HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:61.9 nTPM
HPA Brain:153.8 nTPM
GTEx:61.9 nTPM
FANTOM5:48.2 Scaled Tags Per Million
Pig:39.4 nTPM
Mouse:64.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004231
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 153.8
Sample id Sample description nTPM
Hippocampus
nTPM: 153.8
2529 Female, age 94, left hemisphere 207.9
1855 Male, age 76, left hemisphere 160.9
2148 Female, age 91, left hemisphere 158.7
1911 Female, age 85, right hemisphere 147.4
1898 Male, age 80, left hemisphere 143.5
2621 Female, age 67, right hemisphere 104.4
Dentate gyrus
nTPM: 127.5
2528 Male, age 74, both hemispheres 189.0
2246 Female, age 85, both hemispheres 146.5
2531 Female, age 67, both hemispheres 114.8
2530 Female, age 94, left hemisphere 107.3
2010 Male, age 76, both hemispheres 106.2
1927 Female, age 91, both hemispheres 101.0
Entorhinal gyrus
nTPM: 131.3
2117 Female, age 91, right hemisphere 154.4
2686 Male, age 75, right hemisphere 137.8
2764 Male, age 80, right hemisphere 137.1
1787 Male, age 76, left hemisphere 130.9
1938 Female, age 85, left hemisphere 126.1
2613 Female, age 94, left hemisphere 101.8
Hippocampus, CA1
nTPM: 133.7
2527 Male, age 74, both hemispheres 205.7
1873 Female, age 85, both hemispheres 161.2
2082 Female, age 91, right hemisphere 146.9
2045 Male, age 76, both hemispheres 84.9
2749 Male, age 80, left hemisphere 70.0
Hippocampus, CA2
nTPM: 122.3
2113 Female, age 91, right hemisphere 151.4
1963 Male, age 80, left hemisphere 137.6
2249 Male, age 74, both hemispheres 127.4
2437 Female, age 94, left hemisphere 126.0
1940 Female, age 85, left hemisphere 112.2
1892 Male, age 76, both hemispheres 79.5
Hippocampus, CA3
nTPM: 122.3
2861 Female, age 67, both hemispheres 195.3
1891 Female, age 85, both hemispheres 147.9
2436 Male, age 74, both hemispheres 125.2
2620 Female, age 94, left hemisphere 112.0
2137 Male, age 80, left hemisphere 79.1
1867 Male, age 76, both hemispheres 74.5
Parahippocampal cortex
nTPM: 129.7
2692 Male, age 74, both hemispheres 202.1
2622 Female, age 67, right hemisphere 153.9
1933 Female, age 85, both hemispheres 144.6
2250 Female, age 67, right hemisphere 132.6
2245 Female, age 91, both hemispheres 120.0
1850 Male, age 80, both hemispheres 117.6
2018 Male, age 76, both hemispheres 116.6
1990 Female, age 91, right hemisphere 115.3
2693 Female, age 94, both hemispheres 101.4
2532 Female, age 72, left hemisphere 93.0
Perirhinal gyrus
nTPM: 108.8
1794 Male, age 80, right hemisphere 127.7
1847 Female, age 91, left hemisphere 120.8
2521 Female, age 94, right hemisphere 111.0
1841 Female, age 85, right hemisphere 104.4
2848 Male, age 76, right hemisphere 80.3
Subiculum
nTPM: 136.9
2619 Male, age 74, both hemispheres 210.0
2729 Female, age 91, right hemisphere 175.3
1977 Female, age 85, both hemispheres 123.0
2438 Female, age 94, left hemisphere 117.4
1901 Male, age 80, both hemispheres 100.2
2042 Male, age 76, both hemispheres 95.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 61.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.9
Samples: 197

Max nTPM: 183.8
Min nTPM: 9.8
Std nTPM: 33.6
Median nTPM: 55.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 183.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 173.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 171.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 152.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 146.5
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 145.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 141.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 134.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 132.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 129.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 129.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 48.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.2
FF:10153-102I9 76 years, female 66.3
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.4
Pig sample Sample description nTPM
Subiculum
nTPM: 35.9
Samples: 4

Max nTPM: 45.4
Min nTPM: 28.5
Sample A Female 45.4
Sample B Female 33.9
Sample C Male 35.7
Sample D Male 28.5
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 23.4
Min nTPM: 21.6
Sample A Female 23.0
Sample B Female 23.4
Sample C Male 22.4
Sample D Male 21.6
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 43.9
Min nTPM: 35.4
Sample A Female 36.9
Sample B Female 43.9
Sample C Male 41.3
Sample D Male 35.4
Ventral hippocampus
nTPM: 34.5
Samples: 4

Max nTPM: 50.0
Min nTPM: 25.9
Sample A Female 31.6
Sample B Female 30.5
Sample C Male 50.0
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 64.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.1
Samples: 4

Max nTPM: 73.9
Min nTPM: 54.3
Sample A Male 67.7
Sample B Male 54.3
Sample C Female 73.9
Sample D Female 60.3
Hippocampal formation
nTPM: 55.8
Samples: 4

Max nTPM: 67.6
Min nTPM: 45.7
Sample A Male 59.5
Sample B Male 50.2
Sample C Female 45.7
Sample D Female 67.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
100146154 Antisense, RP_110421_02_D11, Mouse strain C57BL/6J (56 days, male) 1.6
448 Antisense, RP_Baylor_102781, Mouse strain C57BL/6J (56 days, male) 0.1

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