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RPL6
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  • RPL6
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:591.4 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:594.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068418
Glial cells Not detected
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

591.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 591.4
Samples: 246

Max nTPM: 1354.2
Min nTPM: 364.7
Std nTPM: 155.3
Median nTPM: 559.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1354.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1192.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1081.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1055.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1048.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1014.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 990.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 987.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 985.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 971.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 961.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 941.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 910.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 902.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 888.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 885.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 882.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 876.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 871.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 871.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 854.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 823.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 789.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 779.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 775.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 772.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 761.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 755.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 744.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 739.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 736.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 736.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 733.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 724.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 719.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 714.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 708.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 707.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 704.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 703.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 702.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 700.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 694.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 688.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 684.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 684.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 683.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 681.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 677.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 674.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 673.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 673.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 666.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 663.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 662.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 661.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 661.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 660.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 656.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 655.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 655.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 654.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 650.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 650.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 647.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 647.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 645.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 643.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 643.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 642.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 642.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 638.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 638.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 631.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 628.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 625.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 622.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 621.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 621.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 620.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 618.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 616.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 616.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 616.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 616.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 616.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 615.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 615.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 614.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 612.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 611.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 610.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 606.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 605.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 604.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 598.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 596.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 596.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 596.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 594.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 594.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 594.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 593.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 590.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 590.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 589.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 586.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 581.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 580.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 577.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 574.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 572.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 571.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 568.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 567.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 567.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 566.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 565.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 565.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 565.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 562.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 561.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 559.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 559.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 559.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 559.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 553.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 552.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 551.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 550.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 548.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 545.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 542.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 540.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 537.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 537.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 535.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 535.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 534.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 534.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 533.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 532.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 531.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 530.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 529.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 529.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 529.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 528.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 528.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 526.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 526.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 524.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 523.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 523.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 522.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 522.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 521.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 521.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 520.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 519.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 517.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 517.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 516.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 514.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 513.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 512.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 510.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 509.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 509.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 509.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 508.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 508.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 506.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 504.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 502.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 499.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 498.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 497.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 497.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 497.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 496.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 494.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 492.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 492.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 492.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 488.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 485.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 485.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 485.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 485.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 483.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 483.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 480.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 480.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 479.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 478.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 477.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 476.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 475.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 474.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 469.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 468.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 467.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 464.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 463.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 462.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 460.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 458.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 455.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 454.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 454.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 451.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 449.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 447.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 446.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 446.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 442.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 442.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 442.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 441.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 437.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 437.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 435.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 426.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 426.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 422.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 411.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 408.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 407.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 404.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 400.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 398.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 396.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 396.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 392.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 390.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 384.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 384.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 384.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 382.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 382.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 380.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 375.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 375.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 371.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 364.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 35.2
FF:10164-103B2 76 years, female 35.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

594.4
Pig sample Sample description nTPM
Caudate
nTPM: 594.5
Samples: 4

Max nTPM: 639.2
Min nTPM: 512.6
Sample A Female 631.3
Sample B Female 594.7
Sample C Male 639.2
Sample D Male 512.6

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