 74.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 74.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 74.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 73.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 73.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 73.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 73.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 72.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 71.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 71.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 71.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 71.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 70.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 70.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 69.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 69.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 68.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 68.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 68.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 67.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 67.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 66.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 66.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 65.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 65.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 65.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 65.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 63.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 63.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 63.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 62.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 62.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 62.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 61.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 61.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 60.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 60.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 59.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 59.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 58.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 58.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 58.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 58.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 58.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 58.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 58.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 57.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 57.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 57.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 56.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 55.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 55.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 55.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 54.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 54.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 54.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 54.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 53.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 53.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 52.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 52.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 51.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 51.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 51.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 51.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 51.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 51.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 51.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 50.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 50.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 50.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 49.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 48.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 48.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 48.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 48.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 47.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 47.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 47.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 47.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 47.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 46.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 45.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 45.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 45.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 44.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 44.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 44.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 44.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 44.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 44.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 44.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 44.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 43.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 43.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 43.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 43.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 41.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 41.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 40.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 40.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 40.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 40.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 40.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 39.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 39.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 39.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 39.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 39.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 38.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 38.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 38.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 38.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 37.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 37.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 37.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 37.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 36.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 36.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 35.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 35.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 35.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 35.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 35.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 35.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 35.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 35.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 34.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 33.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 33.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 32.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 32.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 32.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 32.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 31.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 31.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 31.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 31.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 31.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 30.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 28.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 28.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 27.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 27.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 26.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 26.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 26.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 26.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 25.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 24.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 23.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 21.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 18.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 14.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 45.6
Samples: 246

Max nTPM: 268.5
Min nTPM: 10.9
Std nTPM: 31.5
Median nTPM: 36.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 268.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 195.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 192.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 178.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 153.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 145.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 124.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 123.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 122.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 105.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 99.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 94.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 90.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 90.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 89.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 87.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 86.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 84.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 80.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 79.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 79.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 79.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 79.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 78.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 78.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 77.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 77.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 75.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 74.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 73.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 72.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 72.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 71.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 70.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 68.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 68.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 67.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 65.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 65.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 65.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 64.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 64.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 63.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 63.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 62.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 62.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 62.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 62.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 61.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 61.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 61.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 59.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 59.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 58.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 58.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 57.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 57.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 56.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 55.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 55.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 55.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 54.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 54.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 53.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 52.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 52.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 52.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 51.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 51.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 50.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 50.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 50.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 49.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 49.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 48.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 48.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 47.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 47.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 47.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 47.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 46.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 46.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 46.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 46.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 45.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 45.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 44.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 44.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 43.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 43.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 43.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 43.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 43.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 42.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 42.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 42.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 42.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 41.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 41.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 41.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 41.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 41.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 41.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 41.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 40.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 40.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 40.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 40.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 39.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 39.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 39.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 39.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 39.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 39.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 38.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 38.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 38.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 37.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 37.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 37.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 36.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 36.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 36.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 36.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 36.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 36.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 35.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 34.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 34.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 34.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 34.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 33.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 33.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 33.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 33.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 33.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 33.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 33.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 33.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 32.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 32.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 32.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 32.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 32.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 31.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 31.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 31.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 30.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 30.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 30.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 30.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 30.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 30.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 30.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 30.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 29.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 29.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 29.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 29.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 29.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 29.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 28.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 28.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 28.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 28.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 28.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 28.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 28.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 28.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 27.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 27.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 27.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 27.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 27.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 27.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 27.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 27.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 27.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 26.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 26.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 26.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 26.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 26.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 26.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 26.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 25.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 25.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 25.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 25.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 25.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 25.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 25.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 25.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 25.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 25.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 25.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 25.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 25.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 24.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 24.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 24.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 23.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 23.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 23.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 23.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 23.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 23.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 23.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 23.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 22.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 22.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 22.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 21.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 21.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 21.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 21.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 21.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 20.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 20.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 20.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 20.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 19.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 19.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 19.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 19.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 19.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 19.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 18.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 18.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 18.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 18.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 18.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 17.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 17.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 17.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 17.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 16.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 15.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 13.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 11.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 10.9
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Brain - Putamen (basal ganglia)
Average nTPM: 94.5
Samples: 205

Max nTPM: 306.8
Min nTPM: 29.1
Std nTPM: 40.2
Median nTPM: 89.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 306.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 231.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 215.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 193.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 193.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 188.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 185.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 184.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 182.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 180.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 177.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 173.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 170.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 169.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 149.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 148.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 147.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 146.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 146.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 145.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 145.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 144.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 140.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 136.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 135.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 135.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 132.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 132.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 132.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 130.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 129.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 128.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 128.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 125.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 125.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 124.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 124.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 123.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 122.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 120.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 120.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 120.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 119.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 118.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 118.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 118.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 115.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 114.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 114.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 112.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 111.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 111.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 111.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 111.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 110.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 109.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 109.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 108.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 107.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 107.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 107.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 107.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 107.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 106.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 106.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 103.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 103.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 103.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 102.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 102.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 102.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 102.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 101.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 101.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 100.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 100.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 100.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 100.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 100.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 100.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 99.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 99.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 98.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 98.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 97.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 95.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 95.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 95.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 94.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 93.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 93.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 92.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 92.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 92.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 92.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 92.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 91.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 91.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 90.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 90.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 90.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 90.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 89.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 88.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 88.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 88.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 88.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 88.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 88.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 87.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 87.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 86.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 86.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 86.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 85.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 85.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 84.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 84.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 83.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 82.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 82.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 82.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 82.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 82.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 81.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 80.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 80.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 80.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 79.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 78.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 76.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 76.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 76.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 75.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 75.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 75.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 73.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 73.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 72.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 72.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 72.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 72.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 72.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 72.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 71.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 69.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 68.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 67.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 66.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 66.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 66.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 65.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 65.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 65.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 65.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 64.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 63.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 62.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 61.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 61.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 61.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 61.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 61.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 60.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 60.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 60.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 58.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 58.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 57.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 56.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 54.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 54.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 54.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 53.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 52.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 52.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 52.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 52.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 49.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 48.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 48.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 47.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 46.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 46.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 45.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 45.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 45.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 44.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 44.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 43.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 43.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 41.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 39.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 36.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 34.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 34.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 33.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 32.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 29.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

113.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 30.6
FF:10164-103B2 76 years, female 30.6
Nucleus accumbens
Scaled Tags Per Million: 58.6
FF:10037-101F1 23-56 years, mixed 58.6
Putamen
Scaled Tags Per Million: 37.7
FF:10176-103C5 60 years, female 37.7
Globus pallidus
Scaled Tags Per Million: 113.4
FF:10161-103A8 76 years, female 120.9
FF:10175-103C4 60 years, female 105.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
Pig sample Sample description nTPM
Caudate
nTPM: 49.4
Samples: 4

Max nTPM: 55.3
Min nTPM: 38.4
Sample A Female 38.4
Sample B Female 50.8
Sample C Male 55.3
Sample D Male 53.0
Putamen
nTPM: 65.5
Samples: 4

Max nTPM: 80.6
Min nTPM: 48.8
Sample A Female 80.6
Sample B Female 48.8
Sample C Male 56.6
Sample D Male 75.8
Septum
nTPM: 50.7
Samples: 4

Max nTPM: 67.1
Min nTPM: 36.6
Sample A Female 48.6
Sample B Female 50.3
Sample C Male 36.6
Sample D Male 67.1
Ventral pallidum
nTPM: 62.7
Samples: 4

Max nTPM: 85.6
Min nTPM: 43.8
Sample A Female 43.8
Sample B Female 55.5
Sample C Male 65.9
Sample D Male 85.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 43.0
Samples: 4

Max nTPM: 45.5
Min nTPM: 40.2
Sample A Male 44.4
Sample B Male 45.5
Sample C Female 40.2
Sample D Female 42.0
Septum
nTPM: 39.5
Samples: 4

Max nTPM: 44.8
Min nTPM: 29.8
Sample A Male 29.8
Sample B Male 43.5
Sample C Female 39.8
Sample D Female 44.8
Ventral forebrain
nTPM: 28.3
Samples: 4

Max nTPM: 31.4
Min nTPM: 24.6
Sample A Male 29.9
Sample B Male 31.4
Sample C Female 24.6
Sample D Female 27.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.9
100145368 Antisense, RP_110519_03_D04, Mouse strain C57BL/6J (56 days, male) 1.7
445 Antisense, RP_Baylor_102780, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 1.0
100145368 Antisense, RP_110519_03_D04, Mouse strain C57BL/6J (56 days, male) 1.9
445 Antisense, RP_Baylor_102780, Mouse strain C57BL/6J (56 days, male) 0.0

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