PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		16.992
Mouse brain, Intensity
Ponsi 		83.592
RNA expressioni
HPA Brain:290.0 nTPM
FANTOM5:870.5 Scaled Tags Per Million
Pig:582.0 nTPM
Mouse:147.5 nTPM
Allen mouse:0.4 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA037467
Medulla oblongata mean intensity 16.992
intensityi
FRONT BACK
Nucleus of the solitary tract 16.992
Raphe magnus nucleus 6.635
Cochlear nucleus 8.410
Lateral paragigantocellular nucleus 5.461
Raphe pallidus nucleus 13.115
Facial nucleus 9.703
Hypoglossal nucleus 4.299
Ambiguus nucleus 7.571
External cuneate nucleus 7.700
Inferior olivary nucleus 8.531
Raphe obscures nucleus 6.034
Dorsal motor nucleus of vagus 12.756
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 14.330
Parabrachial nucleus 8.902
Principle sensory trigeminal nucleus 10.868
Locus coeruleus 83.592
Pontine nucleus 6.670
Vestibular nucleus 15.863
Pontine reticular nucleus, oral 11.159
Lateral lemniscus 3.416
Superior paraolivary nucleus 15.150

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 290.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 121.3
1984 Male, age 76, both hemispheres 191.2
2090 Male, age 80, both hemispheres 115.3
2301 Female, age 85, both hemispheres 95.1
2188 Female, age 91, both hemispheres 83.7
Area postrema
nTPM: 219.4
2799 Male, age 61, both hemispheres 245.0
2054 Male, age 76, both hemispheres 225.6
2306 Male, age 80, both hemispheres 187.7
Dorsal cochlear nucleus
nTPM: 157.5
2058 Male, age 76, both hemispheres 183.8
2370 Male, age 61, both hemispheres 177.7
2802 Male, age 74, right hemisphere 164.3
2378 Male, age 80, both hemispheres 159.0
2187 Female, age 91, both hemispheres 103.0
Dorsal medullary reticular nucleus
nTPM: 112.5
2088 Male, age 76, both hemispheres 122.3
2040 Female, age 85, both hemispheres 110.7
2373 Male, age 61, both hemispheres 104.5
Dorsal motor vagal complex
nTPM: 180.0
2813 Female, age 72, unknown 258.1
2844 Male, age 55, unknown 234.0
2000 Male, age 74, unknown 216.4
2797 Male, age 61, both hemispheres 201.8
2185 Male, age 76, both hemispheres 197.6
2643 Male, age 74, both hemispheres 124.7
2133 Female, age 91, both hemispheres 109.0
2807 Female, age 85, both hemispheres 98.6
Dorsal tegmental nucleus
nTPM: 173.9
1936 Male, age 76, left hemisphere 221.7
2358 Male, age 61, both hemispheres 165.0
2083 Male, age 80, both hemispheres 155.6
2326 Male, age 74, both hemispheres 153.3
Dorsolateral tegmental area
nTPM: 167.4
2360 Male, age 74, both hemispheres 248.3
2141 Male, age 76, both hemispheres 181.9
2654 Male, age 80, both hemispheres 151.6
2337 Male, age 61, both hemispheres 138.5
2751 Female, age 85, both hemispheres 116.7
Gigantocellular reticular nuclei, medullary
nTPM: 117.6
2022 Male, age 76, right hemisphere 171.8
2314 Male, age 61, both hemispheres 142.3
1876 Female, age 85, both hemispheres 130.6
2462 Male, age 74, both hemispheres 98.0
2387 Female, age 91, both hemispheres 96.5
2310 Male, age 80, both hemispheres 66.3
Gigantocellular reticular nuclei, pars
nTPM: 97.0
2084 Female, age 85, both hemispheres 110.2
2336 Male, age 61, both hemispheres 101.3
2168 Male, age 76, both hemispheres 98.8
2706 Male, age 80, both hemispheres 88.4
2330 Male, age 80, both hemispheres 86.5
Inferior olive
nTPM: 200.4
2563 Male, age 74, both hemispheres 264.7
2085 Female, age 85, both hemispheres 231.9
2379 Male, age 80, both hemispheres 185.4
2178 Male, age 61, both hemispheres 181.0
2628 Female, age 91, both hemispheres 139.1
Kolliker-Fuse nucleus
nTPM: 164.1
2315 Male, age 76, right hemisphere 288.1
2163 Male, age 80, both hemispheres 134.8
2793 Female, age 91, left hemisphere 69.5
Lateral lemniscal nuclei
nTPM: 79.2
2169 Male, age 76, both hemispheres 109.2
2746 Female, age 85, left hemisphere 76.8
2036 Male, age 80, both hemispheres 76.1
2453 Male, age 74, right hemisphere 68.8
2320 Female, age 91, left hemisphere 65.0
Lateral medullary reticular nucleus
nTPM: 164.1
2374 Male, age 61, both hemispheres 182.4
2804 Female, age 91, both hemispheres 172.5
2305 Male, age 74, both hemispheres 170.3
2044 Male, age 76, both hemispheres 168.9
2852 Male, age 80, both hemispheres 149.4
2190 Female, age 85, both hemispheres 140.9
Lateral parabrachial nucleus
nTPM: 140.2
2792 Male, age 76, both hemispheres 214.9
2139 Female, age 85, right hemisphere 139.3
2013 Male, age 80, both hemispheres 132.0
2790 Male, age 61, both hemispheres 74.5
Lateral vestibular nucleus
nTPM: 165.1
2311 Male, age 80, both hemispheres 173.0
2184 Male, age 76, both hemispheres 157.1
Locus coeruleus
nTPM: 137.4
2123 Female, age 91, both hemispheres 171.4
2317 Female, age 72, unknown 170.7
2788 Male, age 74, unknown 166.7
1980 Male, age 76, both hemispheres 161.8
2014 Male, age 55, unknown 109.0
2162 Male, age 80, both hemispheres 100.0
2720 Male, age 74, both hemispheres 82.2
Medial olivary nucleus
nTPM: 194.4
2138 Female, age 91, both hemispheres 242.6
1943 Male, age 61, both hemispheres 203.8
1962 Male, age 76, both hemispheres 182.3
2851 Male, age 80, both hemispheres 148.7
Medial parabrachial nucleus
nTPM: 130.3
2786 Male, age 76, both hemispheres 150.5
2463 Female, age 85, right hemisphere 148.2
2156 Male, age 61, both hemispheres 135.4
2854 Male, age 80, both hemispheres 113.0
2170 Female, age 91, both hemispheres 104.4
Medial periolivary nuclei
nTPM: 97.1
2791 Male, age 74, right hemisphere 144.0
2063 Male, age 76, both hemispheres 129.2
2081 Male, age 80, both hemispheres 83.0
2171 Female, age 85, both hemispheres 71.2
2458 Female, age 91, both hemispheres 58.0
Medial vestibular nucleus
nTPM: 167.3
2743 Female, age 85, both hemispheres 200.3
2801 Male, age 74, both hemispheres 182.6
2134 Male, age 76, both hemispheres 172.4
2624 Male, age 61, both hemispheres 166.8
2093 Male, age 80, both hemispheres 152.0
2803 Female, age 91, both hemispheres 130.0
Motor facial nucleus
nTPM: 93.3
2062 Male, age 76, both hemispheres 135.1
2365 Male, age 74, right hemisphere 121.9
2795 Female, age 91, both hemispheres 110.5
2126 Male, age 61, both hemispheres 87.3
2697 Female, age 85, both hemispheres 60.7
2327 Male, age 80, both hemispheres 44.3
Motor hypoglossal nucleus
nTPM: 124.5
2461 Male, age 61, both hemispheres 182.7
2277 Male, age 76, both hemispheres 174.0
2125 Female, age 91, both hemispheres 120.3
2182 Male, age 80, both hemispheres 86.3
2132 Female, age 85, both hemispheres 59.3
Motor trigeminal nucleus
nTPM: 92.2
2309 Male, age 76, both hemispheres 149.7
2335 Male, age 61, both hemispheres 116.4
2079 Male, age 80, both hemispheres 75.7
2560 Male, age 74, both hemispheres 60.8
2321 Female, age 91, both hemispheres 58.3
Nuclei of the trapezoid body
nTPM: 88.7
1983 Male, age 76, both hemispheres 137.7
2368 Female, age 91, both hemispheres 82.2
2159 Male, age 61, both hemispheres 79.6
2166 Male, age 80, both hemispheres 77.9
2735 Female, age 85, both hemispheres 66.2
Nucleus ambiguus
nTPM: 138.9
2071 Male, age 76, both hemispheres 230.7
2096 Female, age 85, both hemispheres 47.0
Nucleus cuneatus
nTPM: 133.9
2564 Male, age 74, both hemispheres 180.8
2380 Male, age 80, both hemispheres 170.3
2562 Male, age 61, both hemispheres 149.9
2100 Male, age 76, both hemispheres 135.0
2376 Male, age 61, both hemispheres 122.9
2131 Male, age 76, both hemispheres 121.6
2808 Female, age 85, both hemispheres 120.0
2381 Male, age 80, both hemispheres 107.1
2805 Female, age 91, both hemispheres 97.3
Nucleus gracilis
nTPM: 164.5
2627 Male, age 74, both hemispheres 214.1
2299 Female, age 85, both hemispheres 188.8
2382 Male, age 80, both hemispheres 90.7
Nucleus raphe magnus
nTPM: 78.8
2455 Male, age 74, both hemispheres 121.6
2051 Male, age 76, both hemispheres 112.9
2160 Male, age 61, both hemispheres 78.4
2328 Male, age 80, both hemispheres 74.3
2459 Female, age 91, both hemispheres 58.2
2172 Female, age 85, both hemispheres 27.2
Nucleus raphe obscurus
nTPM: 144.3
2142 Male, age 76, midline 195.9
2845 Female, age 85, midline 124.3
2800 Male, age 61, midline 112.7
Nucleus raphe pallidus
nTPM: 171.1
1924 Male, age 61, midline 221.7
2145 Male, age 76, midline 177.0
2183 Male, age 80, midline 114.6
Nucleus tractus solitarii
nTPM: 241.6
2144 Female, age 91, right hemisphere 467.5
2191 Female, age 85, both hemispheres 264.2
2656 Male, age 76, both hemispheres 158.2
2307 Male, age 80, both hemispheres 76.4
Paramedian reticular nucleus
nTPM: 129.6
2052 Male, age 76, both hemispheres 199.0
2057 Male, age 80, both hemispheres 137.2
2313 Male, age 61, both hemispheres 113.0
2050 Female, age 85, both hemispheres 69.3
Parvicellular reticular nuclei
nTPM: 112.9
2095 Male, age 76, both hemispheres 153.6
2119 Male, age 80, both hemispheres 129.6
2558 Male, age 74, both hemispheres 55.6
Parvicellular reticular nuclei, medullary
nTPM: 118.7
2091 Female, age 85, both hemispheres 126.0
2181 Male, age 80, left hemisphere 123.7
2189 Female, age 91, both hemispheres 106.3
Pedunculopontine tegmental nucleus
nTPM: 164.0
1921 Female, age 85, both hemispheres 207.4
2334 Male, age 80, both hemispheres 143.6
2338 Male, age 61, both hemispheres 141.0
Peritrigeminal nucleus
nTPM: 178.4
2067 Female, age 85, both hemispheres 201.2
2136 Male, age 76, both hemispheres 181.0
2179 Male, age 61, both hemispheres 153.0
Pontine nuclei
nTPM: 74.3
1968 Male, age 76, left hemisphere 98.2
2109 Female, age 72, unknown 88.7
2319 Female, age 91, both hemispheres 86.5
1863 Male, age 55, unknown 84.7
2115 Male, age 80, left hemisphere 73.9
2727 Male, age 61, right hemisphere 61.0
2454 Male, age 74, left hemisphere 56.5
2787 Female, age 85, both hemispheres 45.1
Pontine raphe nucleus
nTPM: 132.3
2853 Male, age 76, midline 181.1
2122 Female, age 85, midline 83.4
Posteroventral cochlear nucleus
nTPM: 126.2
2371 Male, age 61, both hemispheres 170.0
2070 Male, age 76, both hemispheres 125.8
2752 Female, age 85, both hemispheres 125.6
2341 Male, age 80, both hemispheres 114.6
2135 Female, age 91, both hemispheres 95.1
Prepositus hypoglossal nucleus
nTPM: 198.4
2086 Male, age 80, both hemispheres 240.0
2855 Female, age 85, right hemisphere 156.7
Principal sensory trigeminal nucleus
nTPM: 105.9
2324 Male, age 76, both hemispheres 192.0
2158 Male, age 61, both hemispheres 82.7
2008 Male, age 80, left hemisphere 80.3
2367 Female, age 91, left hemisphere 68.8
Reticular pontine nucleus, caudal
nTPM: 79.7
2092 Male, age 76, both hemispheres 136.7
2457 Female, age 91, both hemispheres 69.6
2559 Male, age 74, both hemispheres 62.1
2332 Male, age 80, right hemisphere 50.5
Reticular pontine nucleus, oral
nTPM: 118.7
2167 Male, age 76, both hemispheres 171.1
1939 Male, age 80, both hemispheres 163.5
2012 Female, age 85, both hemispheres 97.5
2361 Male, age 74, both hemispheres 84.8
2366 Female, age 91, both hemispheres 76.5
Reticulotegmental nucleus
nTPM: 104.9
2325 Male, age 76, both hemispheres 147.2
2333 Male, age 80, both hemispheres 109.1
2322 Female, age 91, both hemispheres 97.4
2452 Male, age 74, both hemispheres 65.8
Spinal trigeminal nucleus, caudal
nTPM: 127.1
2447 Male, age 76, both hemispheres 157.4
2312 Male, age 61, both hemispheres 138.8
2642 Male, age 74, both hemispheres 124.8
2390 Female, age 91, both hemispheres 109.1
2308 Male, age 80, both hemispheres 105.6
Spinal trigeminal nucleus, interpolar
nTPM: 135.0
2625 Male, age 61, both hemispheres 181.3
2066 Male, age 76, right hemisphere 155.5
2386 Female, age 85, both hemispheres 130.2
2033 Male, age 80, both hemispheres 109.1
2389 Female, age 91, both hemispheres 98.7
Spinal trigeminal nucleus, oral
nTPM: 138.1
1978 Male, age 76, both hemispheres 192.0
2737 Female, age 85, both hemispheres 142.4
2164 Male, age 80, both hemispheres 80.0
Spinal vestibular nucleus
nTPM: 129.9
2748 Male, age 76, both hemispheres 153.6
2796 Male, age 61, both hemispheres 153.0
2806 Female, age 85, both hemispheres 148.5
2186 Female, age 91, both hemispheres 124.6
2780 Male, age 80, both hemispheres 112.7
2384 Male, age 74, both hemispheres 87.3
Subcoeruleus area
nTPM: 113.1
1958 Male, age 80, both hemispheres 135.3
2369 Female, age 85, left hemisphere 111.6
2089 Male, age 76, left hemisphere 109.0
2451 Male, age 74, both hemispheres 105.4
2323 Female, age 91, left hemisphere 104.3
Superior olive
nTPM: 94.1
2364 Male, age 74, right hemisphere 148.4
2020 Male, age 76, both hemispheres 134.4
2329 Male, age 80, right hemisphere 62.8
1875 Female, age 85, both hemispheres 62.4
2561 Female, age 91, both hemispheres 62.3
Superior vestibular nucleus
nTPM: 290.0
2383 Male, age 74, both hemispheres 425.1
2061 Male, age 76, both hemispheres 231.9
2015 Male, age 80, both hemispheres 213.1
Ventral medullary reticular nucleus
nTPM: 135.8
2372 Male, age 61, both hemispheres 143.9
2060 Male, age 76, both hemispheres 127.8
Ventral periolivary nuclei
nTPM: 92.6
2023 Male, age 76, both hemispheres 136.9
2130 Female, age 85, both hemispheres 90.6
2165 Male, age 80, both hemispheres 89.9
2794 Female, age 91, left hemisphere 53.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 139.3
1986 Male, age 76, both hemispheres 179.3
2180 Male, age 61, both hemispheres 143.7
2302 Female, age 91, both hemispheres 142.6
2741 Female, age 85, both hemispheres 125.0
2118 Male, age 80, both hemispheres 105.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 100.8
2359 Male, age 61, both hemispheres 142.8
1959 Male, age 76, both hemispheres 121.2
2840 Female, age 85, both hemispheres 97.2
2161 Male, age 80, both hemispheres 95.3
2449 Male, age 74, both hemispheres 81.0
2456 Female, age 91, both hemispheres 67.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 870.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 663.6
FF:10182-103D2 60 years, female 695.6
FF:10165-103B3 76 years, female 631.5
Medulla oblongata
Scaled Tags Per Million: 870.5
FF:10174-103C3 60 years, female 1107.1
FF:10155-103A2 76 years, female 774.9
FF:10038-101F2 18-64 years, mixed 729.5
Pons
Scaled Tags Per Million: 481.7
FF:10033-101E6 18-54 years, mixed 481.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 582.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 582.1
Samples: 4

Max nTPM: 676.9
Min nTPM: 465.6
Sample A Female 465.6
Sample B Female 676.9
Sample C Male 577.2
Sample D Male 608.5
Pons
nTPM: 570.7
Samples: 4

Max nTPM: 654.2
Min nTPM: 445.0
Sample A Female 445.0
Sample B Female 590.3
Sample C Male 654.2
Sample D Male 593.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 147.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 147.5
Samples: 4

Max nTPM: 166.1
Min nTPM: 124.7
Sample A Male 166.1
Sample B Male 124.7
Sample C Female 150.5
Sample D Female 148.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
77620233 Antisense, RP_070129_03_B08, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.4
77620233 Antisense, RP_070129_03_B08, Mouse strain C57BL/6J (56 days, male) 0.4

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