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CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

FTL is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 10840.9
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 8489.4
Number of samples 497
Samples
Sample Description pTPM
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 67606.5
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 49330.3
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 44211.2
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 35458.5
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 31625.0
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 30157.1
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 28545.5
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 28309.4
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 26800.1
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 26592.6
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 23725.4
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 22220.0
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 21637.6
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 21153.9
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 21046.9
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 20859.0
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 20457.0
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 20403.1
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 20370.1
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 19862.5
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 19797.3
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 19611.8
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 19322.3
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 18995.8
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 18659.0
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 18569.3
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 18097.0
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 18059.1
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 17924.6
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 17759.6
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 17608.0
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 17438.0
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 17035.2
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 16524.1
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 16386.3
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 16239.8
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 16236.7
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 16171.0
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 16146.7
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 15907.4
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 15900.8
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 15870.4
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 15822.0
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 15721.7
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 15668.8
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 15612.1
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 15290.1
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 15279.1
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 15226.4
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 15107.1
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 15078.9
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 14945.0
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 14848.2
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 14787.9
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 14744.0
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 14711.6
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 14711.4
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 14305.2
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 14288.1
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 14276.5
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 13841.9
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 13777.2
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 13665.7
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 13613.5
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 13584.7
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 13524.8
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 13484.4
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 13328.3
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 13310.9
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 13303.0
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 13213.2
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 13146.4
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 13142.6
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 13138.3
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 13055.9
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 12940.2
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 12805.9
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 12411.8
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 12213.4
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 12176.9
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 12155.7
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 12154.9
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 12135.0
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 12133.5
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 12114.1
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 11996.5
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 11964.1
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 11781.1
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 11692.2
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 11631.3
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 11459.2
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 11413.4
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 11412.5
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 11388.5
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 11270.6
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 11226.3
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 11147.4
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 11037.1
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 11007.2
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 10982.9
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 10934.4
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 10907.8
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 10774.0
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 10671.6
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 10649.2
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 10525.7
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 10515.3
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 10492.3
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 10472.0
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 10365.5
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 10353.0
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 10347.8
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 10341.1
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 10339.6
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 10301.7
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 10275.5
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 10268.4
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 10196.4
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 10174.6
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 10151.1
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 10145.3
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 10138.3
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 10080.0
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 10052.0
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 9930.0
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 9917.6
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 9901.2
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 9869.1
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 9825.0
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 9799.2
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 9733.0
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 9710.9
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 9710.5
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 9693.8
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 9543.9
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 9467.5
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 9450.7
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 9424.2
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 9375.6
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 9315.5
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 9284.1
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 9213.9
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 9159.8
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 9058.2
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 9053.7
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 9031.6
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 9025.8
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 9019.4
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 9012.8
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 9010.0
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 8958.3
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 8938.7
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 8935.8
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 8920.5
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 8904.2
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 8901.1
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 8875.6
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 8871.1
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 8844.6
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 8841.4
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 8816.6
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 8796.6
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 8779.2
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 8752.8
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 8745.5
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 8726.6
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 8706.8
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 8689.3
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 8683.0
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 8649.1
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 8642.0
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 8638.4
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 8621.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 8616.1
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 8549.8
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 8515.5
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 8504.7
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 8448.0
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 8441.6
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 8428.5
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 8428.1
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 8421.8
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 8381.7
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 8306.7
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 8286.3
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 8280.7
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 8273.2
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 8249.4
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 8230.1
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 8218.1
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 8194.0
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 8165.4
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 8154.8
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 8154.0
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 8151.5
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 8146.5
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 8138.6
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 8138.2
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 8118.1
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 8110.6
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 8100.7
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 8089.5
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 8070.3
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 8060.3
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 8048.0
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 8027.3
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 7991.6
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 7983.2
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 7980.4
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 7968.8
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 7953.4
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 7950.8
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 7904.8
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 7896.5
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 7872.6
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 7868.5
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 7859.2
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 7820.4
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 7722.7
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 7720.8
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 7719.4
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 7716.4
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 7678.1
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 7637.1
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 7631.3
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 7620.0
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 7587.8
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 7536.0
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 7519.8
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 7497.3
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 7452.9
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 7431.8
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 7427.6
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 7423.9
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 7423.6
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 7399.3
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 7381.1
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 7372.8
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 7348.3
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 7315.0
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 7307.6
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 7262.3
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 7245.6
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 7245.2
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 7226.8
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 7184.7
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 7169.7
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 7151.3
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 7147.2
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 7130.7
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 7127.7
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 7108.4
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 6974.5
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 6949.1
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 6946.9
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 6917.7
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 6894.2
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 6862.1
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 6858.9
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 6851.7
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 6822.4
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 6807.5
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 6804.3
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 6799.7
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 6781.8
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 6727.4
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 6707.0
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 6699.8
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 6693.4
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 6682.6
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 6662.0
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 6621.7
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 6596.0
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 6574.1
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 6571.5
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 6559.8
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 6555.7
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 6550.2
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 6542.5
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 6525.8
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 6520.2
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 6495.5
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 6482.3
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 6478.0
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 6341.9
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 6335.7
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 6333.6
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 6315.7
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 6254.0
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 6246.5
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 6236.1
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 6192.3
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 6191.7
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 6188.9
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 6162.0
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 6157.6
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 6146.3
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 6104.0
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 6100.4
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 6095.1
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 6080.7
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 6047.1
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 6043.4
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 6035.5
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 6032.6
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 6030.2
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 6010.5
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 5992.6
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 5981.3
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 5957.5
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 5930.6
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 5884.0
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 5881.8
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 5873.8
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 5871.4
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 5835.6
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 5831.5
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 5781.3
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 5755.6
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 5743.7
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 5688.6
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 5665.5
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 5641.6
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 5630.8
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 5621.4
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 5620.9
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 5619.9
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 5617.3
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 5615.6
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 5593.6
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 5556.0
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 5555.1
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 5554.5
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 5542.6
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 5538.1
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 5531.4
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 5443.5
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 5430.0
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 5424.3
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 5419.4
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 5416.3
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 5361.6
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 5352.5
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 5332.7
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 5299.2
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 5276.4
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 5251.2
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 5223.1
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 5215.9
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 5208.0
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 5199.0
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 5187.3
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 5174.9
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 5160.8
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 5144.4
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 5144.2
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 5091.6
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 5087.4
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 5054.6
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 5053.7
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 5023.3
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 5019.9
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 5008.9
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 4980.2
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 4972.4
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 4947.2
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 4931.6
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 4925.7
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 4924.7
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 4902.2
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 4901.0
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 4880.7
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 4854.4
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 4848.6
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 4825.7
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 4820.9
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 4813.3
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 4804.5
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 4804.4
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 4799.4
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 4798.7
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 4787.0
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 4776.0
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 4768.7
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 4757.7
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 4734.6
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 4724.9
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 4692.4
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 4676.0
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 4668.0
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 4665.4
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 4661.3
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 4654.0
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 4630.2
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 4617.8
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 4592.8
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 4577.1
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 4573.6
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 4557.8
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 4546.6
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 4505.6
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 4494.4
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 4491.1
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 4477.1
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 4458.9
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 4368.3
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 4366.7
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 4318.4
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 4277.3
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 4257.0
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 4254.3
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 4240.2
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 4233.3
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 4222.2
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 4201.9
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 4196.7
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 4181.9
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 4175.1
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 4170.6
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 4170.0
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 4169.0
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 4133.3
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 4124.8
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 4099.4
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 4096.4
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 4012.9
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 3967.6
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 3962.1
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 3922.8
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 3870.6
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 3851.4
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 3833.4
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 3805.1
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 3801.7
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 3780.8
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 3762.8
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 3754.5
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 3722.0
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 3720.8
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 3705.2
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 3677.3
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 3670.6
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 3657.2
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 3635.2
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 3628.5
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 3574.8
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 3568.0
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 3565.8
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 3554.9
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 3537.1
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 3501.3
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 3480.9
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 3477.6
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 3453.3
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 3432.0
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 3430.2
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 3415.2
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 3415.0
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 3352.2
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 3319.5
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 3312.5
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 3310.3
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 3241.6
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 3239.1
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 3204.9
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 3197.2
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 3093.5
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 3079.7
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 3071.9
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 3061.3
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 3031.5
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 3002.9
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 2982.0
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 2962.7
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 2913.4
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 2851.8
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 2835.9
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 2765.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 2688.7
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 2687.0
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 2684.0
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 2633.5
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 2622.2
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 2566.6
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 2556.2
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 2366.5
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 2309.4
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 2292.7
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 2278.0
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 2235.0
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 2080.8
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 2056.9
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 2051.7
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 1753.5
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 1740.7
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 1677.1
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 1334.2
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

FTL is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 8734.13
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6989.9
Number of samples 105
Samples
Sample Description pTPM
L865 75 years, female, stage:Stage IIB, alive, 1927 days 23583.6
L800 66 years, female, stage:Stage IA, dead, 2417 days 16130.5
L617 68 years, male, stage:Stage IIIA, dead, 238 days 15537.3
L728 77 years, male, stage:Stage IIB, dead, 1128 days 13872.0
L871 74 years, male, stage:Stage IB, dead, 873 days 11882.2
L828 68 years, female, stage:Stage IIB, alive, 2222 days 11785.5
L738 74 years, female, stage:Stage IB, dead, 1314 days 11698.4
L808 48 years, female, stage:Stage IA, alive, 3001 days 11582.5
L530 76 years, female, stage:Stage IIA, dead, 308 days 11079.2
L688 57 years, male, stage:Stage IIIA, dead, 789 days 10687.6
L551 62 years, male, stage:Stage IA, alive, 2924 days 10679.4
L473 66 years, female, stage:Stage IA, alive, 3021 days 10615.2
L877 70 years, female, stage:Stage IA, alive, 1599 days 10224.8
L703 71 years, male, stage:Stage IIA, dead, 1137 days 10076.7
L766 59 years, male, stage:Stage IB, alive, 1793 days 10024.9
L545 60 years, female, stage:Stage IA, alive, 2874 days 10000.3
L832 65 years, female, stage:Stage IA, alive, 2145 days 9933.6
L638 65 years, male, stage:Stage IA, alive, 2076 days 9920.6
L599 80 years, male, stage:Stage IB, dead, 2083 days 9638.7
L585 70 years, female, stage:Stage IIA, dead, 402 days 9602.2
L663 62 years, female, stage:Stage IB, alive, 2018 days 9472.6
L656 58 years, male, stage:Stage IA, alive, 2227 days 9423.9
L885 62 years, female, stage:Stage IA, alive, 1618 days 9241.2
L875 69 years, female, stage:Stage IA, alive, 1675 days 9213.4
L887 77 years, male, stage:Stage IA, dead, 374 days 9176.0
L569 76 years, female, stage:Stage IA, alive, 2531 days 8763.9
L829 76 years, male, stage:Stage IA, alive, 2173 days 8734.1
L620 70 years, female, stage:Stage IIIA, dead, 338 days 8724.0
L662 66 years, male, stage:Stage IA, dead, 865 days 8589.6
L400 78 years, male, stage:Stage IIA, dead, 1233 days 8472.4
L802 62 years, female, stage:Stage IA, dead, 773 days 8434.0
L673 74 years, female, stage:Stage IA, dead, 568 days 8303.9
L689 69 years, male, stage:Stage IA, alive, 1943 days 8205.7
L607 59 years, male, stage:Stage IB, alive, 2572 days 8193.4
L413 72 years, female, stage:Stage IIIA, dead, 313 days 8094.4
L613 72 years, male, stage:Stage IIIA, dead, 19 days 7907.5
L605 74 years, female, stage:Stage IA, alive, 2460 days 7874.6
L890 56 years, female, stage:Stage IIB, dead, 1264 days 7743.9
L557 81 years, female, stage:Stage IB, alive, 2580 days 7678.1
L678 65 years, female, stage:Stage IB, dead, 1114 days 7541.3
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 7512.4
L546 57 years, male, stage:Stage IA, dead, 973 days 7505.1
L810 64 years, female, stage:Stage IIIA, dead, 625 days 7214.3
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 7177.1
L683 77 years, female, stage:Stage IIA, dead, 612 days 7141.9
L566 58 years, male, stage:Stage IB, alive, 2489 days 7105.9
L532 69 years, female, stage:Stage IA, dead, 301 days 7091.6
L543 65 years, male, stage:Stage IA, alive, 2711 days 7003.1
L462 67 years, male, stage:Stage IIIA, dead, 568 days 6891.1
L603 70 years, female, stage:Stage IB, dead, 972 days 6665.7
L458 76 years, female, stage:Stage IA, dead, 223 days 6461.0
L446 71 years, female, stage:Stage IIB, dead, 415 days 6445.9
L404 74 years, female, stage:Stage IIA, dead, 2318 days 6439.3
L826 45 years, female, stage:Stage IV, dead, 935 days 6366.3
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 6344.3
L616 54 years, male, stage:Stage IA, dead, 410 days 6327.7
L596 74 years, female, stage:Stage IA, alive, 2319 days 6115.1
L593 78 years, male, stage:Stage IA, dead, 2436 days 5980.6
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 5953.7
L455 52 years, female, stage:Stage IA, alive, 3315 days 5874.4
L484 64 years, female, stage:Stage IA, alive, 2895 days 5850.6
L773 64 years, female, stage:Stage IV, dead, 311 days 5799.6
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 5764.9
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 5634.2
L541 70 years, female, stage:Stage IIIA, dead, 915 days 5625.1
L879 75 years, male, stage:Stage IV, dead, 873 days 5570.2
L827 70 years, male, stage:Stage IIB, dead, 1105 days 5447.3
L626 76 years, female, stage:Stage IA, dead, 1994 days 5416.9
L493 56 years, female, stage:Stage IIB, alive, 2945 days 5299.2
L768 60 years, male, stage:Stage IIIA, dead, 472 days 5235.4
L872 71 years, female, stage:Stage IA, alive, 1793 days 5215.4
L565 59 years, female, stage:Stage IB, dead, 543 days 5203.8
L531 74 years, male, stage:Stage IB, dead, 928 days 5140.9
L850 77 years, male, stage:Stage IIIA, dead, 997 days 5123.3
L682 64 years, female, stage:Stage IIB, dead, 840 days 5043.5
L725 64 years, female, stage:Stage IA, alive, 1830 days 5036.3
L695 68 years, female, stage:Stage IB, dead, 1762 days 5006.5
L873 62 years, female, stage:Stage IA, alive, 1740 days 4987.4
L746 64 years, female, stage:Stage IIIA, dead, 594 days 4564.6
L504 65 years, female, stage:Stage IA, dead, 1295 days 4540.8
L606 55 years, male, stage:Stage IA, alive, 2336 days 4536.8
L831 62 years, female, stage:Stage IB, alive, 2152 days 4486.6
L791 66 years, female, stage:Stage IIIA, dead, 368 days 4468.7
L749 49 years, female, stage:Stage IIIA, dead, 189 days 4462.7
L731 59 years, female, stage:Stage IA, dead, 964 days 4395.3
L816 73 years, female, stage:Stage IIA, dead, 353 days 4359.1
L735 75 years, female, stage:Stage IA, alive, 1830 days 4304.7
L439 80 years, male, stage:Stage IIB, dead, 2773 days 4217.4
L782 73 years, female, stage:Stage IIB, alive, 3371 days 4164.1
L561 62 years, female, stage:Stage IA, alive, 2543 days 4044.4
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 3927.4
L440 80 years, male, stage:Stage IIB, dead, 651 days 3776.3
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 3502.4
L842 62 years, female, stage:Stage IB, alive, 2005 days 3501.6
L838 71 years, female, stage:Stage IA, dead, 1005 days 3255.4
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 2956.5
L778 65 years, female, stage:Stage IA, alive, 1600 days 2948.8
L601 75 years, male, stage:Stage IB, dead, 2068 days 2803.8
L710 72 years, female, stage:Stage IIA, alive, 1775 days 2770.7
L867 62 years, female, stage:Stage IIIA, dead, 317 days 2735.4
L630 65 years, female, stage:Stage IA, dead, 1733 days 2630.3
L880 75 years, female, stage:Stage IA, alive, 1767 days 2274.4
L851 70 years, male, stage:Stage IB, dead, 1315 days 2245.7
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 2211.3
L602 69 years, female, stage:Stage IA, alive, 2277 days 1501.3
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

FTL is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 11554.5
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 8458.9
Number of samples 489
Samples
Sample Description pTPM
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 48959.8
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 44344.1
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 35573.2
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 34274.2
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 30566.1
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 28714.7
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 27989.7
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 27979.4
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 27784.6
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 27614.8
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 25483.5
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 23898.0
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 23762.9
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 23101.6
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 22292.9
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 21535.9
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 21248.4
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 20800.8
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 20273.9
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 20210.7
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 19929.6
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 19891.3
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 19761.0
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 19758.8
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 19521.1
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 19331.0
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 19051.8
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 18682.8
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 18484.4
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 18463.0
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 18436.2
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 17747.7
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 17711.6
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 17695.1
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 17560.9
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 17546.1
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 17185.0
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 17162.9
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 17067.3
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 17063.4
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 17037.6
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 16986.8
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 16930.3
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 16887.2
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 16124.0
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 16094.7
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 15952.5
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 15947.0
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 15915.3
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 15809.7
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 15799.3
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 15746.4
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 15744.9
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 15724.9
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 15658.1
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 15575.5
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 15468.6
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 15445.5
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 15426.0
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 15414.5
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 15103.3
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 15032.8
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 14904.9
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 14784.2
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 14718.1
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 14700.3
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 14651.1
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 14630.9
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 14481.5
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 14469.6
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 14417.5
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 14138.2
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 14036.9
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 14029.8
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 14021.8
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 13908.6
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 13883.0
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 13809.7
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 13658.2
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 13654.4
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 13507.2
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 13483.0
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 13481.0
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 13470.0
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 13463.9
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 13393.5
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 13369.7
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 13235.1
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 13231.0
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 13106.9
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 13095.7
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 13092.4
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 13072.5
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 13027.2
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 12978.2
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 12875.1
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 12874.6
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 12868.5
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 12735.5
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 12676.2
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 12673.2
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 12605.9
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 12595.8
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 12497.9
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 12464.2
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 12426.9
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 12269.0
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 12146.2
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 12023.0
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 11931.3
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 11786.5
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 11732.8
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 11729.4
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 11693.2
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 11655.9
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 11608.6
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 11570.3
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 11538.7
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 11485.7
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 11467.1
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 11437.9
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 11430.3
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 11414.1
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 11322.8
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 11024.5
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 10893.0
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 10837.5
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 10676.3
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 10582.0
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 10579.8
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 10568.1
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 10565.7
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 10525.6
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 10506.2
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 10499.5
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 10495.4
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 10468.4
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 10396.2
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 10321.8
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 10313.9
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 10300.7
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 10295.3
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 10283.7
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 10161.1
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 10114.2
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 10113.3
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 9795.4
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 9757.8
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 9723.3
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 9648.9
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 9578.7
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 9573.9
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 9553.1
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 9445.9
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 9378.3
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 9336.5
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 9239.7
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 9192.9
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 9175.4
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 9082.4
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 9054.7
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 9049.0
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 8867.4
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 8867.3
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 8855.2
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 8824.0
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 8819.1
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 8743.4
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 8742.7
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 8707.1
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 8703.8
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 8660.8
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 8640.9
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 8594.5
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 8538.5
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 8538.2
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 8457.7
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 8380.5
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 8287.4
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 8266.6
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 8249.8
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 8249.1
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 8224.3
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 8219.4
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 8198.2
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 8112.8
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 8082.7
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 8078.3
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 8062.9
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 8012.8
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 7990.2
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 7981.2
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 7940.4
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 7930.7
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 7890.9
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 7849.3
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 7846.0
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 7810.6
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 7798.1
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 7688.6
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 7662.3
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 7652.7
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 7578.6
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 7523.6
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 7511.7
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 7501.4
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 7499.0
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 7478.1
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 7467.5
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 7430.5
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 7399.6
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 7389.0
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 7372.4
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 7364.4
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 7343.1
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 7339.0
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 7311.8
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 7279.8
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 7277.9
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 7268.9
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 7265.4
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 7212.9
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 7169.4
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 7145.4
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 7131.1
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 7103.1
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 7098.3
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 7095.9
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 7093.8
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 7091.2
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 7081.6
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 6995.2
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 6965.0
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 6944.6
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 6933.3
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 6914.4
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 6888.4
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 6843.5
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 6813.5
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 6756.2
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 6732.6
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 6723.3
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 6696.7
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 6634.5
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 6566.4
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 6533.0
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 6530.6
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 6520.1
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 6485.3
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 6476.0
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 6460.8
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 6460.6
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 6453.6
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 6445.2
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 6399.2
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 6392.7
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 6370.7
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 6369.4
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 6305.3
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 6295.8
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 6244.5
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 6238.7
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 6218.9
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 6209.7
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 6197.8
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 6192.4
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 6122.7
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 6099.3
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 6077.9
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 6026.5
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 6021.8
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 6021.3
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 6016.1
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 6012.6
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 6011.5
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 5972.1
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 5965.2
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 5964.1
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 5961.6
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 5902.5
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 5850.6
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 5816.5
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 5796.2
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 5776.9
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 5773.7
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 5772.2
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 5748.6
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 5738.9
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 5716.0
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 5713.7
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 5708.8
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 5692.9
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 5663.5
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 5656.7
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 5630.6
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 5561.3
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 5522.6
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 5519.4
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 5504.5
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 5471.8
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 5443.2
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 5438.6
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 5435.5
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 5427.8
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 5417.3
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 5377.4
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 5365.5
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 5333.5
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 5329.4
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 5324.9
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 5267.9
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 5259.4
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 5251.5
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 5237.4
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 5231.6
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 5227.0
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 5201.7
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 5174.9
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 5157.1
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 5062.1
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 5055.3
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 5041.8
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 5039.4
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 5010.2
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 4987.6
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 4983.1
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 4981.6
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 4954.7
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 4934.0
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 4914.8
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 4907.5
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 4895.0
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 4816.8
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 4792.5
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 4747.7
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 4736.9
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 4720.0
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 4718.1
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 4716.6
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 4709.5
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 4707.7
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 4666.0
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 4624.9
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 4614.1
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 4582.3
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 4580.0
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 4578.1
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 4556.9
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 4556.2
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 4550.7
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 4540.1
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 4520.8
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 4500.1
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 4467.8
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 4458.1
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 4440.7
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 4414.7
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 4399.8
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 4399.0
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 4381.8
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 4361.4
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 4349.8
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 4346.4
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 4344.5
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 4330.1
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 4309.3
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 4284.8
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 4267.9
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 4258.5
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 4256.1
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 4248.1
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 4235.9
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 4185.3
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 4150.0
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 4109.4
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 4076.3
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 4044.8
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 4036.8
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 4010.5
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 3991.0
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3964.7
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 3946.8
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 3914.6
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 3861.2
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 3859.3
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 3846.5
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 3833.3
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 3816.2
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 3792.2
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 3785.7
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 3768.5
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 3747.2
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 3739.3
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 3728.3
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 3717.1
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 3702.6
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 3646.7
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 3602.5
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 3599.9
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 3597.9
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 3570.0
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 3557.8
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 3557.0
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 3554.3
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 3541.0
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 3440.4
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 3435.9
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 3425.7
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 3415.5
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 3412.8
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 3404.8
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 3400.8
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 3388.8
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 3388.7
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 3387.9
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 3377.6
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 3373.9
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 3368.8
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 3342.5
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 3341.4
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 3340.9
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 3330.3
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 3324.1
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 3305.3
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 3291.1
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 3284.9
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 3277.3
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 3271.9
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 3259.6
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 3230.6
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 3225.8
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 3209.2
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 3197.3
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 3195.5
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 3188.8
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 3140.9
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 3139.0
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 3136.1
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 3121.2
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 3110.7
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 3089.9
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 3077.7
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 3071.6
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 3061.7
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 3047.0
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 2998.3
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 2984.9
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 2982.3
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 2970.7
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 2961.6
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 2950.2
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 2949.0
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 2908.8
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 2895.1
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 2886.8
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 2879.1
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 2859.4
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 2855.0
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 2828.8
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 2690.3
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 2655.3
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 2634.6
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 2611.4
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 2515.8
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 2495.5
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 2420.3
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 2406.5
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 2365.7
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 2347.7
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 2316.9
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 2286.9
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 2203.0
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 2172.3
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 2113.0
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 2097.0
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 2044.5
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 1997.4
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 1989.4
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 1958.5
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 1950.7
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 1761.8
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 1743.7
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 1690.0
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 1582.0
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 1524.6
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 1512.6
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 1430.6
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 1419.8
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 1415.9
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

FTL is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4105.66
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6560.2
Number of samples 68
Samples
Sample Description pTPM
L568 77 years, female, stage:Stage IIB, dead, 71 days 26748.1
L857 69 years, male, stage:Stage IB, dead, 226 days 19183.5
L661 66 years, male, stage:Stage IA, dead, 1123 days 17031.8
L539 78 years, male, stage:Stage IB, dead, 370 days 14531.1
L744 75 years, male, stage:Stage IA, alive, 1614 days 13550.8
L712 61 years, male, stage:Stage IA, alive, 1698 days 13175.7
L444 74 years, female, stage:Stage IIB, alive, 3337 days 10709.7
L483 65 years, male, stage:Stage IB, dead, 77 days 10446.8
L860 77 years, male, stage:Stage IA, alive, 2056 days 10044.5
L644 67 years, male, stage:Stage IA, dead, 282 days 9867.6
L852 64 years, male, stage:Stage IB, dead, 700 days 9690.1
L592 61 years, male, stage:Stage IB, alive, 2368 days 9468.3
L739 49 years, female, stage:Stage IIIA, dead, 352 days 9430.5
L488 61 years, female, stage:Stage IIA, alive, 2993 days 9095.5
L559 72 years, male, stage:Stage IIB, alive, 2615 days 8617.5
L753 61 years, male, stage:Stage IIA, alive, 1705 days 8163.0
L633 77 years, female, stage:Stage IA, alive, 2102 days 8057.2
L824 70 years, male, stage:Stage IA, dead, 665 days 7206.8
L756 72 years, male, stage:Stage IB, alive, 1796 days 7171.8
L642 67 years, male, stage:Stage IB, dead, 1167 days 7112.5
L468 53 years, male, stage:Stage IB, alive, 3004 days 7092.4
L496 77 years, male, stage:Stage IB, alive, 2761 days 6771.6
L856 69 years, male, stage:Stage IA, dead, 1465 days 6763.2
L529 79 years, female, stage:Stage IA, alive, 2775 days 6723.0
L723 67 years, male, stage:Stage IIA, dead, 433 days 6490.0
L881 70 years, male, stage:Stage IB, alive, 1752 days 6427.8
L457 46 years, female, stage:Stage IIA, alive, 2901 days 6306.3
L719 63 years, male, stage:Stage IB, alive, 1615 days 6185.8
L886 71 years, male, stage:Stage IB, dead, 1932 days 5996.2
L650 69 years, female, stage:Stage IB, dead, 986 days 5945.9
L534 66 years, male, stage:Stage IIA, alive, 2693 days 5920.0
L586 67 years, male, stage:Stage IIA, dead, 784 days 5822.5
L767 67 years, male, stage:Stage IA, alive, 1718 days 5778.6
L420 57 years, female, stage:Stage IIB, dead, 295 days 5540.5
L818 67 years, male, stage:Stage IB, alive, 2480 days 5347.0
L604 67 years, male, stage:Stage IIA, dead, 286 days 5335.5
L470 78 years, female, stage:Stage IB, dead, 1774 days 5273.7
L858 69 years, female, stage:Stage IIB, dead, 558 days 5215.0
L490 58 years, male, stage:Stage IA, dead, 716 days 5118.7
L685 71 years, female, stage:Stage IIB, alive, 1944 days 4992.3
L466 65 years, female, stage:Stage IIIA, dead, 412 days 4755.5
L715 69 years, female, stage:Stage IIIA, dead, 150 days 4665.5
L655 62 years, male, stage:Stage IIA, dead, 1603 days 4642.8
L755 82 years, male, stage:Stage IIA, dead, 227 days 4269.1
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 4204.9
L472 71 years, male, stage:Stage IB, dead, 423 days 4189.7
L563 61 years, female, stage:Stage IIB, dead, 1216 days 4107.7
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 4103.7
L406 64 years, male, stage:Stage IA, alive, 3057 days 4095.8
L464 66 years, male, stage:Stage IB, dead, 1935 days 3997.0
L788 54 years, female, stage:Stage IA, alive, 3385 days 3813.8
L459 75 years, male, stage:Stage IIA, alive, 3181 days 3804.1
L456 48 years, male, stage:Stage IIA, dead, 1660 days 3714.3
L820 73 years, female, stage:Stage IA, alive, 2405 days 3636.0
L854 62 years, female, stage:Stage IB, alive, 2256 days 3429.8
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 3421.7
L758 84 years, male, stage:Stage IA, dead, 1562 days 3405.9
L442 75 years, female, stage:Stage IB, dead, 2433 days 3243.7
L736 67 years, male, stage:Stage IA, dead, 1195 days 3012.8
L608 73 years, male, stage:Stage IA, alive, 2350 days 2995.4
L747 74 years, female, stage:Stage IA, dead, 1112 days 2973.1
L652 82 years, male, stage:Stage IA, dead, 5 days 2888.9
L864 66 years, female, stage:Stage IA, alive, 2192 days 2672.5
L572 58 years, male, stage:Stage IA, alive, 2532 days 2637.9
L658 65 years, female, stage:Stage IIB, alive, 2083 days 2410.2
L447 67 years, male, stage:Stage IIB, alive, 3203 days 2344.0
L760 80 years, male, stage:Stage IIA, alive, 1895 days 2277.7
L884 71 years, male, stage:Stage IIA, alive, 1627 days 2032.8
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0106100003 Normal 4.1
CPT0070080003 Normal 2.9
CPT0090370003 Normal 2.5
CPT0118010003 Normal 2.4
CPT0118180003 Normal 2.4
CPT0082770003 Normal 2.2
CPT0114690003 Normal 2.0
CPT0051690004 Tumor 2.0
CPT0021450003 Tumor 1.9
CPT0021490003 Normal 1.8
CPT0090600003 Normal 1.8
CPT0118830003 Normal 1.8
CPT0083810003 Normal 1.7
CPT0105610003 Normal 1.6
CPT0105740003 Normal 1.6
CPT0066810003 Normal 1.5
CPT0052170004 Tumor 1.5
CPT0114880003 Normal 1.5
CPT0112080003 Normal 1.5
CPT0001380003 Tumor 1.3
CPT0001690003 Normal 1.3
CPT0067950003 Normal 1.3
CPT0066930003 Normal 1.3
CPT0068830003 Normal 1.3
CPT0008420003 Normal 1.3
CPT0062810003 Normal 1.2
CPT0052940004 Tumor 1.2
CPT0067290003 Normal 1.2
CPT0105370004 Normal 1.2
CPT0105980003 Normal 1.1
CPT0118360003 Normal 1.1
CPT0091260003 Normal 1.1
CPT0105940003 Tumor 1.1
CPT0109710003 Normal 1.0
CPT0090200003 Normal 0.9
CPT0083140003 Normal 0.9
CPT0068130003 Normal 0.9
CPT0070060003 Tumor 0.9
CPT0118650003 Normal 0.8
CPT0013880003 Tumor 0.8
CPT0083780003 Tumor 0.8
CPT0114660004 Tumor 0.8
CPT0066890003 Tumor 0.8
CPT0097600003 Normal 0.7
CPT0001390003 Normal 0.7
CPT0014930003 Normal 0.7
CPT0105600003 Tumor 0.7
CPT0118160003 Tumor 0.7
CPT0069720003 Normal 0.7
CPT0090720003 Normal 0.6
CPT0013910003 Normal 0.6
CPT0117970003 Tumor 0.5
CPT0014860003 Tumor 0.5
CPT0011750003 Normal 0.5
CPT0106110003 Tumor 0.5
CPT0105230003 Tumor 0.5
CPT0001970003 Normal 0.5
CPT0013600003 Tumor 0.5
CPT0092930003 Tumor 0.5
CPT0112060003 Tumor 0.5
CPT0115090003 Normal 0.4
CPT0001660013 Tumor 0.4
CPT0089340003 Tumor 0.4
CPT0013630003 Normal 0.4
CPT0110890003 Normal 0.4
CPT0109760003 Normal 0.4
CPT0114840003 Tumor 0.4
CPT0067110003 Normal 0.3
CPT0091870003 Normal 0.3
CPT0068650003 Normal 0.3
CPT0067250003 Tumor 0.3
CPT0148300003 Normal 0.3
CPT0111300003 Tumor 0.3
CPT0125830003 Normal 0.3
CPT0105270003 Tumor 0.3
CPT0011710004 Tumor 0.3
CPT0114010003 Normal 0.2
CPT0079850003 Normal 0.2
CPT0083100003 Tumor 0.2
CPT0105060003 Tumor 0.2
CPT0118240003 Normal 0.2
CPT0001590003 Normal 0.1
CPT0055100004 Tumor 0.1
CPT0069370003 Normal 0.1
CPT0084140003 Tumor 0.1
CPT0090900004 Normal 0.1
CPT0146680004 Tumor 0.0
CPT0105710003 Tumor 0.0
CPT0098130003 Tumor 0.0
CPT0147100003 Normal 0.0
CPT0069520003 Tumor 0.0
CPT0092940003 Normal 0.0
CPT0067470004 Normal 0.0
CPT0097580003 Tumor 0.0
CPT0105190003 Normal 0.0
CPT0011930003 Normal -0.1
CPT0001960003 Tumor -0.1
CPT0146700003 Normal -0.1
CPT0023310003 Tumor -0.1
CPT0001810003 Normal -0.1
CPT0118620003 Tumor -0.1
CPT0086320003 Normal -0.1
CPT0147400003 Normal -0.1
CPT0008410003 Tumor -0.1
CPT0089360003 Normal -0.1
CPT0118890003 Normal -0.2
CPT0091860003 Tumor -0.2
CPT0067940003 Tumor -0.2
CPT0105330003 Tumor -0.2
CPT0084170003 Normal -0.2
CPT0086770003 Normal -0.2
CPT0104970003 Tumor -0.2
CPT0067620003 Tumor -0.2
CPT0104760003 Normal -0.2
CPT0147500003 Normal -0.3
CPT0069360003 Tumor -0.3
CPT0082740004 Tumor -0.3
CPT0110860004 Tumor -0.3
CPT0109720004 Tumor -0.3
CPT0146800003 Normal -0.3
CPT0113990003 Tumor -0.4
CPT0068800003 Tumor -0.4
CPT0083390004 Tumor -0.4
CPT0015410003 Tumor -0.4
CPT0105680003 Normal -0.4
CPT0092240003 Tumor -0.4
CPT0104750003 Tumor -0.4
CPT0148180004 Tumor -0.4
CPT0090170004 Tumor -0.4
CPT0118600003 Normal -0.5
CPT0066780003 Tumor -0.5
CPT0104650003 Normal -0.5
CPT0091240003 Tumor -0.5
CPT0110980004 Tumor -0.5
CPT0069700003 Tumor -0.5
CPT0118570003 Tumor -0.5
CPT0092250003 Normal -0.5
CPT0001070003 Normal -0.5
CPT0118200003 Tumor -0.5
CPT0118340003 Tumor -0.5
CPT0086310003 Tumor -0.5
CPT0148000003 Normal -0.5
CPT0104630003 Tumor -0.5
CPT0023320003 Normal -0.6
CPT0109740004 Tumor -0.6
CPT0146880004 Tumor -0.6
CPT0111590003 Normal -0.6
CPT0053040004 Tumor -0.6
CPT0113220003 Normal -0.6
CPT0105250003 Normal -0.6
CPT0014290003 Normal -0.6
CPT0147000003 Normal -0.7
CPT0069550003 Normal -0.7
CPT0109700003 Normal -0.7
CPT0118810003 Tumor -0.7
CPT0105550003 Normal -0.7
CPT0147900003 Normal -0.7
CPT0082850004 Tumor -0.7
CPT0147080004 Tumor -0.7
CPT0067450003 Tumor -0.7
CPT0147380004 Tumor -0.7
CPT0148200003 Normal -0.7
CPT0146600003 Normal -0.7
CPT0090570004 Tumor -0.7
CPT0102480003 Normal -0.7
CPT0147880004 Tumor -0.7
CPT0090860003 Tumor -0.7
CPT0068100003 Tumor -0.8
CPT0115070003 Tumor -0.8
CPT0082890003 Normal -0.8
CPT0068610003 Tumor -0.8
CPT0125810003 Tumor -0.8
CPT0001800013 Tumor -0.8
CPT0105010004 Normal -0.9
CPT0111480003 Normal -0.9
CPT0148100003 Normal -0.9
CPT0011910004 Tumor -0.9
CPT0067770003 Normal -0.9
CPT0063810003 Tumor -0.9
CPT0147600003 Normal -0.9
CPT0000930003 Normal -0.9
CPT0109830004 Tumor -0.9
CPT0067070003 Tumor -0.9
CPT0147580004 Tumor -0.9
CPT0148280004 Tumor -0.9
CPT0105510003 Tumor -1.0
CPT0063840003 Normal -1.0
CPT0063750003 Normal -1.0
CPT0105630003 Tumor -1.1
CPT0092530003 Tumor -1.1
CPT0001580009 Tumor -1.1
CPT0109850003 Normal -1.1
CPT0014260003 Tumor -1.1
CPT0015420003 Normal -1.1
CPT0118880003 Tumor -1.1
CPT0109680004 Tumor -1.2
CPT0086750003 Tumor -1.2
CPT0001060010 Tumor -1.2
CPT0147980004 Tumor -1.2
CPT0146980004 Tumor -1.2
CPT0147480004 Tumor -1.2
CPT0146780004 Tumor -1.2
CPT0090700003 Tumor -1.3
CPT0113210003 Tumor -1.3
CPT0079830003 Tumor -1.3
CPT0090340003 Tumor -1.3
CPT0063730003 Tumor -1.4
CPT0102450003 Tumor -1.4
CPT0083420003 Normal -1.5
CPT0000920017 Tumor -1.6
CPT0008450003 Tumor -1.7
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0069900003 Normal 3.0
CPT0227400003 Tumor 2.5
CPT0234950004 Normal 2.3
CPT0227070003 Normal 2.3
CPT0063500003 Normal 2.3
CPT0087210003 Normal 2.2
CPT0205000003 Normal 2.2
CPT0202400004 Normal 2.1
CPT0237990003 Normal 2.1
CPT0245890003 Normal 2.1
CPT0191930003 Normal 2.0
CPT0117770003 Normal 1.9
CPT0192590004 Normal 1.8
CPT0112540003 Tumor 1.8
CPT0197150003 Tumor 1.7
CPT0197090003 Tumor 1.7
CPT0175270003 Normal 1.6
CPT0221220003 Normal 1.4
CPT0245880003 Tumor 1.4
CPT0183270003 Normal 1.4
CPT0068320003 Normal 1.3
CPT0105430003 Normal 1.3
CPT0202580004 Normal 1.2
CPT0007760003 Normal 1.2
CPT0147200003 Normal 1.2
CPT0091620003 Normal 1.2
CPT0130310003 Normal 1.2
CPT0233330003 Normal 1.0
CPT0186140003 Normal 0.9
CPT0117720003 Tumor 0.9
CPT0086270003 Normal 0.9
CPT0104950003 Normal 0.9
CPT0202740003 Normal 0.8
CPT0091090003 Normal 0.8
CPT0233160003 Normal 0.8
CPT0197170003 Normal 0.8
CPT0209510003 Normal 0.8
CPT0190550003 Tumor 0.7
CPT0236420003 Tumor 0.7
CPT0086260003 Tumor 0.6
CPT0237430003 Normal 0.6
CPT0241210003 Normal 0.6
CPT0204990003 Tumor 0.6
CPT0083990003 Normal 0.5
CPT0233600003 Tumor 0.5
CPT0130070003 Normal 0.5
CPT0234580003 Normal 0.5
CPT0146400003 Normal 0.5
CPT0202530004 Tumor 0.5
CPT0126400003 Normal 0.5
CPT0112550003 Normal 0.5
CPT0237080003 Normal 0.4
CPT0197210003 Tumor 0.4
CPT0175560003 Tumor 0.4
CPT0195520003 Normal 0.4
CPT0186210003 Normal 0.4
CPT0236430003 Normal 0.4
CPT0202020008 Tumor 0.4
CPT0089880003 Tumor 0.3
CPT0237710003 Normal 0.3
CPT0098800003 Normal 0.3
CPT0197380003 Normal 0.3
CPT0102840003 Normal 0.3
CPT0208770003 Tumor 0.2
CPT0108600003 Normal 0.2
CPT0197520003 Normal 0.2
CPT0079050003 Tumor 0.2
CPT0202720003 Tumor 0.2
CPT0245780003 Tumor 0.2
CPT0197100003 Normal 0.2
CPT0147700003 Normal 0.2
CPT0202040003 Normal 0.2
CPT0207250003 Normal 0.1
CPT0202220004 Normal 0.1
CPT0104360003 Tumor 0.1
CPT0238110004 Tumor 0.1
CPT0136640003 Tumor 0.1
CPT0123350003 Tumor 0.1
CPT0175260003 Tumor 0.1
CPT0196820003 Normal 0.1
CPT0186130003 Tumor 0.1
CPT0232690003 Normal 0.0
CPT0147180004 Tumor 0.0
CPT0204660003 Normal 0.0
CPT0064050003 Normal 0.0
CPT0187370003 Tumor 0.0
CPT0123370003 Normal 0.0
CPT0217490003 Normal 0.0
CPT0234790003 Tumor 0.0
CPT0223820003 Normal 0.0
CPT0146500003 Normal 0.0
CPT0130030003 Tumor 0.0
CPT0126450003 Tumor -0.1
CPT0202170003 Tumor -0.1
CPT0091050003 Tumor -0.1
CPT0218280003 Tumor -0.1
CPT0197860003 Normal -0.1
CPT0219390003 Normal -0.1
CPT0130440004 Normal -0.1
CPT0007740003 Tumor -0.1
CPT0175160003 Normal -0.1
CPT0112600003 Normal -0.1
CPT0207210003 Tumor -0.1
CPT0227420003 Normal -0.1
CPT0023470003 Tumor -0.2
CPT0219360003 Tumor -0.2
CPT0208780003 Normal -0.2
CPT0237970004 Tumor -0.2
CPT0115830003 Tumor -0.2
CPT0217420003 Tumor -0.2
CPT0091610003 Tumor -0.2
CPT0069890003 Tumor -0.3
CPT0221200003 Tumor -0.3
CPT0191860003 Tumor -0.3
CPT0237060004 Tumor -0.3
CPT0126390003 Tumor -0.3
CPT0187380003 Normal -0.3
CPT0191750003 Normal -0.3
CPT0126810003 Tumor -0.4
CPT0233320003 Tumor -0.4
CPT0186180003 Tumor -0.4
CPT0112580003 Tumor -0.4
CPT0126470003 Normal -0.4
CPT0232670003 Tumor -0.4
CPT0001030003 Normal -0.4
CPT0204800003 Tumor -0.4
CPT0237410004 Tumor -0.4
CPT0245840003 Normal -0.4
CPT0234930004 Tumor -0.4
CPT0238130003 Normal -0.4
CPT0111000004 Normal -0.5
CPT0245790003 Normal -0.5
CPT0104380003 Normal -0.5
CPT0112650003 Tumor -0.5
CPT0104930003 Tumor -0.5
CPT0175120003 Tumor -0.5
CPT0064040003 Tumor -0.5
CPT0068280003 Tumor -0.5
CPT0204820003 Normal -0.5
CPT0237210003 Normal -0.5
CPT0090440003 Tumor -0.5
CPT0108560003 Tumor -0.5
CPT0083980003 Tumor -0.5
CPT0237780003 Normal -0.5
CPT0023500003 Normal -0.5
CPT0209040003 Normal -0.6
CPT0221660003 Normal -0.6
CPT0196810003 Tumor -0.6
CPT0126830003 Normal -0.6
CPT0115860003 Normal -0.6
CPT0098770003 Tumor -0.6
CPT0234560003 Tumor -0.6
CPT0222740003 Normal -0.6
CPT0126740003 Tumor -0.6
CPT0183250004 Tumor -0.7
CPT0091820003 Tumor -0.7
CPT0237690004 Tumor -0.7
CPT0063440003 Normal -0.7
CPT0233640003 Normal -0.7
CPT0126760003 Normal -0.7
CPT0079060003 Normal -0.7
CPT0209020004 Tumor -0.7
CPT0112730003 Normal -0.7
CPT0010060003 Normal -0.7
CPT0241170003 Tumor -0.8
CPT0237570003 Normal -0.8
CPT0112720003 Tumor -0.8
CPT0102790003 Tumor -0.8
CPT0223790003 Tumor -0.8
CPT0202350004 Tumor -0.8
CPT0175390003 Tumor -0.8
CPT0237550004 Tumor -0.8
CPT0227020003 Tumor -0.8
CPT0175410003 Normal -0.8
CPT0128900003 Normal -0.8
CPT0209490003 Tumor -0.8
CPT0079100003 Tumor -0.9
CPT0234820003 Normal -0.9
CPT0136660003 Normal -0.9
CPT0197740003 Tumor -0.9
CPT0112660003 Normal -0.9
CPT0079110003 Normal -0.9
CPT0195510003 Tumor -1.0
CPT0197480003 Tumor -1.0
CPT0191710003 Tumor -1.0
CPT0237200004 Tumor -1.0
CPT0063480003 Tumor -1.0
CPT0204600003 Tumor -1.0
CPT0225470003 Normal -1.0
CPT0221650003 Tumor -1.0
CPT0130410003 Tumor -1.0
CPT0063430003 Tumor -1.0
CPT0130270003 Tumor -1.0
CPT0087190003 Tumor -1.1
CPT0233120003 Tumor -1.1
CPT0218310003 Normal -1.1
CPT0105420003 Tumor -1.1
CPT0146480004 Tumor -1.1
CPT0192540004 Tumor -1.1
CPT0225380003 Tumor -1.1
CPT0101130003 Tumor -1.1
CPT0128890003 Tumor -1.3
CPT0147680004 Tumor -1.3
CPT0111150004 Tumor -1.4
CPT0245830003 Tumor -1.4
CPT0126530003 Tumor -1.4
CPT0126670003 Tumor -1.4
CPT0010050003 Tumor -1.4
CPT0001020003 Tumor -1.5
CPT0222730003 Tumor -1.5
CPT0146380004 Tumor -1.5
CPT0237760003 Tumor -1.6
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA041602

Antibody CAB020769
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS

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