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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:104.5 nTPM
GTEx:104.5 nTPM
FANTOM5:140.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008874
Squamous epithelial cells Not detected

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 104.5
Samples: 156

Max nTPM: 296.2
Min nTPM: 38.0
Std nTPM: 56.3
Median nTPM: 87.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 296.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 291.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 290.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 278.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 225.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 225.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 222.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 212.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 201.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 200.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 195.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 189.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 187.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 186.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 183.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 180.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 180.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 176.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 176.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 175.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 174.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 172.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 171.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 168.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 167.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 167.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 159.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 159.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 156.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 150.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 150.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 150.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 148.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 147.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 142.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 142.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 140.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 139.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 138.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 135.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 134.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 132.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 132.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 131.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 130.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 130.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 127.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 125.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 125.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 122.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 122.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 120.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 119.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 117.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 112.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 111.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 111.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 111.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 110.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 110.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 109.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 107.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 104.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 102.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 101.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 101.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 100.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 100.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 97.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 96.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 91.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 91.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 90.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 89.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 88.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 88.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 88.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 88.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 87.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 87.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 86.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 85.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 85.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 85.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 84.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 83.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 82.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 82.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 76.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 75.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 75.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 75.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 74.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 74.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 73.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 72.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 72.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 71.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 68.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 68.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 68.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 67.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 67.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 67.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 67.1
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 67.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 65.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 65.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 64.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 63.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 63.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 62.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 62.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 62.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 62.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 61.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 61.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 60.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 60.0
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 59.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 59.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 58.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 57.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 57.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 57.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 56.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 55.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 54.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 54.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 53.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 53.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 52.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 51.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 50.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 50.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 50.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 49.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 48.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 48.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 48.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 48.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 46.5
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 45.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 45.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 45.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 44.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 44.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 43.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 42.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 41.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 41.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 40.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 39.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 38.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 38.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 38.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

140.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 140.2
FF:10204-103F6 68 years, female 140.2

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