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  • SLC1A3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:378.6 nTPM
HPA Brain:370.2 nTPM
GTEx:378.6 nTPM
FANTOM5:1388.3 Scaled Tags Per Million
Pig:806.8 nTPM
Mouse:609.8 nTPM
Allen mouse:3.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA037467Antibody CAB002573
Glial cells MediumMedium
Neuronal cells Not detectedNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

370.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 370.2
2481 Female, age 94, left hemisphere 573.1
1857 Female, age 85, left hemisphere 518.9
1854 Male, age 80, left hemisphere 458.1
2289 Male, age 61, right hemisphere 350.8
2288 Male, age 75, left hemisphere 304.4
2290 Female, age 72, unknown 298.8
2846 Female, age 79, unknown 235.7
1781 Male, age 74, unknown 221.8
Globus pallidus, externus
nTPM: 275.9
1996 Male, age 80, right hemisphere 415.4
2772 Female, age 79, unknown 307.3
2646 Male, age 61, right hemisphere 294.8
2395 Male, age 75, both hemispheres 207.9
2567 Female, age 72, unknown 154.4
Globus pallidus, internus
nTPM: 225.4
2037 Male, age 80, right hemisphere 360.8
2483 Female, age 94, right hemisphere 328.6
1818 Male, age 74, unknown 310.5
2287 Male, age 75, right hemisphere 167.2
2778 Female, age 91, both hemispheres 155.5
2111 Female, age 85, right hemisphere 132.7
2566 Female, age 72, unknown 122.5
Nucleus accumbens
nTPM: 316.0
1806 Female, age 85, left hemisphere 458.0
2286 Male, age 75, left hemisphere 397.1
2391 Female, age 94, left hemisphere 364.0
1856 Female, age 91, right hemisphere 306.8
2732 Male, age 80, right hemisphere 275.3
2824 Male, age 61, right hemisphere 254.6
2698 Female, age 72, unknown 237.6
1783 Male, age 74, unknown 235.1
Nucleus basalis of Meynert
nTPM: 274.3
2393 Male, age 80, right hemisphere 353.6
2569 Male, age 61, both hemispheres 308.5
2484 Female, age 94, left hemisphere 281.3
2821 Male, age 75, both hemispheres 153.9
Nucleus of the diagonal band
nTPM: 285.2
2195 Female, age 85, both hemispheres 328.1
2775 Male, age 80, right hemisphere 317.6
1979 Male, age 74, unknown 281.7
1812 Female, age 91, both hemispheres 277.1
2029 Male, age 61, right hemisphere 221.5
Putamen
nTPM: 296.3
2482 Female, age 94, left hemisphere 489.3
1838 Male, age 80, right hemisphere 367.0
1937 Female, age 91, right hemisphere 272.0
2647 Male, age 75, left hemisphere 250.6
2489 Female, age 72, unknown 244.7
1829 Male, age 74, unknown 235.4
2466 Female, age 79, unknown 215.3
Septal nuclei
nTPM: 304.5
2059 Female, age 85, both hemispheres 463.1
2199 Male, age 80, right hemisphere 322.1
2031 Female, age 72, unknown 294.8
1960 Male, age 74, unknown 289.7
2629 Female, age 94, right hemisphere 288.0
2009 Female, age 91, both hemispheres 263.3
2394 Male, age 61, left hemisphere 210.6
Stria terminalis, bed nucleus
nTPM: 227.7
2486 Female, age 94, both hemispheres 246.8
2201 Male, age 74, unknown 233.6
1974 Female, age 91, both hemispheres 202.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

378.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 358.1
Samples: 246

Max nTPM: 807.4
Min nTPM: 53.9
Std nTPM: 149.8
Median nTPM: 339.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 807.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 791.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 784.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 744.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 740.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 730.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 710.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 684.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 683.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 677.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 661.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 658.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 655.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 649.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 633.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 630.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 628.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 623.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 622.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 617.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 608.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 596.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 579.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 562.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 560.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 558.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 551.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 542.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 539.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 539.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 535.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 534.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 528.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 528.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 527.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 523.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 516.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 513.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 513.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 509.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 506.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 494.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 490.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 490.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 485.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 482.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 481.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 476.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 472.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 472.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 471.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 469.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 466.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 466.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 461.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 460.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 457.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 452.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 448.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 441.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 439.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 439.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 437.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 436.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 432.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 431.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 430.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 429.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 427.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 421.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 419.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 414.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 413.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 412.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 411.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 408.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 407.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 406.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 405.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 405.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 405.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 403.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 400.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 399.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 399.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 397.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 394.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 389.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 389.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 388.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 387.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 383.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 383.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 380.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 379.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 379.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 377.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 377.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 375.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 374.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 374.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 372.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 371.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 370.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 370.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 368.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 367.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 367.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 366.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 365.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 363.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 362.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 356.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 353.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 352.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 348.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 344.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 344.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 343.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 343.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 342.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 341.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 340.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 339.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 337.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 332.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 332.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 327.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 325.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 324.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 322.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 322.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 319.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 315.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 313.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 312.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 311.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 311.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 309.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 309.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 304.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 304.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 303.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 301.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 301.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 301.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 300.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 298.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 297.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 295.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 295.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 295.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 292.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 289.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 289.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 288.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 286.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 284.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 284.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 282.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 281.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 281.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 281.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 278.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 276.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 275.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 273.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 272.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 270.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 268.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 268.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 267.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 267.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 264.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 264.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 263.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 262.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 261.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 261.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 260.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 258.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 255.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 254.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 254.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 254.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 254.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 248.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 247.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 247.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 246.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 244.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 241.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 241.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 240.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 238.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 237.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 234.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 233.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 229.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 228.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 226.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 222.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 221.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 221.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 218.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 217.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 217.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 215.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 213.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 209.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 209.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 209.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 208.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 206.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 205.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 204.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 202.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 202.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 199.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 195.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 194.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 193.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 192.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 190.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 189.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 188.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 186.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 184.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 181.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 178.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 173.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 165.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 164.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 158.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 157.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 155.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 142.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 127.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 125.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 102.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 80.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 67.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 64.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 55.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 53.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 371.7
Samples: 246

Max nTPM: 954.5
Min nTPM: 76.0
Std nTPM: 167.9
Median nTPM: 327.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 954.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 933.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 819.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 773.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 771.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 761.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 757.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 750.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 734.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 712.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 710.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 703.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 699.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 691.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 688.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 688.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 683.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 682.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 674.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 666.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 660.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 659.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 651.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 637.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 635.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 632.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 618.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 609.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 597.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 597.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 587.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 586.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 579.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 578.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 578.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 570.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 569.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 569.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 569.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 557.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 553.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 550.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 547.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 538.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 530.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 528.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 527.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 526.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 521.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 519.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 504.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 495.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 494.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 494.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 490.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 488.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 476.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 472.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 472.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 469.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 466.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 458.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 454.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 441.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 438.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 438.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 437.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 435.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 434.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 431.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 429.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 427.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 426.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 425.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 425.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 423.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 422.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 422.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 421.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 416.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 409.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 406.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 405.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 404.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 403.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 403.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 402.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 395.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 393.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 392.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 391.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 390.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 386.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 384.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 381.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 379.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 374.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 373.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 371.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 367.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 364.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 362.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 360.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 357.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 355.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 353.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 352.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 352.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 350.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 349.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 349.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 344.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 337.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 335.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 334.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 333.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 333.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 330.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 330.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 329.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 329.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 328.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 328.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 326.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 324.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 322.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 322.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 320.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 319.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 315.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 314.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 314.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 313.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 313.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 311.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 310.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 310.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 309.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 307.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 306.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 305.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 305.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 304.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 303.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 302.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 301.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 301.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 295.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 295.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 292.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 291.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 291.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 289.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 289.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 287.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 286.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 284.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 284.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 282.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 281.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 281.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 280.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 279.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 276.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 275.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 275.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 275.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 274.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 274.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 274.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 272.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 272.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 270.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 265.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 264.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 264.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 263.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 263.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 262.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 260.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 260.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 258.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 257.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 255.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 254.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 253.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 252.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 252.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 252.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 251.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 251.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 249.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 247.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 246.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 246.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 245.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 245.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 244.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 243.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 243.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 242.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 240.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 238.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 235.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 234.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 232.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 231.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 230.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 230.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 225.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 222.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 219.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 217.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 212.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 207.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 202.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 201.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 201.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 196.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 194.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 191.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 179.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 179.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 178.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 178.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 175.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 175.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 172.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 169.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 166.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 164.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 163.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 163.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 162.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 157.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 148.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 138.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 136.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 134.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 127.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 110.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 106.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 102.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 96.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 81.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 76.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 378.6
Samples: 205

Max nTPM: 1306.4
Min nTPM: 47.4
Std nTPM: 188.6
Median nTPM: 346.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1306.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 981.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 946.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 930.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 918.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 875.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 841.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 749.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 737.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 734.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 708.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 690.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 670.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 655.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 639.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 638.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 634.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 616.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 604.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 589.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 587.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 579.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 575.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 570.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 565.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 562.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 561.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 557.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 554.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 546.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 544.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 543.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 537.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 535.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 533.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 531.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 527.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 525.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 520.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 517.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 517.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 516.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 515.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 505.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 504.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 501.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 500.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 492.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 490.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 489.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 485.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 485.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 482.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 481.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 478.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 477.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 477.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 474.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 464.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 462.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 456.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 455.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 454.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 451.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 448.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 444.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 439.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 439.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 434.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 432.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 431.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 429.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 429.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 427.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 426.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 421.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 419.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 416.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 416.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 415.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 414.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 414.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 411.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 395.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 391.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 389.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 385.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 382.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 379.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 376.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 374.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 367.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 366.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 364.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 363.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 357.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 355.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 355.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 351.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 350.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 348.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 348.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 346.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 345.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 341.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 341.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 339.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 339.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 337.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 334.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 332.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 328.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 328.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 327.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 324.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 322.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 320.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 318.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 316.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 315.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 311.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 309.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 309.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 309.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 307.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 306.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 305.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 304.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 301.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 298.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 297.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 296.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 295.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 294.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 292.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 291.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 289.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 283.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 281.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 280.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 278.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 278.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 273.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 268.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 264.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 258.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 257.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 254.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 253.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 253.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 253.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 246.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 245.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 242.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 242.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 241.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 238.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 238.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 236.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 235.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 231.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 227.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 227.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 223.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 222.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 222.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 221.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 213.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 212.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 208.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 204.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 203.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 200.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 200.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 199.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 194.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 192.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 190.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 186.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 185.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 180.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 179.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 178.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 178.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 178.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 178.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 173.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 172.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 169.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 167.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 166.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 155.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 145.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 145.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 118.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 104.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 101.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 93.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 89.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 85.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 76.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 67.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 61.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 59.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 47.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1388.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1388.3
FF:10164-103B2 76 years, female 1388.3
Nucleus accumbens
Scaled Tags Per Million: 1058.8
FF:10037-101F1 23-56 years, mixed 1058.8
Putamen
Scaled Tags Per Million: 1276.5
FF:10176-103C5 60 years, female 1276.5
Globus pallidus
Scaled Tags Per Million: 865.2
FF:10175-103C4 60 years, female 1015.4
FF:10161-103A8 76 years, female 715.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

806.8
Pig sample Sample description nTPM
Caudate
nTPM: 786.4
Samples: 4

Max nTPM: 982.5
Min nTPM: 586.4
Sample A Female 586.4
Sample B Female 817.2
Sample C Male 982.5
Sample D Male 759.4
Putamen
nTPM: 806.8
Samples: 4

Max nTPM: 1228.5
Min nTPM: 483.6
Sample A Female 483.6
Sample B Female 779.1
Sample C Male 1228.5
Sample D Male 736.0
Septum
nTPM: 733.0
Samples: 4

Max nTPM: 813.1
Min nTPM: 655.5
Sample A Female 655.5
Sample B Female 774.6
Sample C Male 688.7
Sample D Male 813.1
Ventral pallidum
nTPM: 757.3
Samples: 4

Max nTPM: 855.4
Min nTPM: 713.1
Sample A Female 725.7
Sample B Female 855.4
Sample C Male 713.1
Sample D Male 734.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

609.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 376.7
Samples: 4

Max nTPM: 440.2
Min nTPM: 325.9
Sample A Male 325.9
Sample B Male 345.2
Sample C Female 395.5
Sample D Female 440.2
Septum
nTPM: 609.8
Samples: 4

Max nTPM: 753.4
Min nTPM: 472.8
Sample A Male 472.8
Sample B Male 753.4
Sample C Female 586.2
Sample D Female 626.7
Ventral forebrain
nTPM: 409.3
Samples: 4

Max nTPM: 429.3
Min nTPM: 390.4
Sample A Male 390.4
Sample B Male 395.9
Sample C Female 421.7
Sample D Female 429.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.8
77620233 Antisense, RP_070129_03_B08, Mouse strain C57BL/6J (56 days, male) 3.8
Pallidum
Expression energy: 3.2
77620233 Antisense, RP_070129_03_B08, Mouse strain C57BL/6J (56 days, male) 3.2

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