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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.7 nTPM
HPA Brain:95.4 nTPM
GTEx:54.7 nTPM
FANTOM5:43.1 Scaled Tags Per Million
Pig:44.9 nTPM
Mouse:30.7 nTPM
Allen mouse:2.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044341Antibody CAB026388
Glial cells MediumHigh
Neuronal cells LowMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 95.1
2290 Female, age 72, unknown 119.3
2289 Male, age 61, right hemisphere 112.2
2846 Female, age 79, unknown 98.2
1781 Male, age 74, unknown 96.8
2288 Male, age 75, left hemisphere 90.7
1857 Female, age 85, left hemisphere 88.2
1854 Male, age 80, left hemisphere 83.1
2481 Female, age 94, left hemisphere 72.5
Globus pallidus, externus
nTPM: 69.5
2567 Female, age 72, unknown 86.9
2646 Male, age 61, right hemisphere 79.6
1996 Male, age 80, right hemisphere 67.5
2772 Female, age 79, unknown 57.4
2395 Male, age 75, both hemispheres 56.2
Globus pallidus, internus
nTPM: 67.4
2566 Female, age 72, unknown 85.5
2111 Female, age 85, right hemisphere 70.6
1818 Male, age 74, unknown 66.5
2037 Male, age 80, right hemisphere 64.8
2483 Female, age 94, right hemisphere 63.3
2287 Male, age 75, right hemisphere 62.1
2778 Female, age 91, both hemispheres 58.7
Nucleus accumbens
nTPM: 86.2
1783 Male, age 74, unknown 106.2
2824 Male, age 61, right hemisphere 98.3
2698 Female, age 72, unknown 98.0
1806 Female, age 85, left hemisphere 86.4
1856 Female, age 91, right hemisphere 80.0
2732 Male, age 80, right hemisphere 79.0
2286 Male, age 75, left hemisphere 77.0
2391 Female, age 94, left hemisphere 64.6
Nucleus basalis of Meynert
nTPM: 86.0
2484 Female, age 94, left hemisphere 97.0
2569 Male, age 61, both hemispheres 93.9
2821 Male, age 75, both hemispheres 77.6
2393 Male, age 80, right hemisphere 75.6
Nucleus of the diagonal band
nTPM: 80.6
2195 Female, age 85, both hemispheres 95.3
2029 Male, age 61, right hemisphere 84.3
1979 Male, age 74, unknown 76.6
2775 Male, age 80, right hemisphere 75.1
1812 Female, age 91, both hemispheres 71.8
Putamen
nTPM: 95.4
2647 Male, age 75, left hemisphere 122.6
2489 Female, age 72, unknown 115.8
1829 Male, age 74, unknown 100.8
1838 Male, age 80, right hemisphere 90.2
2466 Female, age 79, unknown 86.7
1937 Female, age 91, right hemisphere 75.7
2482 Female, age 94, left hemisphere 75.7
Septal nuclei
nTPM: 79.8
1960 Male, age 74, unknown 92.4
2629 Female, age 94, right hemisphere 90.6
2059 Female, age 85, both hemispheres 88.1
2394 Male, age 61, left hemisphere 83.1
2031 Female, age 72, unknown 74.2
2009 Female, age 91, both hemispheres 66.9
2199 Male, age 80, right hemisphere 63.4
Stria terminalis, bed nucleus
nTPM: 77.1
2486 Female, age 94, both hemispheres 79.3
2201 Male, age 74, unknown 78.8
1974 Female, age 91, both hemispheres 73.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 46.9
Samples: 246

Max nTPM: 76.7
Min nTPM: 14.7
Std nTPM: 10.5
Median nTPM: 47.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 76.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 73.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 72.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 70.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 70.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 69.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 69.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 67.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 66.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 66.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 65.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 64.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 64.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 62.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 61.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 59.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 59.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 59.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 59.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 59.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 58.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 58.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 57.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 57.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 57.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 57.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 56.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 56.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 56.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 56.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 56.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 56.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 56.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 55.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 55.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 55.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 55.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 55.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 55.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 55.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 54.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 54.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 54.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 54.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 54.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 54.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 54.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 53.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 53.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 53.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 53.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 53.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 52.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 52.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 52.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 52.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 52.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 52.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 51.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 51.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 51.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 51.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 51.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 51.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 51.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 51.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 51.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 50.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 50.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 50.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 50.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 50.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 49.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 49.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 49.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 49.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 49.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 49.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 49.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 49.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 49.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 49.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 49.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 49.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 49.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 49.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 49.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 49.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 49.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 48.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 48.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 48.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 48.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 48.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 48.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 48.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 48.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 48.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 47.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 47.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 47.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 47.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 47.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 47.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 46.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 46.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 46.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 46.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 46.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 46.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 45.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 45.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 45.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 45.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 44.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 44.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 43.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 43.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 43.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 43.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 43.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 43.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 43.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 42.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 42.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 42.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 42.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 42.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 41.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 41.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 41.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 41.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 41.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 41.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 41.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 41.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 40.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 40.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 40.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 40.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 40.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 39.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 39.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 39.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 39.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 39.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 39.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 38.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 38.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 38.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 38.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 37.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 37.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 37.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 37.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 37.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 37.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 37.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 36.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 36.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 36.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 36.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 36.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 36.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 36.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 36.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 35.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 35.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 34.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 34.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 34.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 34.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 34.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 34.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 34.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 34.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 33.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 33.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 32.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 32.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 32.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 32.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 30.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 28.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 27.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 27.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 27.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 25.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 25.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 22.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 22.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 20.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 14.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 54.7
Samples: 246

Max nTPM: 104.8
Min nTPM: 23.0
Std nTPM: 13.0
Median nTPM: 54.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 104.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 91.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 84.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 82.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 80.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 80.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 79.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 79.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 79.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 79.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 78.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 77.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 77.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 76.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 76.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 76.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 75.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 75.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 75.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 73.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 73.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 73.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 72.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 72.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 71.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 71.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 70.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 70.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 70.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 70.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 69.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 69.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 68.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 68.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 68.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 67.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 67.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 67.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 66.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 66.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 66.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 66.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 65.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 65.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 65.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 65.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 65.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 65.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 64.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 64.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 64.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 63.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 63.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 63.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 63.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 63.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 63.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 63.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 63.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 63.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 63.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 63.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 63.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 62.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 62.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 62.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 62.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 62.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 61.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 61.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 61.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 61.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 61.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 61.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 61.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 60.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 60.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 60.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 60.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 60.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 60.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 60.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 59.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 59.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 59.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 59.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 59.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 59.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 59.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 59.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 58.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 58.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 58.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 58.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 57.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 57.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 57.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 57.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 57.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 57.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 57.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 57.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 57.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 56.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 56.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 56.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 56.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 56.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 56.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 55.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 55.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 55.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 55.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 55.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 55.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 54.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 54.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 54.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 54.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 54.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 54.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 54.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 53.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 53.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 53.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 53.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 53.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 53.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 52.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 52.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 52.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 52.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 52.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 52.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 51.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 51.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 51.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 51.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 51.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 51.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 51.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 51.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 50.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 50.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 50.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 50.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 50.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 50.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 50.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 50.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 49.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 49.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 49.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 49.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 48.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 48.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 48.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 48.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 48.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 48.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 48.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 47.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 47.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 47.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 47.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 47.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 47.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 47.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 47.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 47.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 47.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 47.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 47.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 46.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 46.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 46.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 46.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 46.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 46.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 45.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 45.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 45.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 45.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 45.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 45.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 44.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 44.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 44.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 43.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 43.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 43.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 43.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 43.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 42.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 42.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 42.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 42.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 42.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 42.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 42.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 41.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 41.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 41.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 40.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 40.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 40.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 40.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 39.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 39.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 39.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 37.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 37.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 36.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 36.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 36.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 35.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 35.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 34.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 33.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 33.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 33.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 32.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 32.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 32.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 32.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 31.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 31.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 30.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 30.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 29.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 28.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 28.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 28.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 24.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 23.0
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Brain - Putamen (basal ganglia)
Average nTPM: 47.7
Samples: 205

Max nTPM: 74.5
Min nTPM: 21.2
Std nTPM: 9.8
Median nTPM: 47.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 74.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 71.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 69.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 68.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 68.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 67.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 67.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 66.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 65.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 64.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 64.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 64.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 64.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 64.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 63.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 62.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 61.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 61.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 60.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 60.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 60.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 60.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 59.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 59.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 59.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 58.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 58.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 58.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 57.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 57.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 57.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 57.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 57.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 56.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 56.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 56.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 56.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 56.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 55.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 55.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 55.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 55.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 54.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 54.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 54.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 54.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 54.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 54.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 53.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 53.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 53.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 52.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 52.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 52.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 52.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 52.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 52.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 51.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 51.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 51.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 51.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 51.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 51.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 51.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 51.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 51.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 51.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 51.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 50.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 50.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 50.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 50.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 50.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 50.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 50.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 49.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 49.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 49.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 49.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 49.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 49.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 49.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 48.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 48.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 48.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 48.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 48.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 48.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 47.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 47.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 47.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 47.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 47.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 47.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 47.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 47.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 47.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 46.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 46.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 46.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 46.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 46.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 45.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 45.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 45.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 45.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 45.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 45.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 45.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 44.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 44.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 44.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 44.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 44.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 44.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 44.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 43.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 43.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 43.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 43.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 43.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 43.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 42.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 42.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 42.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 42.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 42.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 42.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 42.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 42.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 42.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 41.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 41.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 41.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 41.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 40.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 40.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 40.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 40.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 40.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 40.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 40.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 40.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 39.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 39.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 38.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 38.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 38.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 38.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 38.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 37.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 37.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 37.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 37.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 37.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 36.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 36.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 36.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 36.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 36.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 36.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 36.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 36.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 35.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 35.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 35.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 34.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 34.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 33.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 32.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 32.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 32.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 31.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 31.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 31.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 30.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 30.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 29.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 29.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 27.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 25.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 21.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

43.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 38.3
FF:10164-103B2 76 years, female 38.3
Nucleus accumbens
Scaled Tags Per Million: 31.3
FF:10037-101F1 23-56 years, mixed 31.3
Putamen
Scaled Tags Per Million: 43.1
FF:10176-103C5 60 years, female 43.1
Globus pallidus
Scaled Tags Per Million: 39.0
FF:10161-103A8 76 years, female 51.3
FF:10175-103C4 60 years, female 26.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.9
Pig sample Sample description nTPM
Caudate
nTPM: 44.9
Samples: 4

Max nTPM: 55.8
Min nTPM: 34.8
Sample A Female 34.8
Sample B Female 43.3
Sample C Male 55.8
Sample D Male 45.7
Putamen
nTPM: 43.6
Samples: 4

Max nTPM: 57.5
Min nTPM: 32.0
Sample A Female 32.0
Sample B Female 37.7
Sample C Male 47.3
Sample D Male 57.5
Septum
nTPM: 31.2
Samples: 4

Max nTPM: 35.0
Min nTPM: 24.6
Sample A Female 33.1
Sample B Female 32.2
Sample C Male 35.0
Sample D Male 24.6
Ventral pallidum
nTPM: 40.0
Samples: 4

Max nTPM: 49.5
Min nTPM: 33.5
Sample A Female 33.5
Sample B Female 36.1
Sample C Male 49.5
Sample D Male 40.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 29.5
Samples: 4

Max nTPM: 37.2
Min nTPM: 26.1
Sample A Male 27.1
Sample B Male 37.2
Sample C Female 26.1
Sample D Female 27.4
Septum
nTPM: 27.1
Samples: 4

Max nTPM: 30.1
Min nTPM: 25.3
Sample A Male 30.1
Sample B Male 26.5
Sample C Female 25.3
Sample D Female 26.3
Ventral forebrain
nTPM: 30.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 29.8
Sample A Male 30.0
Sample B Male 32.3
Sample C Female 29.8
Sample D Female 30.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.6
71307244 Antisense, RP_050825_01_E05, Mouse strain C57BL/6J (56 days, male) 2.6
Pallidum
Expression energy: 2.1
71307244 Antisense, RP_050825_01_E05, Mouse strain C57BL/6J (56 days, male) 2.1

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