HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:66.1 nTPM
HPA Brain:80.2 nTPM
GTEx:66.1 nTPM
FANTOM5:153.6 Scaled Tags Per Million
Pig:114.2 nTPM
Mouse:117.6 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064784
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 80.2
Sample id Sample description nTPM
Hippocampus
nTPM: 71.2
1911 Female, age 85, right hemisphere 80.0
1898 Male, age 80, left hemisphere 77.3
1855 Male, age 76, left hemisphere 75.1
2621 Female, age 67, right hemisphere 72.4
2529 Female, age 94, left hemisphere 64.1
2148 Female, age 91, left hemisphere 58.2
Dentate gyrus
nTPM: 68.3
2530 Female, age 94, left hemisphere 86.0
2010 Male, age 76, both hemispheres 78.5
2528 Male, age 74, both hemispheres 69.8
2246 Female, age 85, both hemispheres 61.7
1927 Female, age 91, both hemispheres 60.8
2531 Female, age 67, both hemispheres 52.7
Entorhinal gyrus
nTPM: 64.1
2117 Female, age 91, right hemisphere 90.5
1938 Female, age 85, left hemisphere 73.2
1787 Male, age 76, left hemisphere 66.1
2764 Male, age 80, right hemisphere 62.5
2613 Female, age 94, left hemisphere 50.1
2686 Male, age 75, right hemisphere 42.5
Hippocampus, CA1
nTPM: 64.4
2527 Male, age 74, both hemispheres 70.6
1873 Female, age 85, both hemispheres 68.0
2045 Male, age 76, both hemispheres 66.4
2082 Female, age 91, right hemisphere 60.1
2749 Male, age 80, left hemisphere 56.9
Hippocampus, CA2
nTPM: 73.7
2249 Male, age 74, both hemispheres 87.1
1940 Female, age 85, left hemisphere 73.8
2437 Female, age 94, left hemisphere 73.0
1963 Male, age 80, left hemisphere 72.5
2113 Female, age 91, right hemisphere 70.8
1892 Male, age 76, both hemispheres 65.3
Hippocampus, CA3
nTPM: 61.4
1891 Female, age 85, both hemispheres 90.3
2436 Male, age 74, both hemispheres 80.3
1867 Male, age 76, both hemispheres 73.0
2137 Male, age 80, left hemisphere 52.1
2620 Female, age 94, left hemisphere 42.5
2861 Female, age 67, both hemispheres 30.4
Parahippocampal cortex
nTPM: 65.1
1850 Male, age 80, both hemispheres 77.9
2532 Female, age 72, left hemisphere 76.7
2018 Male, age 76, both hemispheres 72.6
1990 Female, age 91, right hemisphere 72.2
1933 Female, age 85, both hemispheres 70.9
2692 Male, age 74, both hemispheres 67.3
2245 Female, age 91, both hemispheres 60.8
2250 Female, age 67, right hemisphere 57.1
2693 Female, age 94, both hemispheres 55.9
2622 Female, age 67, right hemisphere 39.2
Perirhinal gyrus
nTPM: 59.8
1841 Female, age 85, right hemisphere 62.4
2521 Female, age 94, right hemisphere 61.1
2848 Male, age 76, right hemisphere 61.0
1794 Male, age 80, right hemisphere 57.9
1847 Female, age 91, left hemisphere 56.7
Subiculum
nTPM: 80.2
2042 Male, age 76, both hemispheres 102.5
1901 Male, age 80, both hemispheres 87.1
2438 Female, age 94, left hemisphere 78.7
1977 Female, age 85, both hemispheres 77.7
2729 Female, age 91, right hemisphere 68.2
2619 Male, age 74, both hemispheres 67.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 66.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.1
Samples: 197

Max nTPM: 159.9
Min nTPM: 22.8
Std nTPM: 28.9
Median nTPM: 58.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 159.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 155.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 147.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 140.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 133.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 130.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 130.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 130.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 129.7
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 127.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 120.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 153.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.6
FF:10153-102I9 76 years, female 167.0
FF:10169-103B7 60 years, female 140.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 114.2
Pig sample Sample description nTPM
Subiculum
nTPM: 69.0
Samples: 4

Max nTPM: 76.0
Min nTPM: 61.9
Sample A Female 76.0
Sample B Female 70.1
Sample C Male 61.9
Sample D Male 67.9
Dorsal hippocampus
nTPM: 114.2
Samples: 4

Max nTPM: 160.1
Min nTPM: 60.7
Sample A Female 160.1
Sample B Female 99.4
Sample C Male 136.5
Sample D Male 60.7
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 79.1
Min nTPM: 51.4
Sample A Female 55.2
Sample B Female 79.1
Sample C Male 64.5
Sample D Male 51.4
Ventral hippocampus
nTPM: 81.5
Samples: 4

Max nTPM: 103.1
Min nTPM: 63.0
Sample A Female 103.1
Sample B Female 63.0
Sample C Male 65.1
Sample D Male 94.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 117.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.5
Samples: 4

Max nTPM: 109.6
Min nTPM: 79.0
Sample A Male 109.6
Sample B Male 104.0
Sample C Female 101.5
Sample D Female 79.0
Hippocampal formation
nTPM: 117.7
Samples: 4

Max nTPM: 128.6
Min nTPM: 109.7
Sample A Male 119.8
Sample B Male 109.7
Sample C Female 128.6
Sample D Female 112.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
69028348 Antisense, RP_050316_01_B05, Mouse strain C57BL/6J (56 days, male) 6.3
72109423 Antisense, RP_050712_03_E09, Mouse strain C57BL/6J (56 days, male) 4.9
70813281 Antisense, RP_050712_03_E09, Mouse strain C57BL/6J (56 days, male) 2.3

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