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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:615.9 nTPM
GTEx:615.9 nTPM
FANTOM5:68.3 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

615.9
GTEx sample id Sample description nTPM
Retina
Average nTPM: 615.9
Samples: 105

Max nTPM: 867.4
Min nTPM: 401.5
Std nTPM: 93.1
Median nTPM:
379_1 60 years, male 867.4
384_1 83 years, male 847.1
375_1 74 years, female 792.1
321_1 62 years, female 779.5
376_1 75 years, female 777.4
237_1 82 years, male 775.9
389_1 86 years, female 766.5
35_1 74 years, female 765.0
322_1 76 years, male 759.1
246_1 77 years, male 758.3
120_1 70 years, female 740.4
452_1 88 years, female 735.9
153_1 70 years, female 735.8
307_1 66 years, female 729.9
173_1 67 years, male 728.3
320_1 89 years, female 725.5
377_1 82 years, female 716.9
347_1 72 years, male 710.3
145_1 84 years, male 707.3
396_1 62 years, male 701.5
4_1 88 years, female 701.1
17_1 71 years, male 698.7
526_1 61 years, male 695.3
495_1 57 years, female 687.8
394_1 75 years, female 687.6
189_1 76 years, male 686.9
2_1 77 years, female 679.4
137_1 83 years, male 675.7
386_1 76 years, male 664.9
315_1 62 years, female 663.8
319_1 81 years, male 662.9
126_1 63 years, male 662.2
308_1 70 years, female 662.2
447_1 81 years, male 659.6
311_1 78 years, male 655.2
404_1 82 years, female 649.4
218_1 71 years, female 643.9
499_1 55 years, female 643.5
265_1 87 years, male 642.2
109_1 81 years, female 641.7
266_1 85 years, male 637.9
139_1 64 years, female 636.6
501_1 88 years, male 628.8
177_1 74 years, male 623.9
518_1 75 years, female 619.2
229_1 69 years, female 618.9
314_1 67 years, male 618.4
355_1 70 years, female 615.7
119_1 70 years, female 614.9
254_1 77 years, female 613.8
405_1 91 years, male 613.5
42_1 85 years, male 612.2
317_1 60 years, male 610.0
348_1 84 years, male 607.9
6_1 73 years, female 603.5
288_1 66 years, female 602.3
243_1 75 years, male 602.2
316_1 62 years, male 599.5
217_1 76 years, male 599.4
18_1 88 years, male 592.8
295_1 61 years, female 590.3
351_1 91 years, male 589.8
142_1 61 years, female 587.0
117_1 61 years, male 586.9
162_1 79 years, female 586.4
414_1 84 years, female 583.7
349_1 83 years, male 577.6
264_1 73 years, female 572.7
335_1 73 years, female 572.2
406_1 79 years, male 571.3
324_1 76 years, male 569.9
480_1 63 years, male 569.5
251_1 78 years, male 566.6
354_1 81 years, female 562.8
468_1 89 years, male 562.0
318_1 68 years, male 558.0
415_1 77 years, female 555.6
291_1 76 years, male 552.6
286_1 68 years, female 552.1
506_1 65 years, male 552.0
517_1 88 years, male 551.0
172_1 72 years, female 542.8
115_1 83 years, male 540.4
353_1 82 years, female 536.4
163_1 78 years, male 534.7
503_1 68 years, male 533.5
466_1 57 years, female 533.1
313_1 79 years, female 523.4
350_1 84 years, female 523.2
99_1 64 years, male 521.9
356_1 87 years, female 515.6
81_1 67 years, male 512.7
292_1 71 years, male 507.0
352_1 62 years, male 506.6
89_1 63 years, male 501.2
491_1 89 years, female 496.3
425_1 59 years, female 482.3
41_1 94 years, female 479.2
9_1 66 years, female 477.2
293_1 68 years, female 469.3
43_1 64 years, female 464.7
32_1 67 years, male 461.1
490_1 67 years, female 452.2
413_1 59 years, female 425.9
149_1 88 years, male 401.5
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 68.3
FF:10030-101E3 24-65 years, mixed 68.3

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