We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL6
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL6
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:835.8 nTPM
HPA Brain:441.0 nTPM
GTEx:835.8 nTPM
FANTOM5:27.6 Scaled Tags Per Million
Pig:1009.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

441.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 356.6
2565 Male, age 75, midline 442.1
1981 Female, age 72, midline 395.6
2048 Male, age 55, midline 329.7
2194 Female, age 79, both hemispheres 323.1
2816 Male, age 47, midline 292.4
Cervical spinal cord, dorsal horn
nTPM: 349.5
2173 Female, age 72, unknown 465.9
2069 Male, age 47, both hemispheres 400.7
2296 Male, age 66, both hemispheres 391.5
1877 Male, age 55, unknown 347.4
2721 Male, age 90, both hemispheres 248.4
2297 Male, age 75, both hemispheres 242.9
Cervical spinal cord, ventral horn
nTPM: 441.0
2480 Male, age 75, both hemispheres 596.7
2809 Male, age 90, both hemispheres 521.7
2098 Female, age 72, unknown 461.2
2295 Male, age 66, both hemispheres 415.0
2068 Male, age 55, unknown 380.0
2820 Female, age 79, both hemispheres 271.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

835.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 835.8
Samples: 159

Max nTPM: 1537.9
Min nTPM: 408.4
Std nTPM: 237.9
Median nTPM: 811.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1537.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1508.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1495.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1388.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1386.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1365.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1335.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1310.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1292.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1241.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1230.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1191.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1190.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1177.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1168.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1154.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1152.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1143.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1119.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1111.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1108.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1103.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1094.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1081.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1075.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1073.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1067.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1066.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1063.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1058.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1052.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1045.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1026.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1025.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1015.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1014.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1011.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1010.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1009.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 997.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 992.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 988.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 973.4
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 967.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 967.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 963.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 948.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 938.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 931.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 925.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 913.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 912.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 911.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 903.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 902.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 898.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 894.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 890.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 888.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 876.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 873.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 872.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 868.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 863.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 861.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 851.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 847.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 846.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 844.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 844.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 843.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 830.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 829.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 827.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 817.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 816.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 815.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 811.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 811.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 811.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 805.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 798.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 796.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 793.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 792.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 788.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 787.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 781.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 778.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 777.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 777.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 766.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 760.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 759.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 757.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 755.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 743.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 734.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 730.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 714.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 705.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 704.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 703.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 701.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 700.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 699.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 697.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 695.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 695.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 694.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 692.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 681.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 677.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 675.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 674.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 664.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 663.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 663.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 659.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 654.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 649.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 647.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 639.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 639.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 638.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 635.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 631.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 626.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 622.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 622.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 616.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 601.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 597.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 597.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 594.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 589.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 584.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 584.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 580.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 575.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 570.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 562.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 561.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 556.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 556.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 550.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 549.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 529.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 524.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 511.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 510.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 499.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 496.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 483.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 459.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 452.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 433.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 426.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 408.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 27.6
FF:10181-103D1 60 years, female 31.0
FF:10159-103A6 76 years, female 24.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1009.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 1009.6
Samples: 4

Max nTPM: 1338.0
Min nTPM: 745.3
Sample A Female 745.3
Sample B Female 1171.3
Sample C Male 1338.0
Sample D Male 783.9
Ventral spinal cord
nTPM: 922.4
Samples: 4

Max nTPM: 1015.6
Min nTPM: 743.1
Sample A Female 743.1
Sample B Female 1015.6
Sample C Male 963.1
Sample D Male 967.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org