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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:91.4 nTPM
HPA Brain:89.3 nTPM
GTEx:91.4 nTPM
FANTOM5:83.9 Scaled Tags Per Million
Pig:41.4 nTPM
Mouse:91.9 nTPM
Allen mouse:3.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011993Antibody HPA011994
Glial cells LowMedium
Neuronal cells Not detectedNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 89.1
2481 Female, age 94, left hemisphere 109.6
1857 Female, age 85, left hemisphere 107.2
1781 Male, age 74, unknown 97.2
2290 Female, age 72, unknown 89.3
2846 Female, age 79, unknown 79.3
2288 Male, age 75, left hemisphere 79.1
2289 Male, age 61, right hemisphere 77.7
1854 Male, age 80, left hemisphere 73.2
Globus pallidus, externus
nTPM: 46.9
2646 Male, age 61, right hemisphere 71.8
2772 Female, age 79, unknown 41.6
1996 Male, age 80, right hemisphere 41.1
2567 Female, age 72, unknown 40.1
2395 Male, age 75, both hemispheres 39.9
Globus pallidus, internus
nTPM: 46.2
2483 Female, age 94, right hemisphere 77.0
1818 Male, age 74, unknown 46.4
2778 Female, age 91, both hemispheres 42.0
2037 Male, age 80, right hemisphere 41.9
2111 Female, age 85, right hemisphere 41.4
2287 Male, age 75, right hemisphere 39.8
2566 Female, age 72, unknown 35.1
Nucleus accumbens
nTPM: 67.1
2286 Male, age 75, left hemisphere 89.8
1806 Female, age 85, left hemisphere 86.3
1783 Male, age 74, unknown 83.8
2391 Female, age 94, left hemisphere 73.4
2824 Male, age 61, right hemisphere 66.1
1856 Female, age 91, right hemisphere 57.7
2698 Female, age 72, unknown 46.6
2732 Male, age 80, right hemisphere 33.5
Nucleus basalis of Meynert
nTPM: 71.5
2569 Male, age 61, both hemispheres 91.2
2484 Female, age 94, left hemisphere 88.4
2393 Male, age 80, right hemisphere 57.7
2821 Male, age 75, both hemispheres 48.9
Nucleus of the diagonal band
nTPM: 68.7
2029 Male, age 61, right hemisphere 103.8
2775 Male, age 80, right hemisphere 74.0
2195 Female, age 85, both hemispheres 65.2
1812 Female, age 91, both hemispheres 58.4
1979 Male, age 74, unknown 42.3
Putamen
nTPM: 89.3
2647 Male, age 75, left hemisphere 143.1
2482 Female, age 94, left hemisphere 93.6
2489 Female, age 72, unknown 92.8
1829 Male, age 74, unknown 79.9
2466 Female, age 79, unknown 76.8
1937 Female, age 91, right hemisphere 71.2
1838 Male, age 80, right hemisphere 67.6
Septal nuclei
nTPM: 61.1
2031 Female, age 72, unknown 86.1
2059 Female, age 85, both hemispheres 76.2
1960 Male, age 74, unknown 66.3
2629 Female, age 94, right hemisphere 60.3
2009 Female, age 91, both hemispheres 53.1
2394 Male, age 61, left hemisphere 46.8
2199 Male, age 80, right hemisphere 38.5
Stria terminalis, bed nucleus
nTPM: 56.9
1974 Female, age 91, both hemispheres 73.2
2486 Female, age 94, both hemispheres 69.3
2201 Male, age 74, unknown 28.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 82.5
Samples: 246

Max nTPM: 181.8
Min nTPM: 34.1
Std nTPM: 28.3
Median nTPM: 77.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 181.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 172.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 171.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 169.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 168.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 163.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 149.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 148.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 146.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 145.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 144.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 143.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 140.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 137.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 133.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 130.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 130.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 129.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 125.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 125.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 124.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 123.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 123.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 122.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 122.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 117.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 115.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 115.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 114.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 113.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 112.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 111.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 111.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 109.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 108.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 107.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 107.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 106.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 106.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 106.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 106.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 105.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 105.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 105.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 105.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 104.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 103.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 102.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 102.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 101.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 101.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 100.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 99.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 99.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 99.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 98.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 98.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 98.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 98.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 98.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 98.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 98.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 98.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 98.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 96.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 96.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 96.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 95.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 95.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 94.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 94.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 94.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 93.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 93.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 92.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 92.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 92.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 92.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 92.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 91.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 91.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 91.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 90.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 90.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 89.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 89.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 88.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 88.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 88.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 88.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 87.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 86.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 86.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 86.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 85.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 84.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 84.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 84.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 84.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 84.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 83.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 83.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 82.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 82.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 82.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 81.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 81.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 80.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 80.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 80.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 79.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 79.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 79.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 79.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 79.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 78.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 78.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 78.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 78.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 76.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 76.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 75.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 75.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 74.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 74.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 74.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 74.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 73.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 73.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 73.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 72.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 72.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 72.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 72.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 71.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 71.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 70.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 70.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 70.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 69.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 69.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 68.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 68.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 68.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 68.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 68.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 68.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 67.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 66.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 66.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 66.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 66.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 66.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 65.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 65.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 65.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 65.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 65.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 65.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 65.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 65.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 65.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 64.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 64.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 64.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 64.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 62.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 62.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 62.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 62.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 61.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 61.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 60.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 60.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 60.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 59.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 59.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 59.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 58.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 58.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 58.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 57.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 57.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 56.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 55.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 55.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 54.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 54.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 54.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 52.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 52.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 51.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 51.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 51.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 50.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 50.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 50.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 49.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 49.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 48.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 48.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 46.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 46.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 45.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 44.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 43.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 42.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 41.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 38.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 38.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 36.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 34.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 60.6
Samples: 246

Max nTPM: 147.3
Min nTPM: 15.2
Std nTPM: 23.4
Median nTPM: 55.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 147.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 141.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 120.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 120.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 118.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 117.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 115.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 115.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 115.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 110.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 106.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 104.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 103.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 103.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 102.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 101.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 99.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 98.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 97.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 97.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 96.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 96.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 95.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 95.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 95.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 95.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 94.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 94.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 92.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 92.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 91.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 91.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 90.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 90.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 89.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 88.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 87.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 87.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 86.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 86.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 85.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 85.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 85.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 81.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 81.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 81.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 80.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 80.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 79.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 78.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 78.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 77.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 77.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 77.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 77.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 76.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 76.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 75.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 74.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 73.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 73.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 73.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 73.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 73.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 73.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 73.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 73.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 72.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 71.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 70.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 70.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 70.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 69.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 69.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 68.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 68.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 68.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 68.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 68.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 68.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 66.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 66.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 66.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 66.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 65.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 64.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 64.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 64.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 64.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 64.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 64.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 63.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 63.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 63.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 62.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 62.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 62.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 61.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 61.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 60.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 60.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 60.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 59.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 59.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 59.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 59.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 59.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 58.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 58.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 58.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 57.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 57.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 57.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 57.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 57.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 56.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 56.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 56.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 56.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 56.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 55.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 55.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 54.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 54.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 54.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 53.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 53.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 53.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 53.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 53.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 52.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 52.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 52.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 52.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 52.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 51.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 51.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 51.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 51.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 51.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 51.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 51.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 51.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 50.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 50.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 50.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 50.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 49.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 49.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 49.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 49.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 48.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 48.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 47.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 47.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 47.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 47.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 47.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 47.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 46.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 46.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 46.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 46.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 46.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 46.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 46.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 46.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 45.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 45.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 45.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 45.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 45.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 45.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 45.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 45.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 44.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 44.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 44.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 44.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 44.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 44.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 43.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 43.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 43.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 43.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 43.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 42.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 42.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 42.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 42.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 41.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 41.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 40.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 39.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 39.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 39.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 39.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 39.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 39.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 38.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 38.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 37.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 37.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 37.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 37.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 37.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 36.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 36.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 36.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 36.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 35.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 35.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 34.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 33.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 33.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 33.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 32.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 32.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 31.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 31.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 31.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 31.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 30.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 29.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 29.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 29.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 28.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 28.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 27.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 27.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 25.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 24.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 24.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 20.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 18.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.2
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Brain - Putamen (basal ganglia)
Average nTPM: 91.4
Samples: 205

Max nTPM: 217.0
Min nTPM: 27.9
Std nTPM: 32.4
Median nTPM: 86.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 217.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 191.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 174.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 165.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 164.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 162.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 160.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 159.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 156.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 156.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 156.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 153.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 151.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 148.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 147.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 142.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 140.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 139.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 138.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 138.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 137.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 135.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 133.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 133.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 131.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 130.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 130.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 129.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 128.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 125.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 124.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 123.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 121.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 121.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 121.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 120.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 119.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 119.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 118.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 117.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 117.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 116.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 115.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 112.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 112.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 112.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 112.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 111.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 111.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 111.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 110.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 110.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 110.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 109.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 109.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 109.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 109.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 109.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 108.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 107.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 107.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 107.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 107.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 106.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 106.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 105.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 103.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 103.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 102.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 101.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 100.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 100.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 99.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 99.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 98.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 97.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 97.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 97.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 96.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 96.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 95.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 95.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 95.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 94.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 92.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 92.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 92.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 92.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 92.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 91.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 90.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 89.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 89.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 88.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 88.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 87.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 87.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 87.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 87.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 87.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 86.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 86.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 86.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 85.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 85.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 84.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 83.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 82.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 82.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 82.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 82.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 81.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 81.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 81.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 80.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 80.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 80.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 79.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 78.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 77.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 76.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 75.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 75.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 74.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 74.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 74.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 73.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 73.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 73.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 73.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 73.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 73.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 72.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 72.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 72.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 71.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 71.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 71.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 71.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 70.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 70.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 70.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 70.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 70.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 69.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 69.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 68.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 68.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 67.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 67.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 66.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 66.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 66.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 66.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 65.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 64.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 64.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 64.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 63.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 63.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 63.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 63.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 63.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 62.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 62.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 62.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 62.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 62.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 62.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 61.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 61.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 61.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 60.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 60.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 60.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 60.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 55.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 55.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 54.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 53.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 53.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 53.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 52.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 52.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 50.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 48.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 48.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 48.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 48.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 46.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 46.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 42.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 42.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 41.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 39.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 33.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 27.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

83.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 63.2
FF:10164-103B2 76 years, female 63.2
Nucleus accumbens
Scaled Tags Per Million: 83.9
FF:10037-101F1 23-56 years, mixed 83.9
Putamen
Scaled Tags Per Million: 45.9
FF:10176-103C5 60 years, female 45.9
Globus pallidus
Scaled Tags Per Million: 43.5
FF:10161-103A8 76 years, female 49.3
FF:10175-103C4 60 years, female 37.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.4
Pig sample Sample description nTPM
Caudate
nTPM: 37.8
Samples: 4

Max nTPM: 44.0
Min nTPM: 28.4
Sample A Female 34.7
Sample B Female 44.0
Sample C Male 44.0
Sample D Male 28.4
Putamen
nTPM: 33.1
Samples: 4

Max nTPM: 36.4
Min nTPM: 30.1
Sample A Female 32.6
Sample B Female 30.1
Sample C Male 36.4
Sample D Male 33.2
Septum
nTPM: 41.0
Samples: 4

Max nTPM: 47.5
Min nTPM: 35.8
Sample A Female 35.8
Sample B Female 47.5
Sample C Male 42.5
Sample D Male 38.0
Ventral pallidum
nTPM: 41.4
Samples: 4

Max nTPM: 53.8
Min nTPM: 30.2
Sample A Female 30.2
Sample B Female 51.0
Sample C Male 53.8
Sample D Male 30.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 91.9
Samples: 4

Max nTPM: 103.6
Min nTPM: 81.3
Sample A Male 81.3
Sample B Male 87.4
Sample C Female 103.6
Sample D Female 95.2
Septum
nTPM: 81.7
Samples: 4

Max nTPM: 90.2
Min nTPM: 76.9
Sample A Male 81.5
Sample B Male 90.2
Sample C Female 78.3
Sample D Female 76.9
Ventral forebrain
nTPM: 90.4
Samples: 4

Max nTPM: 103.5
Min nTPM: 73.7
Sample A Male 100.3
Sample B Male 73.7
Sample C Female 84.0
Sample D Female 103.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.3
69015242 Antisense, RP_050310_02_E11, Mouse strain C57BL/6J (56 days, male) 4.6
72129243 Antisense, RP_051017_03_E03, Mouse strain C57BL/6J (56 days, male) 2.1
Pallidum
Expression energy: 1.9
69015242 Antisense, RP_050310_02_E11, Mouse strain C57BL/6J (56 days, male) 2.7
72129243 Antisense, RP_051017_03_E03, Mouse strain C57BL/6J (56 days, male) 1.1

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