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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:231.7 nTPM
GTEx:231.7 nTPM
FANTOM5:960.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018122Antibody HPA027478Antibody HPA028386Antibody CAB010337
Squamous epithelial cells Not detectedMediumNot detectedLow





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 231.7
Samples: 156

Max nTPM: 364.2
Min nTPM: 136.4
Std nTPM: 44.6
Median nTPM: 228.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 364.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 362.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 344.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 328.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 327.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 324.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 318.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 318.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 312.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 307.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 306.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 301.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 300.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 295.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 289.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 288.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 282.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 281.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 279.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 278.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 276.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 276.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 276.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 276.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 276.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 274.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 273.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 271.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 270.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 270.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 269.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 269.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 267.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 267.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 266.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 265.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 265.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 262.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 261.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 258.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 257.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 255.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 255.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 253.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 249.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 249.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 249.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 248.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 248.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 248.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 246.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 246.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 246.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 246.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 246.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 246.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 245.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 242.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 242.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 242.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 240.8
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 239.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 239.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 239.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 238.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 238.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 238.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 237.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 235.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 234.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 231.8
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 231.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 230.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 230.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 229.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 228.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 228.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 228.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 227.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 227.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 226.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 225.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 225.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 225.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 224.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 224.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 223.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 223.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 222.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 222.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 221.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 221.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 221.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 220.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 219.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 217.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 217.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 217.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 216.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 215.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 212.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 211.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 210.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 210.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 210.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 209.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 209.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 209.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 208.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 206.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 205.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 205.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 205.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 205.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 204.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 203.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 203.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 202.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 201.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 201.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 200.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 199.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 198.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 198.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 195.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 194.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 193.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 193.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 192.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 190.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 188.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 188.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 187.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 186.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 185.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 181.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 181.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 176.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 176.5
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 175.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 174.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 174.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 173.6
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 171.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 168.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 165.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 165.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 158.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 157.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 156.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 156.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 152.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 147.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 145.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 144.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 136.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

960.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 960.8
FF:10204-103F6 68 years, female 960.8

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