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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
479.0
nTPM
FANTOM5:
89.4
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
479.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 452.6
2188
Female, age 91, both hemispheres
578.1
2090
Male, age 80, both hemispheres
500.5
2301
Female, age 85, both hemispheres
409.5
1984
Male, age 76, both hemispheres
322.2
Dorsal cochlear nucleus nTPM: 423.5
2187
Female, age 91, both hemispheres
505.7
2802
Male, age 74, right hemisphere
486.9
2370
Male, age 61, both hemispheres
384.3
2378
Male, age 80, both hemispheres
380.7
2058
Male, age 76, both hemispheres
360.0
Dorsal tegmental nucleus nTPM: 470.5
2326
Male, age 74, both hemispheres
534.3
2083
Male, age 80, both hemispheres
504.3
2358
Male, age 61, both hemispheres
425.6
1936
Male, age 76, left hemisphere
417.8
Dorsolateral tegmental area nTPM: 457.4
2654
Male, age 80, both hemispheres
548.0
2337
Male, age 61, both hemispheres
543.7
2751
Female, age 85, both hemispheres
473.6
2360
Male, age 74, both hemispheres
375.5
2141
Male, age 76, both hemispheres
346.3
Kolliker-Fuse nucleus nTPM: 470.4
2315
Male, age 76, right hemisphere
497.8
2793
Female, age 91, left hemisphere
486.3
2163
Male, age 80, both hemispheres
427.1
Lateral lemniscal nuclei nTPM: 358.8
2169
Male, age 76, both hemispheres
406.9
2453
Male, age 74, right hemisphere
406.1
2320
Female, age 91, left hemisphere
377.9
2746
Female, age 85, left hemisphere
342.2
2036
Male, age 80, both hemispheres
261.2
Lateral parabrachial nucleus nTPM: 465.8
2792
Male, age 76, both hemispheres
564.7
2013
Male, age 80, both hemispheres
485.6
2139
Female, age 85, right hemisphere
424.1
2790
Male, age 61, both hemispheres
388.9
Lateral vestibular nucleus nTPM: 429.4
2311
Male, age 80, both hemispheres
498.2
2184
Male, age 76, both hemispheres
360.6
Locus coeruleus nTPM: 388.2
2720
Male, age 74, both hemispheres
472.2
2123
Female, age 91, both hemispheres
433.1
2162
Male, age 80, both hemispheres
400.9
2317
Female, age 72, unknown
394.2
2014
Male, age 55, unknown
376.5
2788
Male, age 74, unknown
330.7
1980
Male, age 76, both hemispheres
309.4
Medial parabrachial nucleus nTPM: 462.2
2170
Female, age 91, both hemispheres
602.1
2463
Female, age 85, right hemisphere
463.8
2156
Male, age 61, both hemispheres
459.9
2854
Male, age 80, both hemispheres
398.9
2786
Male, age 76, both hemispheres
386.2
Medial periolivary nuclei nTPM: 400.5
2063
Male, age 76, both hemispheres
459.1
2791
Male, age 74, right hemisphere
423.8
2081
Male, age 80, both hemispheres
405.8
2458
Female, age 91, both hemispheres
390.9
2171
Female, age 85, both hemispheres
322.7
Motor facial nucleus nTPM: 400.6
2126
Male, age 61, both hemispheres
456.9
2795
Female, age 91, both hemispheres
439.8
2365
Male, age 74, right hemisphere
425.6
2062
Male, age 76, both hemispheres
417.3
2697
Female, age 85, both hemispheres
372.6
2327
Male, age 80, both hemispheres
291.3
Motor trigeminal nucleus nTPM: 409.1
2309
Male, age 76, both hemispheres
438.4
2560
Male, age 74, both hemispheres
420.3
2321
Female, age 91, both hemispheres
406.7
2335
Male, age 61, both hemispheres
399.9
2079
Male, age 80, both hemispheres
380.4
Nuclei of the trapezoid body nTPM: 394.4
1983
Male, age 76, both hemispheres
533.8
2166
Male, age 80, both hemispheres
378.8
2159
Male, age 61, both hemispheres
370.3
2368
Female, age 91, both hemispheres
360.4
2735
Female, age 85, both hemispheres
328.6
Nucleus raphe magnus nTPM: 362.3
2455
Male, age 74, both hemispheres
420.2
2051
Male, age 76, both hemispheres
368.5
2160
Male, age 61, both hemispheres
366.2
2328
Male, age 80, both hemispheres
356.1
2459
Female, age 91, both hemispheres
342.2
2172
Female, age 85, both hemispheres
320.7
Paramedian reticular nucleus nTPM: 425.8
2313
Male, age 61, both hemispheres
435.6
2050
Female, age 85, both hemispheres
430.3
2057
Male, age 80, both hemispheres
427.8
2052
Male, age 76, both hemispheres
409.7
Pedunculopontine tegmental nucleus nTPM: 454.3
2338
Male, age 61, both hemispheres
521.0
2334
Male, age 80, both hemispheres
464.6
1921
Female, age 85, both hemispheres
377.3
Pontine nuclei nTPM: 423.5
2319
Female, age 91, both hemispheres
504.5
1863
Male, age 55, unknown
492.2
2787
Female, age 85, both hemispheres
435.2
2454
Male, age 74, left hemisphere
430.2
2109
Female, age 72, unknown
400.0
1968
Male, age 76, left hemisphere
385.6
2115
Male, age 80, left hemisphere
377.7
2727
Male, age 61, right hemisphere
363.0
Pontine raphe nucleus nTPM: 404.2
2853
Male, age 76, midline
406.4
2122
Female, age 85, midline
401.9
Posteroventral cochlear nucleus nTPM: 479.0
2135
Female, age 91, both hemispheres
595.3
2341
Male, age 80, both hemispheres
583.4
2752
Female, age 85, both hemispheres
453.6
2371
Male, age 61, both hemispheres
401.0
2070
Male, age 76, both hemispheres
361.7
Principal sensory trigeminal nucleus nTPM: 363.3
2367
Female, age 91, left hemisphere
426.7
2324
Male, age 76, both hemispheres
356.9
2008
Male, age 80, left hemisphere
356.5
2158
Male, age 61, both hemispheres
313.0
Reticular pontine nucleus, caudal nTPM: 439.8
2559
Male, age 74, both hemispheres
562.2
2092
Male, age 76, both hemispheres
493.1
2457
Female, age 91, both hemispheres
430.3
2332
Male, age 80, right hemisphere
273.6
Reticular pontine nucleus, oral nTPM: 447.9
2366
Female, age 91, both hemispheres
562.8
1939
Male, age 80, both hemispheres
476.4
2167
Male, age 76, both hemispheres
423.1
2361
Male, age 74, both hemispheres
409.8
2012
Female, age 85, both hemispheres
367.7
Reticulotegmental nucleus nTPM: 441.6
2452
Male, age 74, both hemispheres
478.0
2322
Female, age 91, both hemispheres
447.3
2325
Male, age 76, both hemispheres
429.0
2333
Male, age 80, both hemispheres
412.3
Spinal trigeminal nucleus, oral nTPM: 375.6
2164
Male, age 80, both hemispheres
388.7
1978
Male, age 76, both hemispheres
382.5
2737
Female, age 85, both hemispheres
355.6
Subcoeruleus area nTPM: 451.8
2451
Male, age 74, both hemispheres
559.8
2369
Female, age 85, left hemisphere
481.0
1958
Male, age 80, both hemispheres
447.4
2323
Female, age 91, left hemisphere
425.4
2089
Male, age 76, left hemisphere
345.2
Superior olive nTPM: 394.4
2020
Male, age 76, both hemispheres
522.4
1875
Female, age 85, both hemispheres
391.8
2561
Female, age 91, both hemispheres
383.8
2364
Male, age 74, right hemisphere
355.8
2329
Male, age 80, right hemisphere
318.3
Ventral periolivary nuclei nTPM: 418.8
2023
Male, age 76, both hemispheres
531.1
2794
Female, age 91, left hemisphere
435.5
2165
Male, age 80, both hemispheres
405.0
2130
Female, age 85, both hemispheres
303.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 384.5
1959
Male, age 76, both hemispheres
433.4
2359
Male, age 61, both hemispheres
411.4
2161
Male, age 80, both hemispheres
398.0
2449
Male, age 74, both hemispheres
361.0
2840
Female, age 85, both hemispheres
356.0
2456
Female, age 91, both hemispheres
347.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
