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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
297.8
nTPM
FANTOM5:
120.0
Scaled Tags Per Million
Allen mouse:
7.8
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
297.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 212.1
2188
Female, age 91, both hemispheres
230.4
2090
Male, age 80, both hemispheres
220.9
2301
Female, age 85, both hemispheres
213.5
1984
Male, age 76, both hemispheres
183.7
Dorsal cochlear nucleus nTPM: 227.3
2370
Male, age 61, both hemispheres
257.8
2187
Female, age 91, both hemispheres
230.6
2058
Male, age 76, both hemispheres
223.9
2802
Male, age 74, right hemisphere
216.5
2378
Male, age 80, both hemispheres
208.0
Dorsal tegmental nucleus nTPM: 262.8
2358
Male, age 61, both hemispheres
325.7
2083
Male, age 80, both hemispheres
266.8
1936
Male, age 76, left hemisphere
231.7
2326
Male, age 74, both hemispheres
227.2
Dorsolateral tegmental area nTPM: 247.2
2360
Male, age 74, both hemispheres
269.6
2337
Male, age 61, both hemispheres
265.8
2654
Male, age 80, both hemispheres
260.7
2751
Female, age 85, both hemispheres
223.3
2141
Male, age 76, both hemispheres
216.5
Kolliker-Fuse nucleus nTPM: 251.3
2315
Male, age 76, right hemisphere
290.4
2163
Male, age 80, both hemispheres
236.5
2793
Female, age 91, left hemisphere
226.9
Lateral lemniscal nuclei nTPM: 203.0
2746
Female, age 85, left hemisphere
246.1
2169
Male, age 76, both hemispheres
217.0
2036
Male, age 80, both hemispheres
198.5
2320
Female, age 91, left hemisphere
187.2
2453
Male, age 74, right hemisphere
166.3
Lateral parabrachial nucleus nTPM: 250.4
2792
Male, age 76, both hemispheres
264.1
2790
Male, age 61, both hemispheres
256.5
2139
Female, age 85, right hemisphere
241.3
2013
Male, age 80, both hemispheres
239.7
Lateral vestibular nucleus nTPM: 235.5
2311
Male, age 80, both hemispheres
253.8
2184
Male, age 76, both hemispheres
217.3
Locus coeruleus nTPM: 297.8
1980
Male, age 76, both hemispheres
317.8
2014
Male, age 55, unknown
316.3
2317
Female, age 72, unknown
310.9
2788
Male, age 74, unknown
309.9
2123
Female, age 91, both hemispheres
309.7
2720
Male, age 74, both hemispheres
270.5
2162
Male, age 80, both hemispheres
249.4
Medial parabrachial nucleus nTPM: 238.9
2170
Female, age 91, both hemispheres
275.5
2156
Male, age 61, both hemispheres
248.3
2854
Male, age 80, both hemispheres
227.2
2786
Male, age 76, both hemispheres
223.1
2463
Female, age 85, right hemisphere
220.2
Medial periolivary nuclei nTPM: 208.6
2063
Male, age 76, both hemispheres
227.9
2171
Female, age 85, both hemispheres
219.2
2791
Male, age 74, right hemisphere
214.9
2081
Male, age 80, both hemispheres
210.0
2458
Female, age 91, both hemispheres
171.0
Motor facial nucleus nTPM: 202.1
2062
Male, age 76, both hemispheres
233.0
2365
Male, age 74, right hemisphere
215.3
2126
Male, age 61, both hemispheres
208.8
2697
Female, age 85, both hemispheres
204.3
2795
Female, age 91, both hemispheres
188.7
2327
Male, age 80, both hemispheres
162.5
Motor trigeminal nucleus nTPM: 204.9
2335
Male, age 61, both hemispheres
229.5
2309
Male, age 76, both hemispheres
223.3
2560
Male, age 74, both hemispheres
203.3
2321
Female, age 91, both hemispheres
186.2
2079
Male, age 80, both hemispheres
182.1
Nuclei of the trapezoid body nTPM: 203.0
1983
Male, age 76, both hemispheres
226.8
2159
Male, age 61, both hemispheres
211.3
2735
Female, age 85, both hemispheres
209.8
2166
Male, age 80, both hemispheres
192.7
2368
Female, age 91, both hemispheres
174.4
Nucleus raphe magnus nTPM: 209.7
2051
Male, age 76, both hemispheres
261.8
2160
Male, age 61, both hemispheres
214.9
2172
Female, age 85, both hemispheres
210.3
2455
Male, age 74, both hemispheres
199.7
2328
Male, age 80, both hemispheres
187.7
2459
Female, age 91, both hemispheres
183.8
Paramedian reticular nucleus nTPM: 247.0
2057
Male, age 80, both hemispheres
275.5
2313
Male, age 61, both hemispheres
246.4
2050
Female, age 85, both hemispheres
238.4
2052
Male, age 76, both hemispheres
227.9
Pedunculopontine tegmental nucleus nTPM: 247.1
2334
Male, age 80, both hemispheres
273.5
2338
Male, age 61, both hemispheres
239.2
1921
Female, age 85, both hemispheres
228.5
Pontine nuclei nTPM: 219.5
2787
Female, age 85, both hemispheres
266.1
1968
Male, age 76, left hemisphere
233.5
2109
Female, age 72, unknown
227.0
2319
Female, age 91, both hemispheres
214.4
2115
Male, age 80, left hemisphere
210.6
2454
Male, age 74, left hemisphere
202.5
2727
Male, age 61, right hemisphere
202.3
1863
Male, age 55, unknown
199.6
Pontine raphe nucleus nTPM: 251.1
2853
Male, age 76, midline
269.2
2122
Female, age 85, midline
233.0
Posteroventral cochlear nucleus nTPM: 232.3
2371
Male, age 61, both hemispheres
261.3
2070
Male, age 76, both hemispheres
233.7
2752
Female, age 85, both hemispheres
229.5
2135
Female, age 91, both hemispheres
223.6
2341
Male, age 80, both hemispheres
213.3
Principal sensory trigeminal nucleus nTPM: 202.4
2324
Male, age 76, both hemispheres
225.4
2158
Male, age 61, both hemispheres
214.5
2008
Male, age 80, left hemisphere
188.5
2367
Female, age 91, left hemisphere
181.4
Reticular pontine nucleus, caudal nTPM: 197.8
2092
Male, age 76, both hemispheres
233.9
2559
Male, age 74, both hemispheres
196.1
2457
Female, age 91, both hemispheres
192.4
2332
Male, age 80, right hemisphere
168.7
Reticular pontine nucleus, oral nTPM: 235.1
1939
Male, age 80, both hemispheres
261.9
2167
Male, age 76, both hemispheres
238.2
2012
Female, age 85, both hemispheres
237.5
2361
Male, age 74, both hemispheres
233.5
2366
Female, age 91, both hemispheres
204.4
Reticulotegmental nucleus nTPM: 213.8
2325
Male, age 76, both hemispheres
215.9
2333
Male, age 80, both hemispheres
215.1
2452
Male, age 74, both hemispheres
212.5
2322
Female, age 91, both hemispheres
211.6
Spinal trigeminal nucleus, oral nTPM: 215.5
1978
Male, age 76, both hemispheres
224.3
2164
Male, age 80, both hemispheres
216.9
2737
Female, age 85, both hemispheres
205.2
Subcoeruleus area nTPM: 222.9
2323
Female, age 91, left hemisphere
234.7
1958
Male, age 80, both hemispheres
231.0
2369
Female, age 85, left hemisphere
228.2
2451
Male, age 74, both hemispheres
225.0
2089
Male, age 76, left hemisphere
195.5
Superior olive nTPM: 209.4
2364
Male, age 74, right hemisphere
230.0
2020
Male, age 76, both hemispheres
224.6
1875
Female, age 85, both hemispheres
220.9
2329
Male, age 80, right hemisphere
187.0
2561
Female, age 91, both hemispheres
184.5
Ventral periolivary nuclei nTPM: 204.7
2023
Male, age 76, both hemispheres
229.8
2130
Female, age 85, both hemispheres
223.9
2165
Male, age 80, both hemispheres
203.1
2794
Female, age 91, left hemisphere
161.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 217.8
2359
Male, age 61, both hemispheres
244.4
2840
Female, age 85, both hemispheres
244.1
2161
Male, age 80, both hemispheres
214.5
1959
Male, age 76, both hemispheres
213.0
2449
Male, age 74, both hemispheres
195.5
2456
Female, age 91, both hemispheres
195.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
