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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:90.3 nTPM
HPA Brain:86.8 nTPM
GTEx:90.3 nTPM
FANTOM5:129.0 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:43.0 nTPM
Allen mouse:17.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019006Antibody HPA020595
Glial cells MediumNot detected
Neuronal cells Not detectedHigh



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 55.3
2481 Female, age 94, left hemisphere 79.3
1854 Male, age 80, left hemisphere 62.8
2289 Male, age 61, right hemisphere 59.7
1857 Female, age 85, left hemisphere 58.5
2290 Female, age 72, unknown 53.6
2288 Male, age 75, left hemisphere 48.5
2846 Female, age 79, unknown 40.1
1781 Male, age 74, unknown 40.0
Globus pallidus, externus
nTPM: 86.8
2646 Male, age 61, right hemisphere 120.0
1996 Male, age 80, right hemisphere 101.9
2772 Female, age 79, unknown 79.1
2567 Female, age 72, unknown 67.4
2395 Male, age 75, both hemispheres 65.5
Globus pallidus, internus
nTPM: 74.2
2483 Female, age 94, right hemisphere 86.8
2037 Male, age 80, right hemisphere 83.7
1818 Male, age 74, unknown 82.3
2111 Female, age 85, right hemisphere 71.1
2287 Male, age 75, right hemisphere 68.0
2778 Female, age 91, both hemispheres 66.3
2566 Female, age 72, unknown 61.3
Nucleus accumbens
nTPM: 48.0
1806 Female, age 85, left hemisphere 56.0
2286 Male, age 75, left hemisphere 51.5
2391 Female, age 94, left hemisphere 50.7
2732 Male, age 80, right hemisphere 50.0
2698 Female, age 72, unknown 49.3
2824 Male, age 61, right hemisphere 43.1
1856 Female, age 91, right hemisphere 41.7
1783 Male, age 74, unknown 41.6
Nucleus basalis of Meynert
nTPM: 64.2
2569 Male, age 61, both hemispheres 100.7
2484 Female, age 94, left hemisphere 53.8
2393 Male, age 80, right hemisphere 51.7
2821 Male, age 75, both hemispheres 50.7
Nucleus of the diagonal band
nTPM: 43.0
1812 Female, age 91, both hemispheres 47.8
2775 Male, age 80, right hemisphere 47.7
1979 Male, age 74, unknown 43.3
2195 Female, age 85, both hemispheres 38.6
2029 Male, age 61, right hemisphere 37.5
Putamen
nTPM: 51.0
2482 Female, age 94, left hemisphere 65.4
2647 Male, age 75, left hemisphere 62.6
1829 Male, age 74, unknown 52.1
2489 Female, age 72, unknown 50.8
1838 Male, age 80, right hemisphere 44.7
2466 Female, age 79, unknown 40.8
1937 Female, age 91, right hemisphere 40.7
Septal nuclei
nTPM: 48.9
2199 Male, age 80, right hemisphere 66.6
2394 Male, age 61, left hemisphere 53.9
2629 Female, age 94, right hemisphere 49.4
2059 Female, age 85, both hemispheres 47.3
2009 Female, age 91, both hemispheres 46.0
1960 Male, age 74, unknown 39.9
2031 Female, age 72, unknown 38.9
Stria terminalis, bed nucleus
nTPM: 41.3
1974 Female, age 91, both hemispheres 43.4
2486 Female, age 94, both hemispheres 42.4
2201 Male, age 74, unknown 38.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 87.4
Samples: 246

Max nTPM: 209.1
Min nTPM: 36.7
Std nTPM: 25.8
Median nTPM: 82.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 209.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 187.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 184.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 148.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 144.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 143.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 142.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 142.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 138.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 136.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 134.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 134.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 133.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 132.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 130.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 130.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 128.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 128.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 127.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 127.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 125.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 124.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 124.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 122.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 121.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 121.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 120.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 119.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 118.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 118.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 117.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 115.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 114.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 113.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 113.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 112.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 111.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 111.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 111.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 110.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 110.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 108.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 108.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 108.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 108.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 107.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 107.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 107.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 106.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 105.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 105.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 105.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 103.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 103.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 102.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 102.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 101.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 100.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 100.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 100.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 99.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 99.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 99.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 99.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 99.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 98.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 98.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 97.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 97.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 97.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 96.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 96.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 95.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 95.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 95.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 94.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 94.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 94.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 94.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 93.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 93.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 93.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 92.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 92.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 92.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 92.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 92.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 92.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 91.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 91.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 91.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 91.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 90.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 90.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 89.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 89.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 89.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 89.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 89.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 89.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 89.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 88.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 88.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 88.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 88.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 87.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 87.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 87.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 87.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 86.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 86.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 86.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 86.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 85.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 85.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 84.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 83.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 83.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 82.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 82.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 82.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 81.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 81.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 81.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 80.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 80.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 79.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 79.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 79.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 79.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 78.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 77.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 77.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 77.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 77.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 77.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 77.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 76.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 76.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 76.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 76.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 76.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 76.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 76.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 76.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 75.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 75.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 75.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 75.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 75.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 74.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 74.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 74.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 74.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 74.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 73.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 73.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 73.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 73.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 73.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 73.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 72.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 72.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 72.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 72.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 72.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 72.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 71.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 71.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 71.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 70.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 70.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 70.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 70.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 70.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 70.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 70.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 69.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 69.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 68.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 68.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 67.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 67.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 67.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 67.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 66.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 65.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 64.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 64.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 64.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 64.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 64.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 63.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 63.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 62.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 62.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 62.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 61.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 61.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 60.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 60.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 59.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 58.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 58.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 56.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 56.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 56.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 56.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 55.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 55.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 54.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 53.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 52.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 51.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 51.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 50.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 49.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 49.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 49.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 47.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 46.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 37.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 36.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 79.2
Samples: 246

Max nTPM: 232.7
Min nTPM: 39.7
Std nTPM: 26.0
Median nTPM: 74.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 232.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 225.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 161.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 160.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 147.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 138.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 134.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 131.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 130.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 129.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 129.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 128.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 127.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 126.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 118.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 118.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 117.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 116.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 116.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 115.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 115.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 115.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 112.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 111.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 111.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 109.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 108.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 107.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 107.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 106.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 106.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 106.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 105.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 104.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 104.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 104.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 104.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 103.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 103.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 102.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 101.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 99.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 98.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 98.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 98.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 96.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 96.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 95.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 95.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 94.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 94.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 93.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 93.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 92.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 92.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 91.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 90.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 89.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 89.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 89.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 89.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 89.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 89.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 89.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 88.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 88.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 87.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 87.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 87.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 87.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 86.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 86.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 85.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 85.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 85.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 85.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 85.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 84.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 84.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 84.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 84.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 83.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 83.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 83.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 83.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 82.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 81.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 81.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 81.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 81.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 81.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 81.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 81.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 81.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 80.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 80.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 80.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 79.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 78.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 78.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 78.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 78.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 78.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 77.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 77.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 77.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 77.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 77.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 76.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 76.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 76.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 75.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 75.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 75.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 75.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 74.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 74.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 74.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 74.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 74.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 74.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 74.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 74.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 73.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 73.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 73.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 72.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 72.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 72.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 72.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 72.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 72.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 72.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 71.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 71.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 71.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 71.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 71.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 71.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 70.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 70.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 70.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 70.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 69.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 69.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 68.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 68.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 68.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 68.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 67.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 67.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 67.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 67.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 66.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 66.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 66.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 66.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 66.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 66.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 66.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 65.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 65.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 65.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 65.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 65.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 65.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 65.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 64.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 64.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 63.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 63.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 63.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 63.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 63.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 63.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 63.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 62.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 62.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 62.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 62.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 61.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 61.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 61.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 61.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 61.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 61.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 60.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 60.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 60.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 60.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 60.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 60.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 60.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 60.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 60.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 59.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 59.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 59.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 58.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 58.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 58.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 58.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 58.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 58.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 58.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 58.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 58.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 57.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 57.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 56.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 56.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 55.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 55.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 55.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 55.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 54.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 54.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 54.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 53.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 53.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 53.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 53.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 52.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 52.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 52.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 51.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 51.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 50.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 50.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 50.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 49.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 49.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 49.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 48.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 48.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 47.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 47.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 46.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 46.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 46.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 46.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 43.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 41.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 39.7
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Brain - Putamen (basal ganglia)
Average nTPM: 90.3
Samples: 205

Max nTPM: 257.0
Min nTPM: 36.0
Std nTPM: 29.4
Median nTPM: 87.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 257.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 193.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 173.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 163.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 160.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 154.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 152.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 149.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 143.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 141.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 140.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 140.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 138.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 133.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 131.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 131.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 128.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 128.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 126.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 125.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 124.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 123.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 123.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 122.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 119.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 119.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 118.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 118.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 117.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 116.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 116.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 116.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 115.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 115.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 115.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 114.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 113.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 113.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 111.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 111.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 111.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 111.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 110.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 110.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 110.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 108.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 108.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 107.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 107.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 106.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 105.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 105.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 104.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 104.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 103.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 103.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 103.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 102.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 101.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 101.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 101.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 100.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 100.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 100.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 100.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 100.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 100.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 99.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 99.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 98.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 98.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 98.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 97.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 97.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 97.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 95.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 95.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 95.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 94.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 94.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 93.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 93.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 93.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 93.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 92.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 92.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 91.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 91.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 91.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 91.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 90.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 90.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 90.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 89.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 89.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 89.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 88.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 88.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 88.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 88.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 87.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 87.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 87.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 86.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 86.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 86.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 86.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 85.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 85.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 85.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 85.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 84.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 84.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 84.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 83.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 83.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 82.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 82.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 82.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 82.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 82.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 82.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 81.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 81.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 81.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 80.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 79.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 79.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 79.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 79.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 78.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 78.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 76.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 76.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 75.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 75.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 75.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 75.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 75.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 74.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 74.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 74.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 74.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 73.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 73.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 72.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 72.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 72.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 71.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 71.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 71.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 71.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 70.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 70.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 69.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 69.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 68.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 68.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 67.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 67.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 67.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 66.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 66.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 66.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 66.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 66.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 65.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 64.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 64.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 64.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 64.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 64.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 63.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 63.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 62.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 62.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 61.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 60.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 60.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 59.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 58.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 58.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 58.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 58.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 57.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 57.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 52.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 51.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 50.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 50.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 48.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 46.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 46.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 43.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 43.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 42.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 41.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 41.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 40.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 36.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

129.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 129.0
FF:10164-103B2 76 years, female 129.0
Nucleus accumbens
Scaled Tags Per Million: 73.1
FF:10037-101F1 23-56 years, mixed 73.1
Putamen
Scaled Tags Per Million: 79.8
FF:10176-103C5 60 years, female 79.8
Globus pallidus
Scaled Tags Per Million: 95.2
FF:10161-103A8 76 years, female 99.4
FF:10175-103C4 60 years, female 91.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.2
Pig sample Sample description nTPM
Caudate
nTPM: 24.1
Samples: 4

Max nTPM: 28.7
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 24.8
Sample C Male 28.7
Sample D Male 22.1
Putamen
nTPM: 27.3
Samples: 4

Max nTPM: 31.3
Min nTPM: 21.1
Sample A Female 29.5
Sample B Female 21.1
Sample C Male 31.3
Sample D Male 27.1
Septum
nTPM: 23.9
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.8
Sample A Female 24.4
Sample B Female 20.8
Sample C Male 28.2
Sample D Male 22.3
Ventral pallidum
nTPM: 25.8
Samples: 4

Max nTPM: 33.9
Min nTPM: 20.2
Sample A Female 20.2
Sample B Female 25.1
Sample C Male 33.9
Sample D Male 24.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 36.2
Samples: 4

Max nTPM: 38.5
Min nTPM: 34.7
Sample A Male 38.5
Sample B Male 35.6
Sample C Female 34.7
Sample D Female 35.8
Septum
nTPM: 43.0
Samples: 4

Max nTPM: 46.9
Min nTPM: 38.4
Sample A Male 38.4
Sample B Male 46.9
Sample C Female 44.5
Sample D Female 42.0
Ventral forebrain
nTPM: 37.9
Samples: 4

Max nTPM: 39.2
Min nTPM: 36.8
Sample A Male 36.8
Sample B Male 38.1
Sample C Female 37.5
Sample D Female 39.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.8
227161 Antisense, RP_040604_02_A03, Mouse strain C57BL/6J (56 days, male) 30.2
68203485 Antisense, RP_041208_01_C05, Mouse strain C57BL/6J (56 days, male) 5.3
Pallidum
Expression energy: 17.4
227161 Antisense, RP_040604_02_A03, Mouse strain C57BL/6J (56 days, male) 29.1
68203485 Antisense, RP_041208_01_C05, Mouse strain C57BL/6J (56 days, male) 5.6

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