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GNB1
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  • GNB1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:206.4 nTPM
FANTOM5:266.3 Scaled Tags Per Million
Pig:213.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040736
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

206.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 206.4
Samples: 246

Max nTPM: 393.3
Min nTPM: 117.7
Std nTPM: 47.7
Median nTPM: 201.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 393.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 391.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 332.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 329.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 319.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 317.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 316.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 309.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 306.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 303.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 298.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 295.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 295.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 294.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 292.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 291.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 290.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 287.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 285.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 284.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 284.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 278.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 277.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 275.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 272.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 268.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 267.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 267.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 266.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 262.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 261.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 261.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 260.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 258.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 257.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 255.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 254.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 254.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 254.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 253.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 252.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 250.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 249.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 249.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 246.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 246.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 245.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 244.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 244.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 244.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 242.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 240.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 239.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 239.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 237.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 236.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 235.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 234.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 234.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 233.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 233.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 231.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 231.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 230.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 229.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 228.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 228.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 228.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 227.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 227.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 226.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 226.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 225.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 225.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 224.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 224.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 222.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 222.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 222.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 222.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 222.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 222.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 220.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 220.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 220.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 217.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 217.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 216.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 216.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 215.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 215.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 214.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 213.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 212.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 212.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 211.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 211.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 210.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 210.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 210.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 210.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 210.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 209.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 209.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 209.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 209.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 209.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 207.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 206.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 206.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 206.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 206.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 206.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 206.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 205.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 204.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 204.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 203.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 202.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 201.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 201.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 201.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 201.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 200.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 200.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 199.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 199.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 198.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 197.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 196.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 196.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 195.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 194.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 194.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 194.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 194.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 193.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 193.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 193.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 192.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 192.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 192.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 191.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 191.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 190.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 189.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 189.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 189.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 188.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 188.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 186.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 185.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 184.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 183.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 183.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 183.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 183.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 182.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 182.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 181.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 180.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 179.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 177.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 177.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 177.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 176.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 176.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 176.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 175.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 175.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 175.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 175.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 174.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 174.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 174.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 173.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 172.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 172.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 171.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 171.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 170.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 169.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 169.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 169.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 169.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 169.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 169.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 168.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 168.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 167.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 167.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 166.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 166.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 166.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 165.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 165.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 164.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 164.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 163.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 163.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 163.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 163.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 162.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 161.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 161.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 160.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 160.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 160.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 160.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 160.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 159.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 159.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 159.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 159.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 158.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 156.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 156.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 156.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 156.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 155.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 154.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 154.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 153.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 153.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 152.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 152.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 150.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 150.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 150.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 150.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 148.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 148.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 147.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 144.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 142.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 141.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 137.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 135.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 135.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 134.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 133.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 133.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 132.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 125.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 120.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 117.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

266.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 266.3
FF:10164-103B2 76 years, female 266.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.5
Pig sample Sample description nTPM
Caudate
nTPM: 213.5
Samples: 4

Max nTPM: 244.7
Min nTPM: 175.0
Sample A Female 175.0
Sample B Female 218.9
Sample C Male 244.7
Sample D Male 215.5

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