We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RHOA
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RHOA
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:264.9 nTPM
GTEx:264.9 nTPM
FANTOM5:647.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB005052
Squamous epithelial cells Not detected


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

264.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 264.9
Samples: 156

Max nTPM: 450.5
Min nTPM: 142.9
Std nTPM: 56.2
Median nTPM: 259.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 450.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 419.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 408.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 407.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 397.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 385.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 384.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 379.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 367.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 352.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 351.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 349.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 345.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 343.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 336.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 332.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 331.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 327.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 326.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 325.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 319.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 318.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 318.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 317.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 317.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 316.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 314.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 313.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 310.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 309.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 309.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 307.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 306.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 306.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 305.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 305.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 304.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 303.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 302.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 300.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 298.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 297.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 297.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 297.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 296.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 296.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 295.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 290.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 290.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 287.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 287.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 285.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 285.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 284.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 282.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 282.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 281.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 279.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 278.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 278.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 277.2
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 274.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 273.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 273.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 273.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 272.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 272.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 272.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 271.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 271.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 271.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 270.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 269.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 268.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 266.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 264.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 262.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 260.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 258.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 255.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 255.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 255.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 254.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 254.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 252.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 248.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 248.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 247.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 245.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 245.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 244.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 243.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 243.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 242.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 242.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 241.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 241.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 240.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 240.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 240.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 239.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 238.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 238.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 237.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 237.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 234.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 233.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 233.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 232.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 231.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 231.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 230.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 230.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 229.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 228.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 228.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 226.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 224.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 223.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 221.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 221.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 221.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 218.4
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 217.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 216.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 214.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 214.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 211.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 211.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 210.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 209.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 209.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 206.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 205.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 205.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 204.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 204.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 202.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 201.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 200.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 197.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 196.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 193.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 193.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 193.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 191.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 189.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 188.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 187.4
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 185.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 174.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 174.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 170.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 169.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 143.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 142.9
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

647.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 647.0
FF:10204-103F6 68 years, female 647.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org