PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:180.4 nTPM
FANTOM5:375.5 Scaled Tags Per Million
Pig:294.2 nTPM
Mouse:245.3 nTPM
Allen mouse:8.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 180.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 134.0
2301 Female, age 85, both hemispheres 167.8
2188 Female, age 91, both hemispheres 142.5
2090 Male, age 80, both hemispheres 133.8
1984 Male, age 76, both hemispheres 91.9
Area postrema
nTPM: 105.0
2306 Male, age 80, both hemispheres 138.9
2799 Male, age 61, both hemispheres 102.7
2054 Male, age 76, both hemispheres 73.5
Dorsal cochlear nucleus
nTPM: 114.9
2187 Female, age 91, both hemispheres 138.7
2802 Male, age 74, right hemisphere 124.4
2378 Male, age 80, both hemispheres 121.9
2058 Male, age 76, both hemispheres 96.2
2370 Male, age 61, both hemispheres 93.3
Dorsal medullary reticular nucleus
nTPM: 112.0
2373 Male, age 61, both hemispheres 119.3
2040 Female, age 85, both hemispheres 108.5
2088 Male, age 76, both hemispheres 108.3
Dorsal motor vagal complex
nTPM: 87.7
2185 Male, age 76, both hemispheres 125.1
2797 Male, age 61, both hemispheres 98.6
2000 Male, age 74, unknown 89.2
2643 Male, age 74, both hemispheres 87.7
2844 Male, age 55, unknown 78.9
2133 Female, age 91, both hemispheres 78.6
2813 Female, age 72, unknown 73.6
2807 Female, age 85, both hemispheres 70.3
Dorsal tegmental nucleus
nTPM: 100.1
2083 Male, age 80, both hemispheres 132.5
2326 Male, age 74, both hemispheres 101.9
1936 Male, age 76, left hemisphere 87.0
2358 Male, age 61, both hemispheres 78.8
Dorsolateral tegmental area
nTPM: 103.9
2751 Female, age 85, both hemispheres 143.9
2654 Male, age 80, both hemispheres 125.6
2337 Male, age 61, both hemispheres 119.0
2360 Male, age 74, both hemispheres 72.0
2141 Male, age 76, both hemispheres 59.2
Gigantocellular reticular nuclei, medullary
nTPM: 119.5
2314 Male, age 61, both hemispheres 189.3
2387 Female, age 91, both hemispheres 130.3
1876 Female, age 85, both hemispheres 118.8
2310 Male, age 80, both hemispheres 108.6
2022 Male, age 76, right hemisphere 87.4
2462 Male, age 74, both hemispheres 82.7
Gigantocellular reticular nuclei, pars
nTPM: 108.5
2168 Male, age 76, both hemispheres 116.2
2330 Male, age 80, both hemispheres 114.3
2706 Male, age 80, both hemispheres 112.1
2336 Male, age 61, both hemispheres 108.0
2084 Female, age 85, both hemispheres 92.0
Inferior olive
nTPM: 138.7
2178 Male, age 61, both hemispheres 163.4
2628 Female, age 91, both hemispheres 147.8
2563 Male, age 74, both hemispheres 136.9
2085 Female, age 85, both hemispheres 124.1
2379 Male, age 80, both hemispheres 121.3
Kolliker-Fuse nucleus
nTPM: 120.9
2793 Female, age 91, left hemisphere 170.3
2163 Male, age 80, both hemispheres 104.2
2315 Male, age 76, right hemisphere 88.3
Lateral lemniscal nuclei
nTPM: 115.2
2320 Female, age 91, left hemisphere 127.2
2169 Male, age 76, both hemispheres 123.1
2036 Male, age 80, both hemispheres 123.0
2746 Female, age 85, left hemisphere 112.1
2453 Male, age 74, right hemisphere 90.4
Lateral medullary reticular nucleus
nTPM: 150.2
2852 Male, age 80, both hemispheres 195.0
2305 Male, age 74, both hemispheres 159.5
2374 Male, age 61, both hemispheres 153.6
2044 Male, age 76, both hemispheres 135.7
2804 Female, age 91, both hemispheres 131.3
2190 Female, age 85, both hemispheres 126.2
Lateral parabrachial nucleus
nTPM: 130.9
2792 Male, age 76, both hemispheres 175.3
2013 Male, age 80, both hemispheres 132.8
2790 Male, age 61, both hemispheres 112.6
2139 Female, age 85, right hemisphere 102.7
Lateral vestibular nucleus
nTPM: 123.3
2311 Male, age 80, both hemispheres 142.8
2184 Male, age 76, both hemispheres 103.7
Locus coeruleus
nTPM: 62.5
2720 Male, age 74, both hemispheres 76.0
2162 Male, age 80, both hemispheres 75.0
2317 Female, age 72, unknown 66.1
2123 Female, age 91, both hemispheres 62.0
2014 Male, age 55, unknown 55.6
2788 Male, age 74, unknown 52.8
1980 Male, age 76, both hemispheres 50.2
Medial olivary nucleus
nTPM: 165.4
1943 Male, age 61, both hemispheres 199.0
1962 Male, age 76, both hemispheres 188.1
2851 Male, age 80, both hemispheres 145.1
2138 Female, age 91, both hemispheres 129.2
Medial parabrachial nucleus
nTPM: 126.2
2170 Female, age 91, both hemispheres 167.4
2854 Male, age 80, both hemispheres 133.3
2463 Female, age 85, right hemisphere 132.9
2786 Male, age 76, both hemispheres 100.3
2156 Male, age 61, both hemispheres 97.0
Medial periolivary nuclei
nTPM: 112.2
2081 Male, age 80, both hemispheres 127.9
2063 Male, age 76, both hemispheres 122.4
2791 Male, age 74, right hemisphere 110.3
2458 Female, age 91, both hemispheres 106.9
2171 Female, age 85, both hemispheres 93.4
Medial vestibular nucleus
nTPM: 121.1
2801 Male, age 74, both hemispheres 168.5
2803 Female, age 91, both hemispheres 140.6
2624 Male, age 61, both hemispheres 130.0
2093 Male, age 80, both hemispheres 122.4
2743 Female, age 85, both hemispheres 102.2
2134 Male, age 76, both hemispheres 62.6
Motor facial nucleus
nTPM: 116.4
2126 Male, age 61, both hemispheres 128.2
2697 Female, age 85, both hemispheres 128.1
2365 Male, age 74, right hemisphere 120.6
2062 Male, age 76, both hemispheres 116.5
2795 Female, age 91, both hemispheres 108.5
2327 Male, age 80, both hemispheres 96.4
Motor hypoglossal nucleus
nTPM: 104.3
2182 Male, age 80, both hemispheres 148.4
2125 Female, age 91, both hemispheres 138.9
2132 Female, age 85, both hemispheres 119.0
2461 Male, age 61, both hemispheres 64.6
2277 Male, age 76, both hemispheres 50.7
Motor trigeminal nucleus
nTPM: 105.2
2321 Female, age 91, both hemispheres 120.0
2560 Male, age 74, both hemispheres 116.1
2079 Male, age 80, both hemispheres 102.8
2309 Male, age 76, both hemispheres 94.0
2335 Male, age 61, both hemispheres 92.8
Nuclei of the trapezoid body
nTPM: 112.3
2166 Male, age 80, both hemispheres 123.9
2159 Male, age 61, both hemispheres 123.2
1983 Male, age 76, both hemispheres 120.8
2368 Female, age 91, both hemispheres 111.1
2735 Female, age 85, both hemispheres 82.5
Nucleus ambiguus
nTPM: 131.1
2071 Male, age 76, both hemispheres 162.5
2096 Female, age 85, both hemispheres 99.8
Nucleus cuneatus
nTPM: 138.3
2380 Male, age 80, both hemispheres 184.4
2381 Male, age 80, both hemispheres 164.1
2808 Female, age 85, both hemispheres 157.1
2376 Male, age 61, both hemispheres 148.7
2100 Male, age 76, both hemispheres 140.5
2564 Male, age 74, both hemispheres 125.5
2131 Male, age 76, both hemispheres 119.8
2805 Female, age 91, both hemispheres 113.3
2562 Male, age 61, both hemispheres 91.1
Nucleus gracilis
nTPM: 144.8
2382 Male, age 80, both hemispheres 190.2
2627 Male, age 74, both hemispheres 133.6
2299 Female, age 85, both hemispheres 110.7
Nucleus raphe magnus
nTPM: 109.3
2051 Male, age 76, both hemispheres 152.0
2328 Male, age 80, both hemispheres 117.5
2459 Female, age 91, both hemispheres 115.2
2455 Male, age 74, both hemispheres 98.5
2160 Male, age 61, both hemispheres 94.2
2172 Female, age 85, both hemispheres 78.6
Nucleus raphe obscurus
nTPM: 180.4
2845 Female, age 85, midline 194.8
2142 Male, age 76, midline 176.0
2800 Male, age 61, midline 170.5
Nucleus raphe pallidus
nTPM: 163.7
2145 Male, age 76, midline 189.8
1924 Male, age 61, midline 177.7
2183 Male, age 80, midline 123.5
Nucleus tractus solitarii
nTPM: 56.6
2656 Male, age 76, both hemispheres 64.1
2307 Male, age 80, both hemispheres 61.6
2191 Female, age 85, both hemispheres 56.3
2144 Female, age 91, right hemisphere 44.2
Paramedian reticular nucleus
nTPM: 102.8
2050 Female, age 85, both hemispheres 117.0
2057 Male, age 80, both hemispheres 114.2
2052 Male, age 76, both hemispheres 102.3
2313 Male, age 61, both hemispheres 77.6
Parvicellular reticular nuclei
nTPM: 112.5
2095 Male, age 76, both hemispheres 134.8
2119 Male, age 80, both hemispheres 119.0
2558 Male, age 74, both hemispheres 83.8
Parvicellular reticular nuclei, medullary
nTPM: 95.6
2189 Female, age 91, both hemispheres 105.3
2181 Male, age 80, left hemisphere 93.4
2091 Female, age 85, both hemispheres 88.1
Pedunculopontine tegmental nucleus
nTPM: 92.7
2338 Male, age 61, both hemispheres 101.0
2334 Male, age 80, both hemispheres 99.7
1921 Female, age 85, both hemispheres 77.3
Peritrigeminal nucleus
nTPM: 139.5
2136 Male, age 76, both hemispheres 145.4
2179 Male, age 61, both hemispheres 137.1
2067 Female, age 85, both hemispheres 136.2
Pontine nuclei
nTPM: 124.5
2109 Female, age 72, unknown 147.9
2454 Male, age 74, left hemisphere 138.7
1863 Male, age 55, unknown 137.8
2319 Female, age 91, both hemispheres 134.5
1968 Male, age 76, left hemisphere 126.2
2115 Male, age 80, left hemisphere 118.0
2787 Female, age 85, both hemispheres 97.2
2727 Male, age 61, right hemisphere 96.0
Pontine raphe nucleus
nTPM: 81.5
2122 Female, age 85, midline 84.5
2853 Male, age 76, midline 78.6
Posteroventral cochlear nucleus
nTPM: 122.8
2341 Male, age 80, both hemispheres 154.5
2135 Female, age 91, both hemispheres 137.9
2070 Male, age 76, both hemispheres 123.1
2371 Male, age 61, both hemispheres 114.3
2752 Female, age 85, both hemispheres 84.2
Prepositus hypoglossal nucleus
nTPM: 116.9
2855 Female, age 85, right hemisphere 151.6
2086 Male, age 80, both hemispheres 82.1
Principal sensory trigeminal nucleus
nTPM: 113.1
2367 Female, age 91, left hemisphere 152.3
2158 Male, age 61, both hemispheres 108.4
2324 Male, age 76, both hemispheres 97.2
2008 Male, age 80, left hemisphere 94.7
Reticular pontine nucleus, caudal
nTPM: 123.6
2559 Male, age 74, both hemispheres 136.8
2092 Male, age 76, both hemispheres 131.3
2457 Female, age 91, both hemispheres 125.3
2332 Male, age 80, right hemisphere 100.9
Reticular pontine nucleus, oral
nTPM: 121.3
2366 Female, age 91, both hemispheres 137.9
2361 Male, age 74, both hemispheres 127.9
1939 Male, age 80, both hemispheres 121.7
2012 Female, age 85, both hemispheres 110.9
2167 Male, age 76, both hemispheres 108.0
Reticulotegmental nucleus
nTPM: 107.4
2322 Female, age 91, both hemispheres 128.8
2333 Male, age 80, both hemispheres 109.5
2452 Male, age 74, both hemispheres 106.9
2325 Male, age 76, both hemispheres 84.5
Spinal trigeminal nucleus, caudal
nTPM: 124.1
2312 Male, age 61, both hemispheres 140.8
2447 Male, age 76, both hemispheres 132.6
2308 Male, age 80, both hemispheres 130.9
2390 Female, age 91, both hemispheres 109.8
2642 Male, age 74, both hemispheres 106.2
Spinal trigeminal nucleus, interpolar
nTPM: 103.2
2389 Female, age 91, both hemispheres 112.6
2033 Male, age 80, both hemispheres 111.1
2066 Male, age 76, right hemisphere 110.8
2386 Female, age 85, both hemispheres 96.4
2625 Male, age 61, both hemispheres 85.1
Spinal trigeminal nucleus, oral
nTPM: 96.8
2164 Male, age 80, both hemispheres 119.7
1978 Male, age 76, both hemispheres 91.5
2737 Female, age 85, both hemispheres 79.1
Spinal vestibular nucleus
nTPM: 114.5
2748 Male, age 76, both hemispheres 136.5
2806 Female, age 85, both hemispheres 124.1
2384 Male, age 74, both hemispheres 119.0
2186 Female, age 91, both hemispheres 115.5
2780 Male, age 80, both hemispheres 104.6
2796 Male, age 61, both hemispheres 87.3
Subcoeruleus area
nTPM: 106.2
2369 Female, age 85, left hemisphere 158.3
2089 Male, age 76, left hemisphere 109.2
1958 Male, age 80, both hemispheres 105.4
2451 Male, age 74, both hemispheres 84.3
2323 Female, age 91, left hemisphere 74.0
Superior olive
nTPM: 119.1
2020 Male, age 76, both hemispheres 133.3
2329 Male, age 80, right hemisphere 123.2
2364 Male, age 74, right hemisphere 120.2
2561 Female, age 91, both hemispheres 118.3
1875 Female, age 85, both hemispheres 100.7
Superior vestibular nucleus
nTPM: 104.3
2015 Male, age 80, both hemispheres 117.5
2061 Male, age 76, both hemispheres 99.7
2383 Male, age 74, both hemispheres 95.6
Ventral medullary reticular nucleus
nTPM: 134.9
2372 Male, age 61, both hemispheres 147.7
2060 Male, age 76, both hemispheres 122.2
Ventral periolivary nuclei
nTPM: 109.6
2023 Male, age 76, both hemispheres 147.2
2165 Male, age 80, both hemispheres 112.0
2794 Female, age 91, left hemisphere 91.4
2130 Female, age 85, both hemispheres 87.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 129.4
2118 Male, age 80, both hemispheres 141.1
2180 Male, age 61, both hemispheres 140.7
1986 Male, age 76, both hemispheres 139.1
2302 Female, age 91, both hemispheres 113.2
2741 Female, age 85, both hemispheres 112.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 115.0
1959 Male, age 76, both hemispheres 131.1
2161 Male, age 80, both hemispheres 122.4
2456 Female, age 91, both hemispheres 116.3
2840 Female, age 85, both hemispheres 115.1
2359 Male, age 61, both hemispheres 108.0
2449 Male, age 74, both hemispheres 96.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 375.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 299.4
FF:10182-103D2 60 years, female 301.9
FF:10165-103B3 76 years, female 296.9
Medulla oblongata
Scaled Tags Per Million: 321.1
FF:10038-101F2 18-64 years, mixed 432.8
FF:10155-103A2 76 years, female 283.3
FF:10174-103C3 60 years, female 247.1
Pons
Scaled Tags Per Million: 375.5
FF:10033-101E6 18-54 years, mixed 375.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 294.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 294.2
Samples: 4

Max nTPM: 334.2
Min nTPM: 216.7
Sample A Female 299.8
Sample B Female 216.7
Sample C Male 334.2
Sample D Male 326.1
Pons
nTPM: 220.6
Samples: 4

Max nTPM: 285.0
Min nTPM: 152.5
Sample A Female 229.2
Sample B Female 152.5
Sample C Male 215.5
Sample D Male 285.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 245.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 245.3
Samples: 4

Max nTPM: 271.2
Min nTPM: 219.0
Sample A Male 228.0
Sample B Male 219.0
Sample C Female 271.2
Sample D Female 263.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.5
75651224 Antisense, RP_060518_01_D02, Mouse strain C57BL/6J (56 days, male) 9.5
74990520 Antisense, RP_060410_01_C02, Mouse strain C57BL/6J (56 days, male) 7.6
Pons
Expression energy: 8.3
75651224 Antisense, RP_060518_01_D02, Mouse strain C57BL/6J (56 days, male) 9.9
74990520 Antisense, RP_060410_01_C02, Mouse strain C57BL/6J (56 days, male) 6.7

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