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  • GNB1
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:173.8 nTPM
HPA Brain:298.9 nTPM
GTEx:173.8 nTPM
FANTOM5:292.0 Scaled Tags Per Million
Pig:157.5 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

298.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 288.0
2565 Male, age 75, midline 372.2
1981 Female, age 72, midline 312.6
2194 Female, age 79, both hemispheres 274.6
2816 Male, age 47, midline 252.8
2048 Male, age 55, midline 228.0
Cervical spinal cord, dorsal horn
nTPM: 298.9
2069 Male, age 47, both hemispheres 316.0
2173 Female, age 72, unknown 314.1
2296 Male, age 66, both hemispheres 304.0
2297 Male, age 75, both hemispheres 294.4
1877 Male, age 55, unknown 284.0
2721 Male, age 90, both hemispheres 280.8
Cervical spinal cord, ventral horn
nTPM: 296.4
2480 Male, age 75, both hemispheres 361.8
2295 Male, age 66, both hemispheres 315.8
2098 Female, age 72, unknown 294.0
2809 Male, age 90, both hemispheres 292.4
2068 Male, age 55, unknown 265.6
2820 Female, age 79, both hemispheres 248.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 173.8
Samples: 159

Max nTPM: 229.0
Min nTPM: 130.6
Std nTPM: 18.8
Median nTPM: 172.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 229.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 228.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 218.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 216.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 212.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 211.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 206.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 205.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 205.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 205.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 203.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 202.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 202.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 200.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 199.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 198.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 198.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 197.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 197.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 196.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 196.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 196.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 196.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 194.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 193.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 192.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 191.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 191.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 191.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 191.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 190.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 189.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 189.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 188.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 188.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 188.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 188.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 188.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 187.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 187.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 187.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 187.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 187.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 184.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 184.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 183.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 182.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 182.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 182.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 181.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 181.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 181.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 180.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 179.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 179.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 178.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 178.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 178.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 178.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 178.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 177.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 176.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 176.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 176.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 175.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 175.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 175.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 175.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 175.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 174.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 174.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 174.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 173.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 173.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 173.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 173.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 173.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 172.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 172.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 172.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 171.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 171.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 170.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 170.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 170.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 170.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 169.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 169.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 169.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 169.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 169.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 168.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 168.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 167.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 166.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 166.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 165.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 165.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 165.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 165.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 165.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 165.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 165.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 164.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 164.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 164.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 164.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 164.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 163.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 163.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 163.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 163.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 163.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 163.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 162.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 162.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 161.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 161.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 161.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 161.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 161.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 160.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 160.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 160.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 160.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 159.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 158.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 157.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 157.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 157.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 157.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 155.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 155.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 155.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 155.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 154.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 154.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 154.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 154.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 153.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 153.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 153.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 153.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 151.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 151.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 149.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 149.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 148.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 148.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 147.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 147.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 142.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 142.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 140.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 138.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 137.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 136.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 130.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 130.6
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

292.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 292.0
FF:10159-103A6 76 years, female 306.1
FF:10181-103D1 60 years, female 277.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 157.5
Samples: 4

Max nTPM: 168.4
Min nTPM: 134.9
Sample A Female 167.8
Sample B Female 134.9
Sample C Male 168.4
Sample D Male 159.0
Ventral spinal cord
nTPM: 152.5
Samples: 4

Max nTPM: 155.0
Min nTPM: 150.9
Sample A Female 151.6
Sample B Female 150.9
Sample C Male 152.3
Sample D Male 155.0

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