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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
53.8
nTPM
HPA Brain:
110.2
nTPM
GTEx:
53.8
nTPM
FANTOM5:
49.4
Scaled Tags Per Million
Pig:
43.0
nTPM
Mouse:
42.0
nTPM
Allen mouse:
4.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
110.2
Sample id
Sample description
nTPM
Amygdala nTPM: 72.2
2517
Female, age 94, left hemisphere
88.0
2695
Female, age 67, right hemisphere
74.0
2814
Male, age 76, right hemisphere
71.3
1987
Female, age 91, left hemisphere
69.3
2514
Male, age 75, right hemisphere
58.6
Basal amygdala nTPM: 110.2
2827
Female, age 67, right hemisphere
146.3
2685
Female, age 94, left hemisphere
133.6
2243
Female, age 91, right hemisphere
105.1
2609
Male, age 75, right hemisphere
101.9
2110
Male, age 80, left hemisphere
100.4
1955
Male, age 76, both hemispheres
74.0
Central amygdala nTPM: 90.1
2826
Female, age 94, left hemisphere
109.4
2239
Male, age 80, left hemisphere
102.3
2515
Male, age 75, right hemisphere
85.3
2701
Female, age 91, right hemisphere
84.7
1905
Male, age 76, both hemispheres
68.9
Corticomedial amygdala nTPM: 106.3
2535
Female, age 67, right hemisphere
176.8
2829
Male, age 80, left hemisphere
114.3
2242
Female, age 91, right hemisphere
113.7
2429
Female, age 94, left hemisphere
95.1
2428
Male, age 75, right hemisphere
72.1
2240
Male, age 76, both hemispheres
65.9
Lateral amygdala nTPM: 93.3
2256
Male, age 80, left hemisphere
112.0
2830
Female, age 67, right hemisphere
110.7
2255
Female, age 91, right hemisphere
102.6
2534
Female, age 94, left hemisphere
94.2
1883
Male, age 76, both hemispheres
70.4
2516
Male, age 75, right hemisphere
69.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
53.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 53.8
Samples: 152
Max nTPM: 94.9
Min nTPM: 19.5
Std nTPM: 14.1
Median nTPM: 52.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
94.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
87.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
85.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
84.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
83.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
83.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
82.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
81.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
80.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
79.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
79.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
78.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
77.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
75.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
75.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
75.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
74.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
73.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
72.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
70.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
69.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
69.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
68.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
68.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
67.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
66.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
65.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
65.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
65.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
64.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
63.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
63.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
62.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
62.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
61.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
60.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
60.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
60.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
60.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
59.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
59.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
59.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
58.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
58.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
58.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
58.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
58.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
57.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
57.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
57.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
56.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
56.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
56.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
55.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
55.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
55.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
54.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
54.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
54.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
54.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
54.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
54.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
54.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
54.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
54.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
54.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
53.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
53.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
53.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
53.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
53.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
53.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
53.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
53.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
52.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
52.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
52.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
52.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
51.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
51.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
51.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
51.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
51.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
51.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
51.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
51.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
50.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
50.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
50.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
50.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
50.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
50.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
50.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
49.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
48.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
48.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
48.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
48.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
48.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
48.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
48.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
48.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
48.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
47.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
47.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
47.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
47.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
47.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
46.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
46.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
46.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
46.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
46.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
45.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
45.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
45.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
45.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
45.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
45.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
44.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
44.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
43.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
43.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
43.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
42.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
42.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
42.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
41.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
40.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
40.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
39.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
39.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
38.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
37.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
37.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
36.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
36.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
33.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
31.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
30.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
30.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
29.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
29.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
28.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
28.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
25.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
24.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
21.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
19.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 42.0
Samples: 4
Max nTPM: 45.5
Min nTPM: 39.8
Sample A
Male
42.2
Sample B
Male
39.8
Sample C
Female
45.5
Sample D
Female
40.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
