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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

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  • STRUCT & INT

  • FTL
CANCER STOMACH CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
STAD TCGA PROTEIN EXPRESSION
ANTIBODIES
AND
VALIDATION
Dictionary
Stomach cancer
Human cancer
Stomach adenocarcinoma
STOMACH ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

FTL is not prognostic in Stomach Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5560.68
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4887.1
Number of samples 346
Samples
Sample Description pTPM
TCGA-VQ-A8DV-01A 48 years, male, white, stage:Stage IB, dead, 403 days 22990.2
TCGA-BR-7716-01A 62 years, female, white, stage:Stage IIB, alive, 1210 days 18344.6
TCGA-D7-8570-01A 44 years, male, white, stage:Stage IIIB, alive, 752 days 17423.4
TCGA-R5-A7ZR-01A 70 years, female, black or african american, stage:Stage III, dead, 185 days 16853.0
TCGA-D7-6521-01A 65 years, male, white, stage:'--, alive, 564 days 15588.5
TCGA-D7-6520-01A 53 years, male, white, stage:Stage IIIA, alive, 573 days 14846.8
TCGA-D7-A748-01A 41 years, female, white, stage:Stage IV, dead, 132 days 14165.8
TCGA-B7-5818-01A 62 years, male, white, stage:Stage IB, alive, 356 days 12654.8
TCGA-KB-A6F7-01A 54 years, female, stage:Stage IB, alive, 1935 days 11956.6
TCGA-BR-8291-01A 61 years, male, white, stage:Stage IIB, dead, 607 days 11618.6
TCGA-D7-5577-01A 53 years, female, white, stage:Stage IIIA, dead, 782 days 11265.1
TCGA-VQ-A8PK-01A 58 years, male, white, stage:Stage IIIB, dead, 543 days 10820.2
TCGA-BR-7958-01A 60 years, male, white, stage:Stage IIIB, alive, 899 days 10736.4
TCGA-BR-8284-01A 72 years, female, white, stage:Stage IIIC, dead, 245 days 10712.7
TCGA-D7-6525-01A 58 years, male, white, stage:Stage IIIA, dead, 406 days 10517.1
TCGA-CD-8524-01A 61 years, female, asian, stage:Stage II, alive, 388 days 10420.1
TCGA-FP-7735-01A 77 years, male, black or african american, stage:Stage IB, dead, 106 days 10125.0
TCGA-CG-4475-01A 76 years, male, stage:Stage IIB, alive, 699 days 9829.6
TCGA-D7-8576-01A 54 years, female, white, stage:Stage IIIB, dead, 446 days 9688.3
TCGA-VQ-A94O-01A 74 years, male, black or african american, stage:Stage IIIC, dead, 640 days 9455.7
TCGA-D7-A6F0-01A 79 years, female, white, stage:Stage IB, alive, 678 days 9437.0
TCGA-VQ-A8DZ-01A 70 years, male, black or african american, stage:Stage IV, dead, 396 days 9407.1
TCGA-D7-A6EZ-01A 66 years, male, white, stage:Stage IIIA, dead, 618 days 9119.8
TCGA-B7-A5TI-01A 52 years, male, white, stage:Stage IIIC, alive, 595 days 8835.0
TCGA-CD-5813-01A 60 years, male, asian, stage:Stage II, dead, 377 days 8743.2
TCGA-BR-8058-01A 53 years, female, white, stage:Stage IIIB, alive, 1133 days 8685.7
TCGA-RD-A8MW-01A 72 years, male, white, stage:Stage IIIB, dead, 1153 days 8535.2
TCGA-BR-7196-01A 64 years, male, white, stage:Stage IV, alive, 666 days 8425.2
TCGA-BR-4191-01A 72 years, male, white, stage:'--, dead, 558 days 8308.6
TCGA-CG-5718-01A 78 years, female, stage:Stage II, dead, 1095 days 8238.2
TCGA-BR-8589-01A 56 years, male, white, stage:Stage IIIB, alive, 825 days 7942.6
TCGA-BR-6453-01A 54 years, male, white, stage:Stage IIA, alive, 485 days 7903.1
TCGA-D7-8578-01A 72 years, male, white, stage:Stage IB, alive, 643 days 7882.2
TCGA-BR-4256-01A 80 years, male, white, stage:'--, dead, 284 days 7829.1
TCGA-SW-A7EB-01A 45 years, male, white, stage:Stage IIIA, alive, 176 days 7822.3
TCGA-BR-7901-01A 74 years, male, white, stage:Stage IIB, dead, 105 days 7781.3
TCGA-BR-6565-01A 67 years, male, white, stage:Stage IIB, dead, 279 days 7709.1
TCGA-HU-8244-01A 77 years, female, asian, stage:Stage IA, alive, 742 days 7624.0
TCGA-BR-6566-01A 64 years, female, white, stage:Stage IIA, alive, 997 days 7435.0
TCGA-ZA-A8F6-01A 71 years, male, white, stage:Stage IB, alive, 525 days 7345.7
TCGA-HU-8604-01A 82 years, female, asian, stage:Stage IIA, alive, 694 days 7293.0
TCGA-VQ-A8PH-01A 62 years, male, white, stage:Stage IIIB, dead, 389 days 7270.4
TCGA-BR-8487-01A 64 years, female, white, stage:Stage IIA, alive, 34 days 7268.8
TCGA-D7-5578-01A 80 years, male, white, stage:Stage IIIA, alive, 385 days 7246.7
TCGA-D7-6522-01A 58 years, male, white, stage:Stage IB, alive, 566 days 7203.0
TCGA-BR-8081-01A 71 years, female, white, stage:Stage IIB, alive, 981 days 7117.9
TCGA-VQ-A8E0-01A 68 years, male, black or african american, stage:Stage IIIA, dead, 562 days 7089.4
TCGA-CD-5799-01A 45 years, male, asian, stage:Stage II, alive, 396 days 7062.1
TCGA-CG-4437-01A 83 years, male, stage:Stage II, alive, 245 days 7061.0
TCGA-CD-A48A-01A 57 years, male, asian, stage:Stage IIA, alive, 378 days 7042.4
TCGA-HU-8608-01A 70 years, male, asian, stage:Stage IIIB, alive, 641 days 7026.9
TCGA-CD-5800-01A 51 years, female, asian, stage:Stage II, alive, 400 days 6999.7
TCGA-BR-8381-01A 51 years, male, white, stage:Stage IIB, alive, 224 days 6905.1
TCGA-BR-6458-01A 57 years, female, white, stage:Stage IIB, dead, 588 days 6894.7
TCGA-KB-A93J-01A 78 years, male, white, stage:Stage II, alive, 1124 days 6884.7
TCGA-IN-A6RL-01A 84 years, male, white, stage:'--, dead, 406 days 6743.3
TCGA-BR-8590-01A 62 years, male, white, stage:Stage IIIC, dead, 284 days 6740.9
TCGA-D7-8575-01A 75 years, male, white, stage:Stage IIIA, dead, 554 days 6731.4
TCGA-BR-6707-01A 75 years, male, white, stage:Stage IIA, dead, 605 days 6638.2
TCGA-VQ-A8PM-01A 56 years, male, white, stage:Stage IV, dead, 57 days 6610.1
TCGA-BR-6803-01A 54 years, female, white, stage:Stage IIA, alive, 949 days 6547.4
TCGA-BR-7723-01A 59 years, male, white, stage:Stage IIIB, dead, 874 days 6536.2
TCGA-CD-A48C-01A 79 years, female, asian, stage:Stage IIB, dead, 353 days 6532.2
TCGA-CD-8529-01A 65 years, male, asian, stage:Stage IV, alive, 374 days 6415.8
TCGA-BR-8289-01A 57 years, male, white, stage:Stage IV, dead, 81 days 6410.0
TCGA-CD-A4MH-01A 86 years, female, asian, stage:Stage IIA, alive, 371 days 6372.3
TCGA-CD-A487-01A 51 years, male, asian, stage:Stage IIB, alive, 374 days 6336.7
TCGA-HU-A4HD-01A 73 years, male, asian, stage:Stage IIIA, alive, 1016 days 6290.3
TCGA-D7-6818-01A 53 years, male, white, stage:Stage IIIA, dead, 376 days 6260.2
TCGA-VQ-A91K-01A 69 years, male, white, stage:Stage IIIA, alive, 1862 days 6254.0
TCGA-FP-A4BF-01A 68 years, male, white, stage:Stage IIIA, dead, 168 days 6217.8
TCGA-HU-A4H0-01A 72 years, male, asian, stage:Stage IIIC, alive, 64 days 6195.7
TCGA-BR-7717-01A 63 years, male, white, stage:Stage IV, dead, 552 days 6155.0
TCGA-BR-7715-01A 65 years, male, white, stage:Stage IIA, alive, 1023 days 6078.3
TCGA-BR-8484-01A 61 years, male, white, stage:Stage IIIA, dead, 766 days 6055.9
TCGA-CD-5798-01A 82 years, male, asian, stage:Stage II, alive, 408 days 6055.7
TCGA-BR-6457-01A 69 years, male, white, stage:Stage IIA, alive, 416 days 5987.0
TCGA-EQ-8122-01A 71 years, female, white, stage:Stage IIB, dead, 243 days 5928.6
TCGA-FP-7998-01A 77 years, male, white, stage:Stage IIIC, alive, 678 days 5925.0
TCGA-CD-8527-01A 72 years, female, asian, stage:Stage II, dead, 218 days 5892.2
TCGA-HU-A4H6-01A 72 years, female, asian, stage:Stage IIIA, alive, 644 days 5890.7
TCGA-CG-5719-01A 54 years, female, stage:Stage IV, alive, 31 days 5853.4
TCGA-CD-5801-01A 69 years, male, asian, stage:Stage IIIA, dead, 401 days 5832.2
TCGA-BR-8485-01A 68 years, female, white, stage:Stage IIIC, alive, 280 days 5799.1
TCGA-BR-8366-01A 80 years, female, white, stage:Stage IIA, alive, 29 days 5793.9
TCGA-CD-8526-01A 73 years, female, asian, stage:Stage IIIA, alive, 381 days 5775.0
TCGA-RD-A7C1-01A 82 years, male, white, stage:Stage IB, dead, 507 days 5774.8
TCGA-RD-A7BT-01A 66 years, male, native hawaiian or other pacific islander, stage:Stage IV, dead, 262 days 5715.7
TCGA-CG-4438-01A 56 years, male, stage:Stage IV, alive, 1645 days 5687.6
TCGA-BR-8690-01A 54 years, female, white, stage:Stage IIIB, alive, 325 days 5667.1
TCGA-VQ-A8PF-01A 76 years, male, stage:Stage IIIB, dead, 76 days 5651.9
TCGA-BR-7704-01A 69 years, female, white, stage:Stage II, alive, 1072 days 5593.2
TCGA-BR-8059-01A 72 years, male, white, stage:Stage III, dead, 439 days 5584.8
TCGA-CG-4440-01A 68 years, female, stage:Stage IV, dead, 122 days 5579.3
TCGA-VQ-A94T-01A 73 years, male, stage:Stage IIIB, dead, 342 days 5570.9
TCGA-CD-8530-01A 51 years, male, asian, stage:Stage II, alive, 377 days 5550.5
TCGA-RD-A8N9-01A 63 years, female, asian, stage:Stage II, alive, 1083 days 5546.1
TCGA-VQ-AA6J-01A 75 years, male, black or african american, stage:Stage IIIB, alive, 838 days 5518.1
TCGA-FP-7916-01A 77 years, male, asian, stage:Stage IIIC, dead, 428 days 5482.3
TCGA-D7-6526-01A 67 years, female, white, stage:Stage IIIA, alive, 523 days 5468.5
TCGA-FP-7829-01A 69 years, male, white, stage:Stage IIB, alive, 594 days 5461.8
TCGA-BR-8367-01A 55 years, male, white, stage:Stage IIIB, dead, 801 days 5391.6
TCGA-VQ-A91A-01A 67 years, male, white, stage:Stage IIIB, alive, 1200 days 5354.3
TCGA-BR-8364-01A 42 years, female, white, stage:Stage IIIC, alive, 675 days 5334.6
TCGA-CD-8528-01A 43 years, female, asian, stage:Stage IIIA, alive, 375 days 5253.4
TCGA-D7-8572-01A 57 years, male, white, stage:Stage IIB, alive, 511 days 5222.7
TCGA-BR-4253-01A 80 years, female, white, stage:Stage IIIA, dead, 124 days 5197.5
TCGA-FP-8210-01A 48 years, male, asian, stage:Stage IIIA, dead, 153 days 5167.7
TCGA-CG-5723-01A 83 years, male, stage:Stage II, alive, 2496 days 5163.2
TCGA-BR-8295-01A 60 years, female, white, stage:Stage IIB, dead, 67 days 5163.0
TCGA-CG-5721-01A 58 years, male, stage:Stage IV, alive, 183 days 5162.1
TCGA-CD-8531-01A 66 years, female, asian, stage:Stage IIIA, alive, 383 days 5157.1
TCGA-F1-A448-01A 70 years, male, white, stage:Stage IIIB, alive, 647 days 5150.3
TCGA-RD-A8N6-01A 78 years, female, white, stage:Stage IIIA, dead, 272 days 5115.2
TCGA-VQ-A91V-01A 58 years, male, stage:Stage IIIA, alive, 1297 days 5114.5
TCGA-BR-4267-01A 51 years, male, white, stage:Stage IB, dead, 188 days 5100.8
TCGA-BR-7957-01A 50 years, female, white, stage:Stage IV, dead, 276 days 5083.5
TCGA-CD-8525-01A 82 years, female, asian, stage:Stage IIIA, alive, 383 days 5051.8
TCGA-D7-A6F2-01A 62 years, male, white, stage:Stage IB, alive, 476 days 5049.3
TCGA-FP-A8CX-01A 60 years, male, white, stage:Stage IIIC, alive, 7 days 5039.1
TCGA-3M-AB46-01A 70 years, male, white, stage:Stage IB, alive, 1765 days 5038.9
TCGA-VQ-A91Y-01A 67 years, male, white, stage:Stage IIIC, dead, 296 days 4991.8
TCGA-VQ-A94R-01A 63 years, male, white, stage:'--, dead, 1294 days 4983.0
TCGA-BR-4257-01A 79 years, female, white, stage:'--, dead, 294 days 4980.5
TCGA-B7-A5TN-01A 60 years, male, white, stage:Stage IIB, alive, 287 days 4947.0
TCGA-BR-8683-01A 75 years, male, asian, stage:Stage IIIB, dead, 300 days 4928.8
TCGA-HU-A4H5-01A 71 years, male, asian, stage:Stage IB, alive, 724 days 4909.5
TCGA-VQ-A8DT-01A 43 years, male, stage:Stage IIIB, alive, 1484 days 4908.0
TCGA-BR-4187-01A 56 years, male, white, stage:'--, dead, 141 days 4901.2
TCGA-VQ-A8P5-01A 67 years, male, white, stage:Stage IIA, dead, 235 days 4892.0
TCGA-HU-A4G2-01A 45 years, male, asian, stage:Stage IIB, alive, 739 days 4885.8
TCGA-D7-6822-01A 77 years, male, white, stage:Stage IB, alive, 375 days 4884.7
TCGA-BR-6563-01A 60 years, male, white, stage:Stage IIB, alive, 1190 days 4878.1
TCGA-BR-6456-01A 74 years, female, white, stage:Stage IIB, dead, 526 days 4875.4
TCGA-HF-7133-01A female, stage:Stage IV, alive, 1918 days 4843.9
TCGA-CD-5803-01A 78 years, female, asian, stage:Stage II, dead, 341 days 4836.8
TCGA-IN-A7NU-01A 69 years, male, white, stage:Stage IIIB, alive, 356 days 4833.8
TCGA-VQ-A8P2-01A 68 years, male, white, stage:Stage IIIA, alive, 1160 days 4827.1
TCGA-BR-6452-01A 78 years, female, white, stage:Stage IIA, alive, 1055 days 4819.0
TCGA-F1-6874-01A 79 years, male, white, stage:Stage IB, alive, 440 days 4808.7
TCGA-BR-8588-01A 55 years, female, white, stage:Stage IIB, alive, 389 days 4784.3
TCGA-HU-8249-01A 76 years, male, asian, stage:Stage IIIA, alive, 881 days 4783.8
TCGA-HU-8610-01A 75 years, male, asian, stage:Stage IA, alive, 23 days 4770.8
TCGA-BR-4279-01A 43 years, male, white, stage:Stage II, dead, 291 days 4760.8
TCGA-KB-A93G-01A 68 years, male, white, stage:Stage IB, alive, 613 days 4754.9
TCGA-IN-A6RR-01A 84 years, male, white, stage:'--, dead, 205 days 4754.6
TCGA-CG-4305-01A 69 years, male, stage:Stage II, alive, 485 days 4737.4
TCGA-VQ-A8PC-01A 65 years, male, white, stage:Stage IIIA, dead, 1407 days 4735.2
TCGA-BR-A4PF-01A 72 years, male, white, stage:Stage IIIB, alive, 35 days 4732.9
TCGA-BR-8686-01A 69 years, male, asian, stage:Stage IIIB, dead, 635 days 4732.1
TCGA-HU-A4GY-01A 76 years, female, asian, stage:Stage IIIA, alive, 8 days 4727.3
TCGA-BR-6455-01A 59 years, male, white, stage:Stage IIB, dead, 422 days 4721.2
TCGA-HU-A4GD-01A 56 years, male, asian, stage:Stage IIB, alive, 692 days 4696.8
TCGA-F1-A72C-01A 68 years, male, asian, stage:Stage IIA, alive, 346 days 4692.7
TCGA-MX-A663-01A 66 years, male, white, stage:Stage IIA, dead, 300 days 4659.8
TCGA-D7-A6EV-01A 71 years, female, white, stage:Stage IIB, alive, 342 days 4644.8
TCGA-VQ-AA6K-01A 59 years, male, white, stage:Stage IIIC, dead, 378 days 4643.3
TCGA-FP-8099-01A 79 years, male, white, stage:Stage IIA, alive, 519 days 4620.0
TCGA-HU-A4HB-01A 68 years, male, asian, stage:Stage IIB, dead, 477 days 4618.5
TCGA-FP-8631-01A 68 years, male, white, stage:Stage IIIA, alive, 17 days 4616.3
TCGA-CD-8533-01A 48 years, male, asian, stage:Stage II, alive, 468 days 4554.8
TCGA-CG-4441-01A 83 years, male, stage:Stage IIIA, dead, 426 days 4535.8
TCGA-D7-A4YX-01A 63 years, male, white, stage:Stage IIB, alive, 1108 days 4519.7
TCGA-RD-A8N1-01A 70 years, male, white, stage:Stage IIIB, alive, 3519 days 4506.0
TCGA-BR-8080-01A 72 years, female, white, stage:Stage IIIC, dead, 292 days 4497.5
TCGA-BR-8677-01A 74 years, female, white, stage:Stage IIIB, alive, 813 days 4497.4
TCGA-BR-6709-01A 57 years, female, white, stage:Stage IIIB, dead, 370 days 4495.6
TCGA-BR-6564-01A 46 years, female, white, stage:Stage IIIA, dead, 794 days 4489.1
TCGA-B7-A5TK-01A 51 years, male, white, stage:Stage IIIA, alive, 288 days 4478.2
TCGA-CD-8532-01A 52 years, male, asian, stage:Stage II, dead, 354 days 4467.4
TCGA-IN-A6RI-01A 45 years, male, white, stage:Stage I, alive, 559 days 4453.4
TCGA-BR-7851-01A 74 years, male, white, stage:Stage IIB, dead, 574 days 4423.8
TCGA-D7-6815-01A 70 years, female, white, stage:Stage IIB, alive, 486 days 4385.4
TCGA-R5-A7ZI-01A 44 years, female, white, stage:Stage IV, alive, 2267 days 4365.7
TCGA-D7-6524-01A 53 years, male, white, stage:Stage II, alive, 543 days 4352.3
TCGA-BR-8680-01A 45 years, male, asian, stage:Stage IV, alive, 972 days 4333.2
TCGA-BR-8372-01A 63 years, male, white, stage:Stage IIIC, alive, 951 days 4314.9
TCGA-CD-A486-01A 68 years, male, asian, stage:Stage IIA, dead, 192 days 4291.7
TCGA-VQ-AA6F-01A 57 years, male, white, stage:Stage IIB, alive, 1646 days 4291.1
TCGA-IN-7806-01A 50 years, male, white, stage:Stage IIB, alive, 1106 days 4266.2
TCGA-RD-A7BW-01A 68 years, female, white, stage:Stage IB, dead, 156 days 4242.2
TCGA-BR-7197-01A 69 years, male, white, stage:Stage II, alive, 280 days 4199.5
TCGA-BR-8369-01A 76 years, female, white, stage:Stage IIIB, alive, 427 days 4199.4
TCGA-IN-A6RS-01A 76 years, male, white, stage:Stage IA, alive, 383 days 4197.5
TCGA-RD-A8N5-01A 78 years, male, white, stage:Stage IIIA, dead, 1747 days 4190.4
TCGA-BR-8591-01A 79 years, male, white, stage:Stage IIIC, alive, 856 days 4174.6
TCGA-BR-8382-01A 67 years, female, white, stage:Stage IIIC, dead, 762 days 4171.9
TCGA-BR-7722-01A 62 years, male, white, stage:Stage IIB, dead, 466 days 4132.2
TCGA-CG-5722-01A 67 years, female, stage:Stage IV, alive, 30 days 4110.8
TCGA-IN-A7NR-01A 64 years, female, white, stage:Stage IV, alive, 198 days 4103.2
TCGA-BR-8373-01A 65 years, female, white, stage:Stage IIIA, alive, 450 days 4098.3
TCGA-RD-A8MV-01A 56 years, male, white, stage:Stage IIIB, alive, 3720 days 4082.8
TCGA-CG-5724-01A 59 years, male, stage:Stage IV, dead, 366 days 4080.0
TCGA-BR-6705-01A 68 years, female, white, stage:Stage IIIB, dead, 779 days 4079.7
TCGA-CG-4436-01A 57 years, male, stage:Stage IB, alive, 243 days 4076.6
TCGA-BR-6802-01A 65 years, male, white, stage:Stage IIIA, alive, 940 days 4070.8
TCGA-CG-5732-01A 66 years, male, stage:Stage IV, dead, 2100 days 4065.8
TCGA-VQ-A8PE-01A 78 years, male, white, stage:Stage IIIB, dead, 675 days 4055.2
TCGA-BR-8296-01A 58 years, female, white, stage:Stage IIIC, dead, 474 days 4041.9
TCGA-BR-8297-01A 58 years, male, white, stage:Stage IIIC, alive, 225 days 3991.7
TCGA-CG-5734-01A 68 years, male, stage:Stage IIIA, dead, 243 days 3987.8
TCGA-BR-8365-01A 70 years, female, white, stage:Stage IIA, dead, 533 days 3987.0
TCGA-CD-8534-01A 41 years, male, asian, stage:Stage II, alive, 367 days 3949.7
TCGA-BR-6852-01A 64 years, female, white, stage:Stage IIA, alive, 1367 days 3931.2
TCGA-MX-A666-01A 61 years, male, white, stage:Stage IIA, alive, 427 days 3920.2
TCGA-BR-A4J7-01A 49 years, male, asian, stage:Stage IIB, alive, 989 days 3918.1
TCGA-D7-A6EY-01A 72 years, female, white, stage:Stage IIIB, dead, 348 days 3888.0
TCGA-VQ-A91S-01A 63 years, male, black or african american, stage:Stage IIIB, alive, 1000 days 3881.7
TCGA-HU-8602-01A 58 years, female, asian, stage:Stage IIB, alive, 679 days 3878.0
TCGA-CG-4301-01A 75 years, female, stage:Stage IV, alive, 92 days 3872.4
TCGA-FP-A9TM-01A 77 years, male, white, stage:'--, alive, 189 days 3843.8
TCGA-BR-6801-01A 70 years, male, white, stage:Stage IIA, alive, 1223 days 3832.0
TCGA-BR-8060-01A 75 years, female, white, stage:Stage IIB, dead, 348 days 3823.8
TCGA-CD-8535-01A 59 years, male, asian, stage:Stage IIIA, alive, 390 days 3792.1
TCGA-D7-8574-01A 72 years, male, white, stage:Stage IIIA, alive, 523 days 3767.8
TCGA-VQ-A8PO-01A 74 years, male, white, stage:Stage IIB, dead, 282 days 3766.8
TCGA-HU-A4H3-01A 56 years, female, asian, stage:Stage IIIC, alive, 882 days 3765.6
TCGA-CG-5720-01A 71 years, male, stage:Stage IB, dead, 30 days 3758.9
TCGA-MX-A5UJ-01A 86 years, female, white, stage:Stage IIIA, alive, 600 days 3736.2
TCGA-HU-A4GF-01A 69 years, male, asian, stage:Stage IIA, alive, 785 days 3726.1
TCGA-F1-6875-01A 79 years, male, black or african american, stage:Stage IA, dead, 2197 days 3714.8
TCGA-BR-8682-01A 52 years, male, asian, stage:Stage IIB, alive, 991 days 3710.8
TCGA-BR-8286-01A 49 years, male, white, stage:Stage II, alive, 895 days 3685.3
TCGA-HF-7134-01A male, stage:Stage IA, alive, 1588 days 3684.9
TCGA-D7-A4YU-01A 73 years, male, white, stage:Stage IIIB, alive, 500 days 3682.9
TCGA-HF-A5NB-01A 75 years, female, stage:Stage IIIC, alive, 928 days 3669.2
TCGA-BR-8368-01A 84 years, female, white, stage:Stage IB, alive, 131 days 3634.0
TCGA-BR-8384-01A 69 years, male, white, stage:Stage IIIC, alive, 113 days 3628.3
TCGA-BR-8687-01A 67 years, female, white, stage:Stage IIIC, dead, 250 days 3619.6
TCGA-HU-A4GX-01A 70 years, female, asian, stage:Stage IIIC, alive, 616 days 3569.6
TCGA-VQ-AA68-01A 52 years, female, white, stage:Stage IIIC, alive, 1328 days 3561.4
TCGA-CG-4469-01A 70 years, male, stage:Stage IV, dead, 215 days 3561.2
TCGA-VQ-A8E2-01A 57 years, male, asian, stage:Stage IIIB, alive, 1319 days 3523.1
TCGA-CG-4465-01A 69 years, female, stage:Stage IV, dead, 274 days 3514.1
TCGA-ZQ-A9CR-01A 79 years, female, white, stage:Stage IIIC, dead, 24 days 3513.3
TCGA-BR-4201-01A 66 years, female, white, stage:'--, dead, 940 days 3504.1
TCGA-IN-A7NT-01A 73 years, female, white, stage:Stage IIB, alive, 323 days 3464.7
TCGA-BR-A4J5-01A 56 years, male, asian, stage:Stage IIIA, alive, 862 days 3432.9
TCGA-BR-7959-01A 59 years, male, white, stage:Stage IIIA, alive, 1010 days 3425.7
TCGA-BR-8380-01A 55 years, male, white, stage:Stage IIIC, dead, 21 days 3402.1
TCGA-VQ-A8DU-01A 63 years, male, white, stage:Stage IIIA, dead, 166 days 3401.5
TCGA-VQ-A8PU-01A 72 years, female, white, stage:Stage IIIA, dead, 832 days 3399.8
TCGA-VQ-A91Q-01A 61 years, male, stage:Stage IV, dead, 633 days 3390.4
TCGA-RD-A8NB-01A 80 years, female, white, stage:Stage IIIA, dead, 513 days 3376.4
TCGA-VQ-A8PQ-01A 50 years, female, white, stage:Stage IV, dead, 476 days 3332.9
TCGA-BR-8077-01A 58 years, female, white, stage:Stage IIIB, alive, 21 days 3332.5
TCGA-MX-A5UG-01A 78 years, male, asian, stage:Stage IIIA, dead, 113 days 3317.6
TCGA-VQ-AA64-01A 68 years, male, white, stage:Stage IIIB, dead, 560 days 3300.0
TCGA-HU-A4GC-01A 74 years, male, asian, stage:Stage IIIB, alive, 99 days 3252.9
TCGA-BR-A44U-01A 70 years, male, white, stage:Stage IIIB, dead, 422 days 3242.0
TCGA-VQ-A94P-01A 57 years, male, white, stage:'--, dead, 81 days 3226.3
TCGA-VQ-A8PD-01A 69 years, male, white, stage:Stage IIIC, dead, 496 days 3220.1
TCGA-VQ-A8PJ-01A 53 years, male, stage:Stage IV, dead, 82 days 3218.8
TCGA-VQ-A94U-01A 70 years, male, white, stage:Stage IIB, alive, 819 days 3215.2
TCGA-VQ-A8PX-01A 51 years, male, stage:Stage IA, alive, 1964 days 3208.8
TCGA-CD-A4MG-01A 76 years, male, asian, stage:Stage IIA, dead, 200 days 3207.4
TCGA-VQ-AA6A-01A 56 years, male, white, stage:Stage IIIC, alive, 1184 days 3196.8
TCGA-IN-A6RN-01A 72 years, female, white, stage:Stage IIA, alive, 594 days 3192.9
TCGA-D7-6528-01A 70 years, female, white, stage:Stage IB, alive, 463 days 3191.1
TCGA-VQ-A8PB-01A 65 years, female, white, stage:Stage II, dead, 1043 days 3184.2
TCGA-RD-A7BS-01A 46 years, male, white, stage:Stage IIIA, dead, 336 days 3182.4
TCGA-D7-8573-01A 57 years, male, white, stage:Stage IIA, alive, 593 days 3166.0
TCGA-HF-7132-01A male, stage:Stage II, alive, 2351 days 3144.5
TCGA-FP-8209-01A 49 years, male, white, stage:Stage IB, dead, 1811 days 3144.4
TCGA-CG-4444-01A 76 years, male, stage:Stage IIIA, alive, 1431 days 3132.4
TCGA-BR-A4J6-01A 69 years, female, white, stage:Stage IIA, alive, 20 days 3117.7
TCGA-HU-A4GQ-01A 71 years, male, asian, stage:Stage IIIC, dead, 3 days 3114.6
TCGA-VQ-A922-01A 70 years, male, stage:Stage IV, dead, 275 days 3099.5
TCGA-D7-A74A-01A 61 years, female, white, stage:Stage IIIA, alive, 607 days 3088.2
TCGA-HU-A4H4-01A 53 years, female, asian, stage:Stage IIB, alive, 725 days 3043.1
TCGA-CG-5726-01A 73 years, male, stage:Stage IA, dead, 881 days 3000.3
TCGA-HU-A4G9-01A 67 years, female, asian, stage:Stage IA, alive, 736 days 2964.1
TCGA-VQ-A924-01A 69 years, male, stage:Stage II, dead, 1686 days 2953.1
TCGA-R5-A805-01A 71 years, male, white, stage:Stage IIIB, dead, 281 days 2937.9
TCGA-B7-A5TJ-01A 74 years, male, white, stage:Stage IIB, alive, 335 days 2928.9
TCGA-D7-6527-01A 62 years, male, white, stage:Stage II, dead, 312 days 2923.2
TCGA-BR-8361-01A 71 years, female, white, stage:Stage IIIC, alive, 946 days 2901.3
TCGA-BR-8592-01A 63 years, female, white, stage:Stage IIIB, dead, 191 days 2896.9
TCGA-BR-A4CS-01A 77 years, male, white, stage:Stage IIIC, dead, 45 days 2880.4
TCGA-BR-A4IV-01A 47 years, male, asian, stage:Stage IIIB, dead, 869 days 2876.1
TCGA-BR-8676-01A 59 years, male, white, stage:Stage IIIB, alive, 229 days 2871.4
TCGA-D7-8579-01A 66 years, female, white, stage:Stage IIB, alive, 636 days 2860.4
TCGA-IN-7808-01A 59 years, male, white, stage:'--, dead, 105 days 2859.7
TCGA-R5-A7ZF-01A 65 years, female, black or african american, stage:Stage IV, dead, 259 days 2858.4
TCGA-HU-8238-01A 56 years, male, asian, stage:'--, alive, 46 days 2855.9
TCGA-D7-6519-01A 64 years, female, white, stage:'--, alive, 625 days 2830.2
TCGA-CD-A489-01A 58 years, male, asian, stage:Stage IIA, dead, 344 days 2803.8
TCGA-BR-8678-01A 76 years, male, white, stage:Stage IB, alive, 754 days 2781.0
TCGA-HJ-7597-01A 71 years, female, white, stage:Stage IB, dead, 805 days 2767.5
TCGA-D7-A747-01A 57 years, male, white, stage:Stage IIB, dead, 255 days 2746.6
TCGA-IP-7968-01A 74 years, male, white, stage:Stage IIIB, alive, 77 days 2729.4
TCGA-HU-A4GT-01A 71 years, female, asian, stage:Stage IIA, alive, 198 days 2727.4
TCGA-BR-8483-01A 59 years, male, white, stage:Stage IIIA, alive, 164 days 2719.0
TCGA-VQ-A8E3-01A 79 years, male, white, stage:Stage IIA, dead, 661 days 2702.6
TCGA-SW-A7EA-01A 61 years, female, white, stage:Stage IB, alive, 579 days 2652.8
TCGA-IN-AB1X-01A 78 years, female, white, stage:Stage IIA, alive, 411 days 2638.3
TCGA-HU-A4H2-01A 58 years, female, asian, stage:Stage IIIB, alive, 394 days 2634.4
TCGA-CG-4477-01A 58 years, female, stage:Stage IB, alive, 942 days 2590.3
TCGA-BR-8371-01A 62 years, male, white, stage:Stage IIIB, dead, 359 days 2574.3
TCGA-RD-A8N2-01A 59 years, female, white, stage:Stage IB, alive, 3540 days 2528.3
TCGA-KB-A93H-01A 79 years, female, asian, stage:Stage IIB, alive, 1145 days 2506.6
TCGA-IN-8462-01A 80 years, male, white, stage:Stage IIB, alive, 572 days 2497.6
TCGA-HU-A4GU-01A 73 years, male, asian, stage:Stage IIB, alive, 200 days 2463.0
TCGA-BR-A4J8-01A 71 years, female, white, stage:Stage IIIB, alive, 411 days 2422.3
TCGA-VQ-A91Z-01A 67 years, female, white, stage:Stage IIIA, alive, 1690 days 2403.8
TCGA-VQ-AA69-01A 35 years, male, white, stage:Stage IIIA, alive, 864 days 2392.2
TCGA-HU-A4GJ-01A 60 years, female, asian, stage:Stage IIIC, alive, 650 days 2369.6
TCGA-BR-A4J4-01A 39 years, male, asian, stage:Stage IIIB, alive, 16 days 2368.9
TCGA-BR-4280-01A 78 years, female, white, stage:Stage III, dead, 201 days 2345.4
TCGA-D7-A4Z0-01A 60 years, female, white, stage:Stage IIB, alive, 449 days 2343.9
TCGA-R5-A7O7-01A 51 years, male, white, stage:Stage IV, alive, 1389 days 2343.5
TCGA-VQ-A8P3-01A 72 years, male, white, stage:Stage IIIA, alive, 1132 days 2333.3
TCGA-VQ-A928-01A 49 years, male, white, stage:Stage IV, dead, 174 days 2332.0
TCGA-HU-A4G8-01A 71 years, female, asian, stage:Stage IIB, alive, 690 days 2324.7
TCGA-VQ-AA6D-01A 52 years, female, stage:Stage IIIA, alive, 521 days 2321.8
TCGA-VQ-A91U-01A 78 years, male, asian, stage:Stage IIIA, dead, 52 days 2304.5
TCGA-HU-A4G3-01A 54 years, male, asian, stage:Stage IIB, alive, 170 days 2271.2
TCGA-BR-7707-01A 69 years, female, white, stage:Stage IB, alive, 1090 days 2218.3
TCGA-BR-A44T-01A 53 years, female, white, stage:Stage IIA, alive, 1038 days 2175.9
TCGA-RD-A8N0-01A 53 years, female, white, stage:Stage IIIB, alive, 1236 days 2141.8
TCGA-BR-A4J9-01A 55 years, male, white, stage:Stage IIA, alive, 14 days 2115.0
TCGA-D7-A6EX-01A 72 years, female, white, stage:Stage IIIA, alive, 344 days 2085.8
TCGA-BR-A4QL-01A 75 years, female, white, stage:Stage IIIB, dead, 491 days 2084.9
TCGA-VQ-A8PP-01A 76 years, male, stage:Stage IV, dead, 712 days 2079.6
TCGA-VQ-A92D-01A 67 years, male, white, stage:Stage IB, alive, 2032 days 2058.9
TCGA-VQ-A8P8-01A 72 years, female, black or african american, stage:Stage IIB, alive, 942 days 2045.9
TCGA-IN-8663-01A 68 years, male, white, stage:Stage IIB, dead, 103 days 2030.5
TCGA-HU-A4GH-01A 75 years, male, asian, stage:Stage IA, alive, 358 days 1982.3
TCGA-CG-4306-01A 90 years, male, stage:Stage IV, dead, 1 days 1981.6
TCGA-CG-4443-01A 68 years, male, stage:Stage IA, alive, 912 days 1936.7
TCGA-VQ-A91N-01A 59 years, female, stage:Stage IV, dead, 570 days 1936.0
TCGA-VQ-A91E-01A 67 years, female, white, stage:Stage IIIB, alive, 664 days 1909.3
TCGA-HU-A4GP-01A 62 years, female, asian, stage:Stage IIA, alive, 273 days 1890.7
TCGA-CG-4460-01A 66 years, female, stage:Stage IV, dead, 669 days 1810.9
TCGA-FP-8211-01A 62 years, male, white, stage:Stage IIB, alive, 413 days 1789.0
TCGA-RD-A8N4-01A 58 years, female, white, stage:Stage IIIA, alive, 2171 days 1781.3
TCGA-CG-5725-01A 72 years, male, stage:Stage IB, dead, 457 days 1724.5
TCGA-CG-5717-01A 58 years, male, stage:Stage II, dead, 212 days 1667.8
TCGA-CG-4466-01A 81 years, female, stage:Stage IB, alive, 577 days 1635.3
TCGA-VQ-A925-01A 66 years, male, white, stage:Stage IIIA, dead, 138 days 1560.7
TCGA-VQ-A91X-01A 74 years, male, white, stage:Stage IIIB, dead, 289 days 1549.8
TCGA-VQ-A927-01A 81 years, male, white, stage:Stage IIIB, dead, 200 days 1437.1
TCGA-IN-AB1V-01A 63 years, male, white, stage:Stage IA, alive, 479 days 1244.4
TCGA-VQ-AA6G-01A 68 years, male, white, stage:Stage IIA, dead, 792 days 1194.3
TCGA-BR-6710-01A 41 years, male, white, stage:Stage IB, alive, 273 days 1177.3
TCGA-IN-A6RJ-01A 64 years, male, white, stage:Stage IA, alive, 379 days 792.6
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STOMACH CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA041602

Antibody CAB020769
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS

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