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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:220.4 nTPM
HPA Brain:140.5 nTPM
GTEx:220.4 nTPM
FANTOM5:231.2 Scaled Tags Per Million
Pig:71.1 nTPM
Mouse:42.5 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019004Antibody HPA073666
Glial cells MediumHigh
Neuronal cells LowHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 140.5
2481 Female, age 94, left hemisphere 200.9
1857 Female, age 85, left hemisphere 183.5
2290 Female, age 72, unknown 151.1
1854 Male, age 80, left hemisphere 150.8
2288 Male, age 75, left hemisphere 127.6
2289 Male, age 61, right hemisphere 109.5
1781 Male, age 74, unknown 105.5
2846 Female, age 79, unknown 95.2
Globus pallidus, externus
nTPM: 123.0
1996 Male, age 80, right hemisphere 178.1
2772 Female, age 79, unknown 141.5
2646 Male, age 61, right hemisphere 122.6
2395 Male, age 75, both hemispheres 118.2
2567 Female, age 72, unknown 54.9
Globus pallidus, internus
nTPM: 121.9
2483 Female, age 94, right hemisphere 168.2
2037 Male, age 80, right hemisphere 146.6
1818 Male, age 74, unknown 143.2
2287 Male, age 75, right hemisphere 131.0
2778 Female, age 91, both hemispheres 119.6
2111 Female, age 85, right hemisphere 81.4
2566 Female, age 72, unknown 63.6
Nucleus accumbens
nTPM: 140.0
2286 Male, age 75, left hemisphere 175.9
1806 Female, age 85, left hemisphere 165.1
2824 Male, age 61, right hemisphere 141.1
1856 Female, age 91, right hemisphere 139.6
2391 Female, age 94, left hemisphere 136.7
2698 Female, age 72, unknown 126.2
1783 Male, age 74, unknown 118.3
2732 Male, age 80, right hemisphere 117.2
Nucleus basalis of Meynert
nTPM: 103.7
2569 Male, age 61, both hemispheres 132.7
2393 Male, age 80, right hemisphere 111.7
2484 Female, age 94, left hemisphere 89.8
2821 Male, age 75, both hemispheres 80.7
Nucleus of the diagonal band
nTPM: 122.1
1812 Female, age 91, both hemispheres 145.8
2195 Female, age 85, both hemispheres 119.8
1979 Male, age 74, unknown 119.2
2775 Male, age 80, right hemisphere 118.6
2029 Male, age 61, right hemisphere 107.2
Putamen
nTPM: 102.1
2482 Female, age 94, left hemisphere 146.4
1838 Male, age 80, right hemisphere 126.5
1937 Female, age 91, right hemisphere 123.4
2466 Female, age 79, unknown 95.3
1829 Male, age 74, unknown 84.1
2647 Male, age 75, left hemisphere 70.4
2489 Female, age 72, unknown 68.7
Septal nuclei
nTPM: 122.4
2059 Female, age 85, both hemispheres 144.4
2031 Female, age 72, unknown 140.5
2009 Female, age 91, both hemispheres 134.6
1960 Male, age 74, unknown 121.4
2199 Male, age 80, right hemisphere 113.5
2629 Female, age 94, right hemisphere 109.5
2394 Male, age 61, left hemisphere 92.8
Stria terminalis, bed nucleus
nTPM: 106.2
1974 Female, age 91, both hemispheres 114.5
2201 Male, age 74, unknown 103.0
2486 Female, age 94, both hemispheres 101.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 191.0
Samples: 246

Max nTPM: 382.8
Min nTPM: 77.2
Std nTPM: 48.9
Median nTPM: 182.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 382.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 356.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 327.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 322.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 319.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 309.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 304.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 300.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 298.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 298.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 297.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 296.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 291.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 282.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 281.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 279.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 277.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 276.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 275.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 268.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 262.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 260.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 259.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 259.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 258.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 258.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 256.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 248.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 248.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 242.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 240.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 239.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 238.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 237.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 237.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 237.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 237.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 236.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 236.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 236.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 235.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 233.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 231.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 231.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 229.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 228.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 226.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 226.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 226.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 225.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 224.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 224.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 222.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 222.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 221.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 220.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 218.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 217.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 216.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 216.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 214.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 214.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 214.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 213.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 213.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 212.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 211.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 211.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 211.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 211.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 210.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 209.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 209.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 208.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 208.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 208.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 207.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 207.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 207.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 205.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 205.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 204.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 203.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 203.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 202.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 202.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 202.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 200.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 200.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 200.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 200.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 198.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 197.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 196.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 196.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 196.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 196.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 195.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 195.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 194.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 194.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 194.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 193.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 193.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 192.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 192.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 192.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 192.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 192.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 192.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 191.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 190.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 188.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 188.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 187.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 187.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 186.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 185.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 185.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 184.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 184.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 183.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 182.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 182.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 182.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 182.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 182.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 181.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 181.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 181.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 180.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 180.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 180.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 179.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 179.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 179.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 178.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 178.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 177.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 177.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 176.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 175.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 175.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 175.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 175.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 175.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 175.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 175.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 174.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 174.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 174.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 174.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 173.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 172.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 172.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 172.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 171.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 170.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 169.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 169.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 168.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 168.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 168.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 168.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 167.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 166.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 166.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 166.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 165.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 165.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 165.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 164.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 164.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 163.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 163.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 163.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 163.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 162.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 161.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 161.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 160.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 160.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 159.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 159.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 158.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 158.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 156.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 156.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 155.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 154.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 154.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 153.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 153.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 153.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 152.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 152.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 151.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 150.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 150.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 149.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 149.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 148.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 147.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 147.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 145.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 144.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 144.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 144.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 144.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 144.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 143.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 143.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 142.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 141.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 138.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 138.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 138.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 137.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 137.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 136.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 136.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 135.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 134.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 134.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 134.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 130.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 130.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 129.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 128.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 128.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 128.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 127.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 125.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 125.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 123.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 123.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 122.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 121.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 114.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 110.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 110.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 101.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 90.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 84.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 220.4
Samples: 246

Max nTPM: 573.6
Min nTPM: 115.5
Std nTPM: 65.5
Median nTPM: 206.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 573.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 573.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 454.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 397.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 387.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 382.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 375.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 352.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 348.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 341.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 340.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 334.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 328.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 322.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 322.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 317.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 317.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 310.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 310.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 309.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 309.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 308.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 307.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 307.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 306.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 306.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 304.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 300.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 300.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 300.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 299.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 293.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 290.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 286.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 284.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 281.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 278.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 275.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 274.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 274.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 273.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 273.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 273.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 272.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 269.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 268.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 268.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 268.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 265.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 264.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 263.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 262.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 258.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 258.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 257.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 257.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 255.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 254.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 251.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 251.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 248.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 248.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 248.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 246.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 246.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 243.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 243.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 243.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 243.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 242.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 242.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 240.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 239.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 237.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 237.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 236.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 235.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 233.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 232.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 232.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 232.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 231.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 231.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 231.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 230.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 228.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 225.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 225.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 224.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 224.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 224.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 223.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 223.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 222.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 222.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 222.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 221.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 221.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 221.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 220.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 220.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 220.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 220.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 219.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 217.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 217.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 215.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 214.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 212.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 212.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 211.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 210.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 210.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 210.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 209.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 209.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 209.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 208.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 207.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 207.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 207.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 206.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 206.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 206.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 205.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 204.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 204.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 204.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 204.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 203.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 203.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 202.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 202.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 202.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 201.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 200.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 200.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 199.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 198.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 197.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 197.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 197.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 197.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 197.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 197.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 197.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 197.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 196.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 195.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 194.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 194.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 193.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 193.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 192.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 192.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 192.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 192.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 191.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 191.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 191.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 190.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 189.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 189.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 188.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 187.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 186.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 186.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 186.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 185.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 185.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 185.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 185.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 185.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 184.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 182.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 182.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 182.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 181.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 181.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 181.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 180.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 180.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 180.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 179.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 179.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 178.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 178.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 178.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 177.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 177.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 177.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 175.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 175.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 175.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 173.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 172.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 171.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 171.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 171.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 170.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 169.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 169.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 168.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 168.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 167.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 167.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 166.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 166.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 166.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 165.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 164.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 164.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 163.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 162.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 161.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 161.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 161.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 160.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 160.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 159.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 159.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 158.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 157.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 156.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 152.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 150.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 150.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 149.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 148.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 144.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 144.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 143.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 143.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 137.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 136.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 135.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 134.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 126.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 125.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 123.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 121.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 120.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 117.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 116.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 115.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 115.5
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Brain - Putamen (basal ganglia)
Average nTPM: 164.3
Samples: 205

Max nTPM: 315.0
Min nTPM: 91.9
Std nTPM: 40.3
Median nTPM: 158.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 315.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 313.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 284.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 283.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 274.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 253.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 252.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 249.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 248.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 248.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 247.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 233.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 233.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 232.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 225.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 224.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 223.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 222.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 220.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 218.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 214.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 213.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 212.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 212.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 211.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 211.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 209.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 208.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 207.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 201.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 199.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 197.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 196.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 195.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 195.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 194.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 193.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 193.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 193.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 192.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 192.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 192.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 190.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 190.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 189.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 189.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 188.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 188.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 188.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 186.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 186.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 186.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 185.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 185.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 184.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 184.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 184.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 183.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 183.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 180.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 180.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 180.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 178.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 178.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 177.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 177.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 176.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 176.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 175.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 172.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 172.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 172.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 171.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 171.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 171.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 170.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 169.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 169.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 169.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 169.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 168.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 168.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 167.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 166.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 164.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 164.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 163.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 163.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 163.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 162.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 162.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 162.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 162.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 161.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 161.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 160.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 160.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 160.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 159.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 159.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 159.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 158.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 158.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 158.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 158.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 158.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 158.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 157.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 157.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 156.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 155.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 155.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 155.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 155.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 155.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 154.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 154.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 153.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 153.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 153.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 152.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 152.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 151.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 151.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 151.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 150.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 150.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 149.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 148.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 147.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 147.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 146.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 146.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 146.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 146.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 145.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 145.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 145.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 144.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 144.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 144.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 144.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 143.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 143.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 142.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 141.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 141.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 141.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 139.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 139.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 138.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 135.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 135.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 134.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 134.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 134.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 132.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 132.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 132.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 132.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 132.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 131.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 131.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 131.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 131.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 131.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 130.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 130.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 129.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 129.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 129.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 128.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 127.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 127.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 126.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 125.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 123.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 122.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 121.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 121.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 119.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 119.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 117.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 117.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 115.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 115.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 115.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 115.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 114.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 114.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 112.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 111.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 109.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 108.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 107.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 105.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 104.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 104.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 102.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 102.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 101.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 99.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 95.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 93.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 91.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

231.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 220.4
FF:10164-103B2 76 years, female 220.4
Nucleus accumbens
Scaled Tags Per Million: 194.7
FF:10037-101F1 23-56 years, mixed 194.7
Putamen
Scaled Tags Per Million: 231.2
FF:10176-103C5 60 years, female 231.2
Globus pallidus
Scaled Tags Per Million: 157.8
FF:10175-103C4 60 years, female 196.1
FF:10161-103A8 76 years, female 119.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.1
Pig sample Sample description nTPM
Caudate
nTPM: 57.6
Samples: 4

Max nTPM: 63.0
Min nTPM: 52.1
Sample A Female 60.5
Sample B Female 54.6
Sample C Male 63.0
Sample D Male 52.1
Putamen
nTPM: 60.1
Samples: 4

Max nTPM: 70.5
Min nTPM: 50.8
Sample A Female 70.5
Sample B Female 50.8
Sample C Male 65.9
Sample D Male 53.2
Septum
nTPM: 71.1
Samples: 4

Max nTPM: 86.2
Min nTPM: 59.9
Sample A Female 75.2
Sample B Female 62.9
Sample C Male 86.2
Sample D Male 59.9
Ventral pallidum
nTPM: 63.2
Samples: 4

Max nTPM: 67.7
Min nTPM: 58.9
Sample A Female 61.1
Sample B Female 65.2
Sample C Male 67.7
Sample D Male 58.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 39.2
Samples: 4

Max nTPM: 41.5
Min nTPM: 36.9
Sample A Male 36.9
Sample B Male 37.7
Sample C Female 41.5
Sample D Female 40.5
Septum
nTPM: 42.5
Samples: 4

Max nTPM: 47.6
Min nTPM: 39.9
Sample A Male 40.0
Sample B Male 39.9
Sample C Female 47.6
Sample D Female 42.5
Ventral forebrain
nTPM: 36.5
Samples: 4

Max nTPM: 40.1
Min nTPM: 34.4
Sample A Male 35.5
Sample B Male 34.4
Sample C Female 40.1
Sample D Female 36.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.1
71991720 Antisense, RP_051012_03_C12, Mouse strain C57BL/6J (56 days, male) 2.1
70795910 Antisense, RP_050712_02_B12, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 1.2
71991720 Antisense, RP_051012_03_C12, Mouse strain C57BL/6J (56 days, male) 2.5
70795910 Antisense, RP_050712_02_B12, Mouse strain C57BL/6J (56 days, male) 0.0

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